| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is pstS1 [H]
Identifier: 16766815
GI number: 16766815
Start: 3690841
End: 3692400
Strand: Reverse
Name: pstS1 [H]
Synonym: STM3528
Alternate gene names: 16766815
Gene position: 3692400-3690841 (Counterclockwise)
Preceding gene: 16766816
Following gene: 16766814
Centisome position: 76.02
GC content: 50.96
Gene sequence:
>1560_bases ATGGGTGGGCTCAGGACTACCGGGTTTATACTTCCGTTATCGCAGGGATTAGCGGATAGAAAAATGAAAAATGCTAATTG GCTTTTTTTGTCAATCATAATGGCGTTTATCGGCGTGCCGCTGCTGGTGAACATTATTACGATTATCGTGGGGGGAATGT GGGCGTACATTAGCGTTCTTGAAAATAGTATCCCCGTCGCGCGATCTATTGAGGAGGCGACCATTATCCCGGTAGCGCTT CTGGGCGCAGGGTTAATTTTTCTTTGTGGCCGGATATGGGGAAAGGGAAATGCATCAGAGGTAAATCCAGAATGGCGTGA TTGCTGCCTGCTTATGCCCGCTCTGGTGGTGCTGATGGGGTGGGTCATCCTGATGTTTCTCACCGATCTTAATATTCGCG CGATAGGGTGTAAGCCCATCGCCCAGGTGGTGCAAACGCTTTGGTTAGTACCCCGCGTAATATCCTTTTTCAACGGCTGG GTATGGGCAGTGTTGCTCATCCCGGTTGGCTCGCAGCTCTGTTTTGCATTAGGGTATGGCGGTGCGCGTTGGGGAGTGCT ACGCGGCGGTGCGGGCTACACTTGTCGTAACCTGCTGGTGATTTGCCTGCTGTTTTTCGGGAGCTGTGCCGTATACCAGT CACATCTTTATGCCGTGAAGTATCCCGCTCCCGAGAGCAGTGAATATCTTTATTTCCGCGATTATCAGGCGCACACATGG GGCAACAAGCTAACCGGGCTGCGCGATGAACCGACACTTTTGCTCACTCAAAATTGGCCGCGGCTCGATGGCGCAACGGC TGGCTTGCCGTTATACGCCTCGGCTTTTTATGCGCTTACGCGCTTTCCGGATGATATCTGCCCTGAAGACTACCTTGAAA ACCAGGGAACCATTGAAGCCTATCAAAATATCCTTAACGGTAATGCCGATCTTATTTTTGTCGCCCAGCCTTCCACTGCT CAAAAGCAATTGGCCGAGGCCAGTGGCGTAAAACTGGTTTACACCCCCTTTGCACGTGAAGCGTTTGTGTTTATCGTCAA CCAAAACAATCCCGTGTCATCGTTGAGTGATGTACAAATTCGCGGCATTTTTAGCGGAAGAATCACCCACTGGAATGAGG TGGGCGGAGAGGCAATCGACATTAAGCCCTGGCAGCGACCGGAAAACTCTGGCAGCCAAACGGCGATGCTGGCGAAGGTA ATGAAAGAAACGAAGCTGATGCCAGCGCAAACAACATCAGTGGCAACCGCGATGGGGGATATGGTGGATATCGTGGCTGA GTATCGCAATACGCACAACGCCATTGGCTATACCTTTCGTTATTACGCTACGCAGATGCACAGCAATAAAGAGATTAAAT TACTGGCGATAAACGATGTTGCGCCGACGGTTGAAAATATTCGTAACGGCAGTTACCCGTACACGGTTGATGTTTATATG GTCACCCGTGAACACCCCACAGCGGAAACACAAAAGCTGGTGGACTGGTTTCTAAGCCCGCAGGGACAACAGTTGGTGCA GGATGTGGGATATGTGCCGCTGTATCCGGCCGCGAAATAA
Upstream 100 bases:
>100_bases AGGTTAATGTGAGCCTGTAAATAAAAAACGGCAGCCGGAACTTTCAACTTCTGTCTGCCGCTATCGTGAATGTTTTAACG TCGCGATTTCAGAAAAATGC
Downstream 100 bases:
>100_bases AGGGACTAAATGGAAGAGGTTAAATTATATGTGGAACGGGTTGGCATAGACCCGGCCAGCGGCGCTGATATTCGTATTGC ACGGCGTGAATCCACTTCGT
Product: periplasmic phosphate-binding protein
Products: NA
Alternate protein names: PBP 1 [H]
Number of amino acids: Translated: 519; Mature: 518
Protein sequence:
>519_residues MGGLRTTGFILPLSQGLADRKMKNANWLFLSIIMAFIGVPLLVNIITIIVGGMWAYISVLENSIPVARSIEEATIIPVAL LGAGLIFLCGRIWGKGNASEVNPEWRDCCLLMPALVVLMGWVILMFLTDLNIRAIGCKPIAQVVQTLWLVPRVISFFNGW VWAVLLIPVGSQLCFALGYGGARWGVLRGGAGYTCRNLLVICLLFFGSCAVYQSHLYAVKYPAPESSEYLYFRDYQAHTW GNKLTGLRDEPTLLLTQNWPRLDGATAGLPLYASAFYALTRFPDDICPEDYLENQGTIEAYQNILNGNADLIFVAQPSTA QKQLAEASGVKLVYTPFAREAFVFIVNQNNPVSSLSDVQIRGIFSGRITHWNEVGGEAIDIKPWQRPENSGSQTAMLAKV MKETKLMPAQTTSVATAMGDMVDIVAEYRNTHNAIGYTFRYYATQMHSNKEIKLLAINDVAPTVENIRNGSYPYTVDVYM VTREHPTAETQKLVDWFLSPQGQQLVQDVGYVPLYPAAK
Sequences:
>Translated_519_residues MGGLRTTGFILPLSQGLADRKMKNANWLFLSIIMAFIGVPLLVNIITIIVGGMWAYISVLENSIPVARSIEEATIIPVAL LGAGLIFLCGRIWGKGNASEVNPEWRDCCLLMPALVVLMGWVILMFLTDLNIRAIGCKPIAQVVQTLWLVPRVISFFNGW VWAVLLIPVGSQLCFALGYGGARWGVLRGGAGYTCRNLLVICLLFFGSCAVYQSHLYAVKYPAPESSEYLYFRDYQAHTW GNKLTGLRDEPTLLLTQNWPRLDGATAGLPLYASAFYALTRFPDDICPEDYLENQGTIEAYQNILNGNADLIFVAQPSTA QKQLAEASGVKLVYTPFAREAFVFIVNQNNPVSSLSDVQIRGIFSGRITHWNEVGGEAIDIKPWQRPENSGSQTAMLAKV MKETKLMPAQTTSVATAMGDMVDIVAEYRNTHNAIGYTFRYYATQMHSNKEIKLLAINDVAPTVENIRNGSYPYTVDVYM VTREHPTAETQKLVDWFLSPQGQQLVQDVGYVPLYPAAK >Mature_518_residues GGLRTTGFILPLSQGLADRKMKNANWLFLSIIMAFIGVPLLVNIITIIVGGMWAYISVLENSIPVARSIEEATIIPVALL GAGLIFLCGRIWGKGNASEVNPEWRDCCLLMPALVVLMGWVILMFLTDLNIRAIGCKPIAQVVQTLWLVPRVISFFNGWV WAVLLIPVGSQLCFALGYGGARWGVLRGGAGYTCRNLLVICLLFFGSCAVYQSHLYAVKYPAPESSEYLYFRDYQAHTWG NKLTGLRDEPTLLLTQNWPRLDGATAGLPLYASAFYALTRFPDDICPEDYLENQGTIEAYQNILNGNADLIFVAQPSTAQ KQLAEASGVKLVYTPFAREAFVFIVNQNNPVSSLSDVQIRGIFSGRITHWNEVGGEAIDIKPWQRPENSGSQTAMLAKVM KETKLMPAQTTSVATAMGDMVDIVAEYRNTHNAIGYTFRYYATQMHSNKEIKLLAINDVAPTVENIRNGSYPYTVDVYMV TREHPTAETQKLVDWFLSPQGQQLVQDVGYVPLYPAAK
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 57519; Mature: 57388
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGLRTTGFILPLSQGLADRKMKNANWLFLSIIMAFIGVPLLVNIITIIVGGMWAYISVL CCCCCCCCEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENSIPVARSIEEATIIPVALLGAGLIFLCGRIWGKGNASEVNPEWRDCCLLMPALVVLMG HCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH WVILMFLTDLNIRAIGCKPIAQVVQTLWLVPRVISFFNGWVWAVLLIPVGSQLCFALGYG HHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC GARWGVLRGGAGYTCRNLLVICLLFFGSCAVYQSHLYAVKYPAPESSEYLYFRDYQAHTW CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCEEEEECCCCCCC GNKLTGLRDEPTLLLTQNWPRLDGATAGLPLYASAFYALTRFPDDICPEDYLENQGTIEA CCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHH YQNILNGNADLIFVAQPSTAQKQLAEASGVKLVYTPFAREAFVFIVNQNNPVSSLSDVQI HHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCCCCCCCEEE RGIFSGRITHWNEVGGEAIDIKPWQRPENSGSQTAMLAKVMKETKLMPAQTTSVATAMGD EEEECCCCCCHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH MVDIVAEYRNTHNAIGYTFRYYATQMHSNKEIKLLAINDVAPTVENIRNGSYPYTVDVYM HHHHHHHHHCCCCCCCHHHEEHHHHHCCCCCEEEEEECCCCHHHHHHCCCCCCEEEEEEE VTREHPTAETQKLVDWFLSPQGQQLVQDVGYVPLYPAAK EECCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCC >Mature Secondary Structure GGLRTTGFILPLSQGLADRKMKNANWLFLSIIMAFIGVPLLVNIITIIVGGMWAYISVL CCCCCCCEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENSIPVARSIEEATIIPVALLGAGLIFLCGRIWGKGNASEVNPEWRDCCLLMPALVVLMG HCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH WVILMFLTDLNIRAIGCKPIAQVVQTLWLVPRVISFFNGWVWAVLLIPVGSQLCFALGYG HHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC GARWGVLRGGAGYTCRNLLVICLLFFGSCAVYQSHLYAVKYPAPESSEYLYFRDYQAHTW CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCEEEEECCCCCCC GNKLTGLRDEPTLLLTQNWPRLDGATAGLPLYASAFYALTRFPDDICPEDYLENQGTIEA CCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHH YQNILNGNADLIFVAQPSTAQKQLAEASGVKLVYTPFAREAFVFIVNQNNPVSSLSDVQI HHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCCCCCCCEEE RGIFSGRITHWNEVGGEAIDIKPWQRPENSGSQTAMLAKVMKETKLMPAQTTSVATAMGD EEEECCCCCCHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH MVDIVAEYRNTHNAIGYTFRYYATQMHSNKEIKLLAINDVAPTVENIRNGSYPYTVDVYM HHHHHHHHHCCCCCCCHHHEEHHHHHCCCCCEEEEEECCCCHHHHHHCCCCCCEEEEEEE VTREHPTAETQKLVDWFLSPQGQQLVQDVGYVPLYPAAK EECCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12354221 [H]