| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16766576
Identifier: 16766576
GI number: 16766576
Start: 3444196
End: 3444726
Strand: Direct
Name: 16766576
Synonym: STM3278
Alternate gene names: NA
Gene position: 3444196-3444726 (Clockwise)
Preceding gene: 16766574
Following gene: 39546365
Centisome position: 70.91
GC content: 40.11
Gene sequence:
>531_bases ATGAGTGAACCTGCTTCCTTTTTTCTTCATGCACATATTACCGAGAGTAACCTCAAGAAATTTTTCCATTCACCGGCAAC AAATATTAAAGACTATGACGACTGGTTGCCATGGTTTACTGAGGAGCAAAGGTTGTACGGCGATCCTGCAAAAATGCTTA ACAATCTTGCCACATGTAATTCTGGTGAAAGTGAAAAGAATATTTATGCTGAACATATCAACTTTAATAAAGAAACACAG ATAGTCACGATGGATCACATATTTCTCTCAGAGAGCTATGAAATCTTCATGCCACTCATGGCCTGTGTGCGGGGAATCGA GAAATTTATTACGCCAGGGGAAAATAATTTTGCGCTAATTTATTATTACTGGTGGGGTTCGGAGATCGCCATCGCGCTCG AATTTGACGCCAATGGTAGCAGAATAACGGCAAATCCTAAGGCAGAAAATTTAACTATCGCCGATGCTTTTTTCGATGAA CACGGGGAAGCACTCGCCGAAGAACTTTATAATAAACAGGGTTTTATTTGA
Upstream 100 bases:
>100_bases AGAGGAAAGGTCCAGTTCTGTACTTTTATAAAATAGTAATCGTTTTATCATGGCCGAACAGGGATATGAATAAATCGACT TATTACCAGAGAAAATCATC
Downstream 100 bases:
>100_bases TACCATTTCGCGGACTTGTGAAATATTGCCGGATGAAAACAGCTCATCCGGCTCGTTCAATTACTGGTACACCGGCAACA AATTAAAGCTCGATAAAATA
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MSEPASFFLHAHITESNLKKFFHSPATNIKDYDDWLPWFTEEQRLYGDPAKMLNNLATCNSGESEKNIYAEHINFNKETQ IVTMDHIFLSESYEIFMPLMACVRGIEKFITPGENNFALIYYYWWGSEIAIALEFDANGSRITANPKAENLTIADAFFDE HGEALAEELYNKQGFI
Sequences:
>Translated_176_residues MSEPASFFLHAHITESNLKKFFHSPATNIKDYDDWLPWFTEEQRLYGDPAKMLNNLATCNSGESEKNIYAEHINFNKETQ IVTMDHIFLSESYEIFMPLMACVRGIEKFITPGENNFALIYYYWWGSEIAIALEFDANGSRITANPKAENLTIADAFFDE HGEALAEELYNKQGFI >Mature_175_residues SEPASFFLHAHITESNLKKFFHSPATNIKDYDDWLPWFTEEQRLYGDPAKMLNNLATCNSGESEKNIYAEHINFNKETQI VTMDHIFLSESYEIFMPLMACVRGIEKFITPGENNFALIYYYWWGSEIAIALEFDANGSRITANPKAENLTIADAFFDEH GEALAEELYNKQGFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20284; Mature: 20153
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPASFFLHAHITESNLKKFFHSPATNIKDYDDWLPWFTEEQRLYGDPAKMLNNLATCN CCCCCCEEEEEEECHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHCCCHHHHHHHHHCCC SGESEKNIYAEHINFNKETQIVTMDHIFLSESYEIFMPLMACVRGIEKFITPGENNFALI CCCCCCCEEEECCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE YYYWWGSEIAIALEFDANGSRITANPKAENLTIADAFFDEHGEALAEELYNKQGFI EEEEECCEEEEEEEECCCCCEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SEPASFFLHAHITESNLKKFFHSPATNIKDYDDWLPWFTEEQRLYGDPAKMLNNLATCN CCCCCEEEEEEECHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHCCCHHHHHHHHHCCC SGESEKNIYAEHINFNKETQIVTMDHIFLSESYEIFMPLMACVRGIEKFITPGENNFALI CCCCCCCEEEECCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE YYYWWGSEIAIALEFDANGSRITANPKAENLTIADAFFDEHGEALAEELYNKQGFI EEEEECCEEEEEEEECCCCCEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA