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The map label for this gene is yqjC [H]

Identifier: 16766527

GI number: 16766527

Start: 3396388

End: 3396756

Strand: Direct

Name: yqjC [H]

Synonym: STM3228

Alternate gene names: 16766527

Gene position: 3396388-3396756 (Clockwise)

Preceding gene: 16766526

Following gene: 16766528

Centisome position: 69.92

GC content: 47.7

Gene sequence:

>369_bases
ATGAAATACCGCATCGCTTTGGCTATCACGCTTTTTACACTTAGCGCCGGTAGCTACGCTAATTCGCTTTGTCAGGAAAA
AGAGCAGGATATACAAAAGGAAATTAGCTACGCTGAAAAGCACAACAATCAGCGCCGTATTGAGGGTCTGAACAAGGCGC
TCAGCGAAGTACGCGCCAATTGTACTGACAGCAAGCTGCGCGCCGAGCATCAGAAAAAGATCGCTGAGCAAAAAGAAGAG
GTAGCCGAACGCCAACGTGATTTAGCCGAGGCAAAAGCAAAAGGCGATGCGGATAAAATAGACAAACGTGAACGTAAGCT
GGCCGAGGCTCAGGATGAGCTAAAAAAACTTGAGGCCAGAGACTACTAA

Upstream 100 bases:

>100_bases
GTTTAATGACTATGATTAATAAAGCGGTGTTTAACCCACCGCGTTATTATCGGGATCACCGCCCCGGACAACGGGTCCGA
ACATAAGGGAAAGTTCAGGA

Downstream 100 bases:

>100_bases
ATTAACGCCGAATGTAAATACTCACTCACCTGGAGAAAACTATGTCGAAAGATAACACTACGGAACATCTGCGCGCTGAG
TTGAAATCCCTGACCGATAC

Product: periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKYRIALAITLFTLSAGSYANSLCQEKEQDIQKEISYAEKHNNQRRIEGLNKALSEVRANCTDSKLRAEHQKKIAEQKEE
VAERQRDLAEAKAKGDADKIDKRERKLAEAQDELKKLEARDY

Sequences:

>Translated_122_residues
MKYRIALAITLFTLSAGSYANSLCQEKEQDIQKEISYAEKHNNQRRIEGLNKALSEVRANCTDSKLRAEHQKKIAEQKEE
VAERQRDLAEAKAKGDADKIDKRERKLAEAQDELKKLEARDY
>Mature_122_residues
MKYRIALAITLFTLSAGSYANSLCQEKEQDIQKEISYAEKHNNQRRIEGLNKALSEVRANCTDSKLRAEHQKKIAEQKEE
VAERQRDLAEAKAKGDADKIDKRERKLAEAQDELKKLEARDY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082209, Length=122, Percent_Identity=84.4262295081967, Blast_Score=205, Evalue=7e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009468 [H]

Pfam domain/function: PF06476 DUF1090 [H]

EC number: NA

Molecular weight: Translated: 14065; Mature: 14065

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYRIALAITLFTLSAGSYANSLCQEKEQDIQKEISYAEKHNNQRRIEGLNKALSEVRAN
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
CTDSKLRAEHQKKIAEQKEEVAERQRDLAEAKAKGDADKIDKRERKLAEAQDELKKLEAR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
DY
CC
>Mature Secondary Structure
MKYRIALAITLFTLSAGSYANSLCQEKEQDIQKEISYAEKHNNQRRIEGLNKALSEVRAN
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
CTDSKLRAEHQKKIAEQKEEVAERQRDLAEAKAKGDADKIDKRERKLAEAQDELKKLEAR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
DY
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]