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The map label for this gene is pdhR [C]

Identifier: 16766653

GI number: 16766653

Start: 3525927

End: 3526556

Strand: Reverse

Name: pdhR [C]

Synonym: STM3358

Alternate gene names: 16766653

Gene position: 3526556-3525927 (Counterclockwise)

Preceding gene: 16766654

Following gene: 16766652

Centisome position: 72.6

GC content: 49.05

Gene sequence:

>630_bases
GTGAAAAAGATCCAAAGAACGCAAACCCGCGATCACATTACGCAAATGCTTCGCTATGAAATTCTTTCCGGCAATATAAA
AGCGGGAGAAGAACTCGCGCAGGAAAGTATTGCGGAGCAGCTCGGTCTTTCACGAATGCCGGTTCGAGAAGCGCTACAGT
CACTCGAACAGGAAGGTTTTTTAATCCGACTGCCCAACAGGCACATGCAGGTCGCGCATCTTGAGGCCGATCGCGTGAGT
CATATTTTTCGCGTGATTGCCGCGATGGCCGCCGAAATGTTTTCGCTGATACCCAGCGAAGTAGGCGATGCCCTCCTGAT
ACGTGCGCAAGCGCTGGCTGTCGCAGAAGACAAATCCTGCGAACTGGAGTGTCATGCGATGCTGATTTCTTATGTGAATA
ACCGCTATCTGGAAAAGGTGTATCAGCAGTTCCTGGACGGTTATGTCTCTTATGTTATTTTGCATCTGAAAAAAGATAAT
CAGGAGTCGGCGCAGCTTTTCGCTGAACTGGCTGACGTCATACGCCAGGGGCGGCGTGATGAGATTGGGCAAGTTATGCA
GCGTTATTTCCTCTCTTTAGCAGAAATAATGCGTCAACATATGAAGGATTGGGAAAGTGCAGAAGCCTAA

Upstream 100 bases:

>100_bases
GGGGCTTTTGCTCCGGCTTCTTTGACTGTAAACAAGCCACGAAATCAAGCACTAAATCTGCTAAACTCCTCACGTCTTAT
CGGTTATTAACGAGAACGTC

Downstream 100 bases:

>100_bases
GTTAGGGAAGATTAAGCTTCTTTCAGCGAAAGAACAGGTCGCGGCAGTGCTGCGTAAAGCGATTCTTTCGAGGGAGTTAG
TGGAAGGGCAGGAGATTACG

Product: regulatory protein

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family Protein; GntR-Family Transcriptional Regulator; Transcriptional Regulator GntR Family; Transcription Regulator

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MKKIQRTQTRDHITQMLRYEILSGNIKAGEELAQESIAEQLGLSRMPVREALQSLEQEGFLIRLPNRHMQVAHLEADRVS
HIFRVIAAMAAEMFSLIPSEVGDALLIRAQALAVAEDKSCELECHAMLISYVNNRYLEKVYQQFLDGYVSYVILHLKKDN
QESAQLFAELADVIRQGRRDEIGQVMQRYFLSLAEIMRQHMKDWESAEA

Sequences:

>Translated_209_residues
MKKIQRTQTRDHITQMLRYEILSGNIKAGEELAQESIAEQLGLSRMPVREALQSLEQEGFLIRLPNRHMQVAHLEADRVS
HIFRVIAAMAAEMFSLIPSEVGDALLIRAQALAVAEDKSCELECHAMLISYVNNRYLEKVYQQFLDGYVSYVILHLKKDN
QESAQLFAELADVIRQGRRDEIGQVMQRYFLSLAEIMRQHMKDWESAEA
>Mature_209_residues
MKKIQRTQTRDHITQMLRYEILSGNIKAGEELAQESIAEQLGLSRMPVREALQSLEQEGFLIRLPNRHMQVAHLEADRVS
HIFRVIAAMAAEMFSLIPSEVGDALLIRAQALAVAEDKSCELECHAMLISYVNNRYLEKVYQQFLDGYVSYVILHLKKDN
QESAQLFAELADVIRQGRRDEIGQVMQRYFLSLAEIMRQHMKDWESAEA

Specific function: Transcriptional Repressor For The Pyruvate Dehydrogenase Complex Genes ACEef And Lpd. [C]

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24078; Mature: 24078

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIQRTQTRDHITQMLRYEILSGNIKAGEELAQESIAEQLGLSRMPVREALQSLEQEGF
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
LIRLPNRHMQVAHLEADRVSHIFRVIAAMAAEMFSLIPSEVGDALLIRAQALAVAEDKSC
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ELECHAMLISYVNNRYLEKVYQQFLDGYVSYVILHLKKDNQESAQLFAELADVIRQGRRD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHH
EIGQVMQRYFLSLAEIMRQHMKDWESAEA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKIQRTQTRDHITQMLRYEILSGNIKAGEELAQESIAEQLGLSRMPVREALQSLEQEGF
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
LIRLPNRHMQVAHLEADRVSHIFRVIAAMAAEMFSLIPSEVGDALLIRAQALAVAEDKSC
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ELECHAMLISYVNNRYLEKVYQQFLDGYVSYVILHLKKDNQESAQLFAELADVIRQGRRD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHH
EIGQVMQRYFLSLAEIMRQHMKDWESAEA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA