Definition Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome.
Accession NC_003197
Length 4,857,432

Click here to switch to the map view.

The map label for this gene is yhhA [H]

Identifier: 16766838

GI number: 16766838

Start: 3722330

End: 3722746

Strand: Direct

Name: yhhA [H]

Synonym: STM3552

Alternate gene names: 16766838

Gene position: 3722330-3722746 (Clockwise)

Preceding gene: 16766836

Following gene: 16766851

Centisome position: 76.63

GC content: 53.48

Gene sequence:

>417_bases
ATGAAACGCTTACTACTTATTACGGCTTTGTTACCCTTTGCTGTATTGGCCCAGCCAATTAACACTATGAATAATCCTAA
TCAGCCAGGTTATCAGATCCCCAGCCAGCAGCGTATGCAGACGCAGATGCAAACGCAGCAGATTCAGCAGCAGGGTATGT
TGAAACAACAGATGCAAACGCAGGCGCGCAGCCAGCAGCAAAATCTACAGTCGCAGTTGAATGCCAATACGCAGCGGGTT
CAGCAGGGACAGCCGGGCAACGGTATGCTCGGTCAGCAAACGCTGCCCAATACGCAGGGCGGAATGCTCAGCGGCAGTGG
AAATCCGGACCGGATGCTAAACCATTCCCAGCCAATGTTGCAGCAGGACAGCGGGACGCCGCAGCCTGACATCCCGCTGA
AAACCATCAGCCCTTAA

Upstream 100 bases:

>100_bases
TGTATGTCCCGTTTAATCCTGGCCCACAACGCTTAAAAAATCATCATCATGGCGAAATAGAGGTACACTTAAAAAGAGGC
CTCATCGGGAGGAGACGACA

Downstream 100 bases:

>100_bases
AACTGACGGCCCTTAAAACTGAAAGTGAGGGCCGATGTCATCAATGCGATCGGTGCAGATACAATCCACGCCCCAGCGCA
GCAGCTCTGCCGCCCGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: ORFQ [H]

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MKRLLLITALLPFAVLAQPINTMNNPNQPGYQIPSQQRMQTQMQTQQIQQQGMLKQQMQTQARSQQQNLQSQLNANTQRV
QQGQPGNGMLGQQTLPNTQGGMLSGSGNPDRMLNHSQPMLQQDSGTPQPDIPLKTISP

Sequences:

>Translated_138_residues
MKRLLLITALLPFAVLAQPINTMNNPNQPGYQIPSQQRMQTQMQTQQIQQQGMLKQQMQTQARSQQQNLQSQLNANTQRV
QQGQPGNGMLGQQTLPNTQGGMLSGSGNPDRMLNHSQPMLQQDSGTPQPDIPLKTISP
>Mature_138_residues
MKRLLLITALLPFAVLAQPINTMNNPNQPGYQIPSQQRMQTQMQTQQIQQQGMLKQQMQTQARSQQQNLQSQLNANTQRV
QQGQPGNGMLGQQTLPNTQGGMLSGSGNPDRMLNHSQPMLQQDSGTPQPDIPLKTISP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789857, Length=147, Percent_Identity=66.6666666666667, Blast_Score=119, Evalue=6e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020158
- ProDom:   PD059127 [H]

Pfam domain/function: PF10956 DUF2756 [H]

EC number: NA

Molecular weight: Translated: 15300; Mature: 15300

Theoretical pI: Translated: 11.54; Mature: 11.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.2 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLLLITALLPFAVLAQPINTMNNPNQPGYQIPSQQRMQTQMQTQQIQQQGMLKQQMQT
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QARSQQQNLQSQLNANTQRVQQGQPGNGMLGQQTLPNTQGGMLSGSGNPDRMLNHSQPML
HHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHCCCCCCH
QQDSGTPQPDIPLKTISP
HCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRLLLITALLPFAVLAQPINTMNNPNQPGYQIPSQQRMQTQMQTQQIQQQGMLKQQMQT
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QARSQQQNLQSQLNANTQRVQQGQPGNGMLGQQTLPNTQGGMLSGSGNPDRMLNHSQPML
HHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHCCCCCCH
QQDSGTPQPDIPLKTISP
HCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1851953; 8041620; 9278503 [H]