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The map label for this gene is yhhV

Identifier: 16766845

GI number: 16766845

Start: 3728301

End: 3728528

Strand: Reverse

Name: yhhV

Synonym: STM3559

Alternate gene names: 16766845

Gene position: 3728528-3728301 (Counterclockwise)

Preceding gene: 16766846

Following gene: 16766844

Centisome position: 76.76

GC content: 54.39

Gene sequence:

>228_bases
ATGTTTATGCGTACGGTTAACTATAGCGAAGCGCGGCAAAATCTGGCCGAAGTCCTGGAAAGTGCGGTGACGGGGGGGCC
TGTTACCATCACGCGTCGTGGGCATAAGTCCGCAGTGATCATCAGCGCCGAGGAGTTTGAGCGTTATCAGACGGCGCGAA
TGGATGATGAGTTTGCTGCCATTATGGCGGTTCATGGCAATGAGCTCAGGGAGCTGGCGGATAAATGA

Upstream 100 bases:

>100_bases
GCCGCCCCCGGTAACGGCAAGCGGTAAAATTTTTCAAAAGAGCCTGATGGCTCTTTTTTTGTACATGTTTGTTGTACAAT
AAACATGTACAACTGGGGAG

Downstream 100 bases:

>100_bases
CCCTACAACTTATCTCAGCGGAAGAGATAATTCAGTTTCACGACAGGCTTCTCCGCGTTACGCCTGGTGTAACAGGCATG
CCTGATCCTGGCCGCGCGGA

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MFMRTVNYSEARQNLAEVLESAVTGGPVTITRRGHKSAVIISAEEFERYQTARMDDEFAAIMAVHGNELRELADK

Sequences:

>Translated_75_residues
MFMRTVNYSEARQNLAEVLESAVTGGPVTITRRGHKSAVIISAEEFERYQTARMDDEFAAIMAVHGNELRELADK
>Mature_75_residues
MFMRTVNYSEARQNLAEVLESAVTGGPVTITRRGHKSAVIISAEEFERYQTARMDDEFAAIMAVHGNELRELADK

Specific function: A putative antitoxin, however its cognate toxin is unknown

COG id: COG2161

COG function: function code D; Antitoxin of toxin-antitoxin stability system

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YefM antitoxin family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YEFM_SALTY (P40819)

Other databases:

- EMBL:   AE006468
- EMBL:   D12589
- RefSeq:   NP_462460.1
- ProteinModelPortal:   P40819
- SMR:   P40819
- GeneID:   1255082
- GenomeReviews:   AE006468_GR
- KEGG:   stm:STM3559
- HOGENOM:   HBG665623
- OMA:   QARANIS
- ProtClustDB:   CLSK894820
- BioCyc:   STYP99287:STM3559-MONOMER
- InterPro:   IPR006442
- TIGRFAMs:   TIGR01552

Pfam domain/function: PF02604 PhdYeFM

EC number: NA

Molecular weight: Translated: 8431; Mature: 8431

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMRTVNYSEARQNLAEVLESAVTGGPVTITRRGHKSAVIISAEEFERYQTARMDDEFAA
CCEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEHHHHHHHHHHCCCCHHHH
IMAVHGNELRELADK
HHHHCCHHHHHHHCC
>Mature Secondary Structure
MFMRTVNYSEARQNLAEVLESAVTGGPVTITRRGHKSAVIISAEEFERYQTARMDDEFAA
CCEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEHHHHHHHHHHCCCCHHHH
IMAVHGNELRELADK
HHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609; 1429514; 7920643