| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is fic
Identifier: 16766758
GI number: 16766758
Start: 3620354
End: 3620956
Strand: Reverse
Name: fic
Synonym: STM3470
Alternate gene names: 16766758
Gene position: 3620956-3620354 (Counterclockwise)
Preceding gene: 16766759
Following gene: 16766757
Centisome position: 74.54
GC content: 55.22
Gene sequence:
>603_bases ATGAGCGATAAATTTGGCGAAGGACGCGATCCGTACCTCTATCCGGGGCTGAATGTGATGCGTAATCGGCTGGGGATTCA TCAGGCCCAGCGACTGGCGCAAGCGGCATACGAAATGACCGCGCTCCGCGCCGCTACGATTGAACTGGGGCCGCTGGTAC GCGGCTTGCCTCATCTGTGCGCGATTCATCGCCAGCTCTATCAGGATATTTTCGACTGGGCAGGGCAACTGCGGGAGGTC GATATTTACCAGGGCGATACCCGTTTTTGCCACTTTGCCTATATCGAAAAAGAGGGCAACGCTCTGATGCAGGATCTGGA AGAAGAGGGCTACCTGGTTGGTCTGGCGCACGAGAAGTTTGTCGAGCGGCTGGCGCATTACTACTGTGAAATTAATGTGC TTCATCCGTTTCGTTTTGGGAGCGGGTTGGCGCAGCGCATCTTCTTTGAACAACTGGCGCTACATGCAGGCTACGCGCTG AGTTGGCAAGGTATTGCGGTTGAAACATGGAAGCAGGCGAACCAGAGCGGCGCGATGGGCGATCTCTCCGCTTTGCGGGC GATTTTTCAGAAAGCGATAAGCGAAGCTCGCGAAACTGAGTAA
Upstream 100 bases:
>100_bases AACTTCCAGCAAAGCCGCCGTCTCGAAGGTATTGAGATCCCCTTAGTAACCCTGACTGCCGACGAAGCGCTGGTACGTCT TGACGAGCTTCGGAGGCACT
Downstream 100 bases:
>100_bases AATAGTGCGGTTCTACTCACCCGGAGCCGCCATGATCCTGCTTATCGATAACTATGATTCCTTTACCTGGAACCTCTACC AGTATTTTTGTGAACTGGGC
Product: cell filamentation protein Fic
Products: NA
Alternate protein names: Cell filamentation protein fic
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MSDKFGEGRDPYLYPGLNVMRNRLGIHQAQRLAQAAYEMTALRAATIELGPLVRGLPHLCAIHRQLYQDIFDWAGQLREV DIYQGDTRFCHFAYIEKEGNALMQDLEEEGYLVGLAHEKFVERLAHYYCEINVLHPFRFGSGLAQRIFFEQLALHAGYAL SWQGIAVETWKQANQSGAMGDLSALRAIFQKAISEARETE
Sequences:
>Translated_200_residues MSDKFGEGRDPYLYPGLNVMRNRLGIHQAQRLAQAAYEMTALRAATIELGPLVRGLPHLCAIHRQLYQDIFDWAGQLREV DIYQGDTRFCHFAYIEKEGNALMQDLEEEGYLVGLAHEKFVERLAHYYCEINVLHPFRFGSGLAQRIFFEQLALHAGYAL SWQGIAVETWKQANQSGAMGDLSALRAIFQKAISEARETE >Mature_199_residues SDKFGEGRDPYLYPGLNVMRNRLGIHQAQRLAQAAYEMTALRAATIELGPLVRGLPHLCAIHRQLYQDIFDWAGQLREVD IYQGDTRFCHFAYIEKEGNALMQDLEEEGYLVGLAHEKFVERLAHYYCEINVLHPFRFGSGLAQRIFFEQLALHAGYALS WQGIAVETWKQANQSGAMGDLSALRAIFQKAISEARETE
Specific function: Involved in cell filamentation induced by cyclic AMP
COG id: COG2184
COG function: function code D; Protein involved in cell division
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 fido domain
Homologues:
Organism=Escherichia coli, GI1789761, Length=200, Percent_Identity=86.5, Blast_Score=360, Evalue=1e-101,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FIC_SALTY (P20751)
Other databases:
- EMBL: M32355 - EMBL: AE006468 - RefSeq: NP_462373.1 - ProteinModelPortal: P20751 - SMR: P20751 - PRIDE: P20751 - GeneID: 1254993 - GenomeReviews: AE006468_GR - KEGG: stm:STM3470 - NMPDR: fig|99287.1.peg.3350 - HOGENOM: HBG400904 - OMA: DPYCYPG - ProtClustDB: PRK10347 - BioCyc: STYP99287:STM3470-MONOMER - InterPro: IPR003812
Pfam domain/function: PF02661 Fic
EC number: NA
Molecular weight: Translated: 22781; Mature: 22650
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS51459 FIDO
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKFGEGRDPYLYPGLNVMRNRLGIHQAQRLAQAAYEMTALRAATIELGPLVRGLPHLC CCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIHRQLYQDIFDWAGQLREVDIYQGDTRFCHFAYIEKEGNALMQDLEEEGYLVGLAHEKF HHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEEEECCCHHHHHHHHHCCCEEEEHHHHH VERLAHYYCEINVLHPFRFGSGLAQRIFFEQLALHAGYALSWQGIAVETWKQANQSGAMG HHHHHHHHHHCCEECCCHHCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCCCH DLSALRAIFQKAISEARETE HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDKFGEGRDPYLYPGLNVMRNRLGIHQAQRLAQAAYEMTALRAATIELGPLVRGLPHLC CCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIHRQLYQDIFDWAGQLREVDIYQGDTRFCHFAYIEKEGNALMQDLEEEGYLVGLAHEKF HHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEEEECCCHHHHHHHHHCCCEEEEHHHHH VERLAHYYCEINVLHPFRFGSGLAQRIFFEQLALHAGYALSWQGIAVETWKQANQSGAMG HHHHHHHHHHCCEECCCHHCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCCCH DLSALRAIFQKAISEARETE HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2403545; 11677609