| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16766890
Identifier: 16766890
GI number: 16766890
Start: 3777236
End: 3778825
Strand: Reverse
Name: 16766890
Synonym: STM3604
Alternate gene names: NA
Gene position: 3778825-3777236 (Counterclockwise)
Preceding gene: 16766892
Following gene: 16766888
Centisome position: 77.79
GC content: 56.6
Gene sequence:
>1590_bases ATGACGAATAGCGCTTCGCAGGCGACACGCGCGCCTTTTGAACATAGCCTGGGGATTATCCGCCAGGCATCAATAGAAAT CCTGCTGCTGCTGGGTATTCATACCACAGAGGGAAAAGAGCCCCGGTGGTTCATGGAACAACTTGAGCAGGCGCGTCTTA ACCTGGGCGGTTGGGGCGCGGTGGCGAAAAAATTGCGGATAAATGACGCGCAGTTGAGCCAGTTTATGCTGCAACTGCGT CACCTTCAGCAGCATGTTCCCCAGTATGACAGCGGGCAAGAGGTGAGCGAAAATCAACTCCTTGCCGCGTTGCGTTTTGT CACCTCGCTGGAGCATCTACGTCAGCAGCAGCCGCTACTGACGTATCAAACTGAGCTGGAAGAACCCGACCAGGAGGCGC ATCTTGAGGCGCAGCGTCAGCTTCGGGCGATAGAACTGACGTTAAAAGCGCTTATTGCGCGCGCATGGCCGGATCGGGCG TCGCTGAATCACTACCTCAAGCAACATTTCGGCCCGGACCGTTTGCGCCAGTGGTTAAAACAGGGAGAAGATCAACATGC GCTGGAGGGCATGTTGTTCAGCGAACTGGCGCTTATGGTGGTCGATAAAAAATTGTTTGCCCGTCATTACGTCAGAATTT TTAATGATGCCTCAGCGTTAACGCTGTTCGCCGAGTCGCGCACCACTCTGCGTATGTTTCTGGATGATTGCCGCCTTGCG CGAAACGAGGTTATCGCCAGGCAGCCGCTTACCTCAGCGCAGCTTATGCTGCTAAACGTTCAGTATCAGCAAATCGTTCG GCCCATCCAGCGCGCCTATGCCGAAAAACGTACCCGCGTGAATCCCGCTTCGTTTCTGCTGGCGGATGAACGTGAATTGC GCCAGTTCTGGGAAACCGCGCGGCTTAAAGATCGGCAGGCCGGGGGAGATAAGCATGAGATTAGCGAGAGCATAGAACCA CCGCGTAAGCGGCCTCCGCGTACGCCTGAAGAGCGTGAGCAACTTATTTCCGGCGCTTTGTGGGGCGCGGTTGGCGTCAT GACGCTGGCGATACTGGCGGGCGCGTTCTGGCTATTTAGTTCGTCGTCGCCAGGCTCCGATAACGGGCAAGCTCCCGCAA TGGCGCAGGATGAACCGCCGCGCGAGGCGCCTTCCGCGCGGGAAACGCTCAATCATATGGGGATTACCTGGGATGCGTTT ACCATGCGGGCGGCGATAGAGCGCAATGATACGCGGGTGACGGCGCTGTTCCTCCAGGGCGGAATGAACTGGCAGCTCGC GTGGACGGAGCAGGCGTTTGCGGCAGGACATACCGAGGTGCTGCAACTGTTGTTGCGTTATCCCGCGCTGATGGATGAGG TCAAACCCTGCCGACGATTTATCACAACGTTAAGTCATGACATGTCGAGCGGCGCGCCGCTGACCGCGATGCATAAAACC TATTTGCAAACGTTTTGCACCGTTCCGGCTGTTGTGACGCGCCAGCAGCACGATACGGAGCAGGCCCGATTGCGCGCTCA GGCCCGGCCCAGCGCAGACAATAAAAAATGGCTGAAAATTCAGTCAGCCATTTATGATGCGATTCACTGA
Upstream 100 bases:
>100_bases TTAAGTCACTGAAATGTGGCTAAATCTGTTATATCTATGAAAAAACATAATTAAAAGAAAACGAAGATCTCGTCGCGGGA TCGTCTTTTTAGGGAAGATA
Downstream 100 bases:
>100_bases GGCCGGAGCAGGTTAAGGCTCTCCGTAAAGGCCAATCAGGCGGCGCACCACGCCATTGGTCCAGCCGAACCCGTCCTGTA GCGGATACTCGCCCCCGCCG
Product: inner membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 529; Mature: 528
Protein sequence:
>529_residues MTNSASQATRAPFEHSLGIIRQASIEILLLLGIHTTEGKEPRWFMEQLEQARLNLGGWGAVAKKLRINDAQLSQFMLQLR HLQQHVPQYDSGQEVSENQLLAALRFVTSLEHLRQQQPLLTYQTELEEPDQEAHLEAQRQLRAIELTLKALIARAWPDRA SLNHYLKQHFGPDRLRQWLKQGEDQHALEGMLFSELALMVVDKKLFARHYVRIFNDASALTLFAESRTTLRMFLDDCRLA RNEVIARQPLTSAQLMLLNVQYQQIVRPIQRAYAEKRTRVNPASFLLADERELRQFWETARLKDRQAGGDKHEISESIEP PRKRPPRTPEEREQLISGALWGAVGVMTLAILAGAFWLFSSSSPGSDNGQAPAMAQDEPPREAPSARETLNHMGITWDAF TMRAAIERNDTRVTALFLQGGMNWQLAWTEQAFAAGHTEVLQLLLRYPALMDEVKPCRRFITTLSHDMSSGAPLTAMHKT YLQTFCTVPAVVTRQQHDTEQARLRAQARPSADNKKWLKIQSAIYDAIH
Sequences:
>Translated_529_residues MTNSASQATRAPFEHSLGIIRQASIEILLLLGIHTTEGKEPRWFMEQLEQARLNLGGWGAVAKKLRINDAQLSQFMLQLR HLQQHVPQYDSGQEVSENQLLAALRFVTSLEHLRQQQPLLTYQTELEEPDQEAHLEAQRQLRAIELTLKALIARAWPDRA SLNHYLKQHFGPDRLRQWLKQGEDQHALEGMLFSELALMVVDKKLFARHYVRIFNDASALTLFAESRTTLRMFLDDCRLA RNEVIARQPLTSAQLMLLNVQYQQIVRPIQRAYAEKRTRVNPASFLLADERELRQFWETARLKDRQAGGDKHEISESIEP PRKRPPRTPEEREQLISGALWGAVGVMTLAILAGAFWLFSSSSPGSDNGQAPAMAQDEPPREAPSARETLNHMGITWDAF TMRAAIERNDTRVTALFLQGGMNWQLAWTEQAFAAGHTEVLQLLLRYPALMDEVKPCRRFITTLSHDMSSGAPLTAMHKT YLQTFCTVPAVVTRQQHDTEQARLRAQARPSADNKKWLKIQSAIYDAIH >Mature_528_residues TNSASQATRAPFEHSLGIIRQASIEILLLLGIHTTEGKEPRWFMEQLEQARLNLGGWGAVAKKLRINDAQLSQFMLQLRH LQQHVPQYDSGQEVSENQLLAALRFVTSLEHLRQQQPLLTYQTELEEPDQEAHLEAQRQLRAIELTLKALIARAWPDRAS LNHYLKQHFGPDRLRQWLKQGEDQHALEGMLFSELALMVVDKKLFARHYVRIFNDASALTLFAESRTTLRMFLDDCRLAR NEVIARQPLTSAQLMLLNVQYQQIVRPIQRAYAEKRTRVNPASFLLADERELRQFWETARLKDRQAGGDKHEISESIEPP RKRPPRTPEEREQLISGALWGAVGVMTLAILAGAFWLFSSSSPGSDNGQAPAMAQDEPPREAPSARETLNHMGITWDAFT MRAAIERNDTRVTALFLQGGMNWQLAWTEQAFAAGHTEVLQLLLRYPALMDEVKPCRRFITTLSHDMSSGAPLTAMHKTY LQTFCTVPAVVTRQQHDTEQARLRAQARPSADNKKWLKIQSAIYDAIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60354; Mature: 60223
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNSASQATRAPFEHSLGIIRQASIEILLLLGIHTTEGKEPRWFMEQLEQARLNLGGWGA CCCCCCHHHCCCHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHH VAKKLRINDAQLSQFMLQLRHLQQHVPQYDSGQEVSENQLLAALRFVTSLEHLRQQQPLL HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCE TYQTELEEPDQEAHLEAQRQLRAIELTLKALIARAWPDRASLNHYLKQHFGPDRLRQWLK EEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHH QGEDQHALEGMLFSELALMVVDKKLFARHYVRIFNDASALTLFAESRTTLRMFLDDCRLA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHH RNEVIARQPLTSAQLMLLNVQYQQIVRPIQRAYAEKRTRVNPASFLLADERELRQFWETA HHHHHHCCCCCHHHHHEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHH RLKDRQAGGDKHEISESIEPPRKRPPRTPEEREQLISGALWGAVGVMTLAILAGAFWLFS HHHHHCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SSSPGSDNGQAPAMAQDEPPREAPSARETLNHMGITWDAFTMRAAIERNDTRVTALFLQG CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEHHHHHHHHHHCCCCEEEEEEEEC GMNWQLAWTEQAFAAGHTEVLQLLLRYPALMDEVKPCRRFITTLSHDMSSGAPLTAMHKT CCCEEEEECHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH YLQTFCTVPAVVTRQQHDTEQARLRAQARPSADNKKWLKIQSAIYDAIH HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TNSASQATRAPFEHSLGIIRQASIEILLLLGIHTTEGKEPRWFMEQLEQARLNLGGWGA CCCCCHHHCCCHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHH VAKKLRINDAQLSQFMLQLRHLQQHVPQYDSGQEVSENQLLAALRFVTSLEHLRQQQPLL HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCE TYQTELEEPDQEAHLEAQRQLRAIELTLKALIARAWPDRASLNHYLKQHFGPDRLRQWLK EEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHH QGEDQHALEGMLFSELALMVVDKKLFARHYVRIFNDASALTLFAESRTTLRMFLDDCRLA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHH RNEVIARQPLTSAQLMLLNVQYQQIVRPIQRAYAEKRTRVNPASFLLADERELRQFWETA HHHHHHCCCCCHHHHHEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHH RLKDRQAGGDKHEISESIEPPRKRPPRTPEEREQLISGALWGAVGVMTLAILAGAFWLFS HHHHHCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SSSPGSDNGQAPAMAQDEPPREAPSARETLNHMGITWDAFTMRAAIERNDTRVTALFLQG CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEHHHHHHHHHHCCCCEEEEEEEEC GMNWQLAWTEQAFAAGHTEVLQLLLRYPALMDEVKPCRRFITTLSHDMSSGAPLTAMHKT CCCEEEEECHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH YLQTFCTVPAVVTRQQHDTEQARLRAQARPSADNKKWLKIQSAIYDAIH HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA