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The map label for this gene is ygjQ [H]

Identifier: 16766521

GI number: 16766521

Start: 3390225

End: 3390917

Strand: Direct

Name: ygjQ [H]

Synonym: STM3222

Alternate gene names: 16766521

Gene position: 3390225-3390917 (Clockwise)

Preceding gene: 16766520

Following gene: 16766522

Centisome position: 69.79

GC content: 54.69

Gene sequence:

>693_bases
ATGCTCTCACAATGTGCCCGTTTTATCCGCCGCCTCTGTTTTACACGCCGGGCCTTAACAGTGGCGTGTTTTCTGCTTGT
CGCAGCAGGCGTCGCGCTTTTCTATTCCAACTGGCTTATCGTCAACGCCTCACAGCATCTGACATGGAATGACATTCAGA
CCGTTCCCGCCCGCAACGTCGGGCTGGTGTTAGGCGCCAAACCCGGCAATCGGTATTTTACCCGGCGGATTAATACTGCC
GCCGCGTTGTATCACGCCGGTAAAGTGAAGTGGCTGTTAGTCAGCGGCGATAATGGCAAAAAAGAGTACGATGAACCTTC
GGCGATGCAGCAGGCGCTGATGGCGAAAGGTGTGCCGGAGGCGGCCATTTTTTGTGATTATGCCGGATTCTCCACGCTGG
ACTCCGTGGTTCGCGCCCGGAAAGTGTTTGGCGAAAGCCGCATTACGATTATCTCGCAAGCATTTCATAATCAACGGGCG
ATCTGGCTGGCGCAACAATATGGCATTGACGCTATCGGCGTTAACGCGCCGGATCTGAATAAAAGGCACGGAACCTACAC
ACGACTTCGGGAAAAGCTGGCGCGGGTTAGCGCAGTGCTGGATGCCAAAATTTTGCATCGTCAGCCTAAATATCTGGGCG
CTGGCGTCACTATTGGGGCTGATAGCGCACACGGGTGCCCTTCTCGCCAGTAA

Upstream 100 bases:

>100_bases
TCGGCGCGTTCACATTTCGCTCATTGCCTGCCGCCACGTCAAGGATGACGATCTGTAGAGGGTATTTTTTATCCACCGCC
AACGGAACCGCGCAACGACC

Downstream 100 bases:

>100_bases
AATGCCAGAGTGCGTCGCAGCGCACTGGCAAGGGCGGAAAGGCGTGCTACATTGACGAAAAATCCCTTTCTGGAGTCCGC
TGACGTTTATGATACGTTTC

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MLSQCARFIRRLCFTRRALTVACFLLVAAGVALFYSNWLIVNASQHLTWNDIQTVPARNVGLVLGAKPGNRYFTRRINTA
AALYHAGKVKWLLVSGDNGKKEYDEPSAMQQALMAKGVPEAAIFCDYAGFSTLDSVVRARKVFGESRITIISQAFHNQRA
IWLAQQYGIDAIGVNAPDLNKRHGTYTRLREKLARVSAVLDAKILHRQPKYLGAGVTIGADSAHGCPSRQ

Sequences:

>Translated_230_residues
MLSQCARFIRRLCFTRRALTVACFLLVAAGVALFYSNWLIVNASQHLTWNDIQTVPARNVGLVLGAKPGNRYFTRRINTA
AALYHAGKVKWLLVSGDNGKKEYDEPSAMQQALMAKGVPEAAIFCDYAGFSTLDSVVRARKVFGESRITIISQAFHNQRA
IWLAQQYGIDAIGVNAPDLNKRHGTYTRLREKLARVSAVLDAKILHRQPKYLGAGVTIGADSAHGCPSRQ
>Mature_230_residues
MLSQCARFIRRLCFTRRALTVACFLLVAAGVALFYSNWLIVNASQHLTWNDIQTVPARNVGLVLGAKPGNRYFTRRINTA
AALYHAGKVKWLLVSGDNGKKEYDEPSAMQQALMAKGVPEAAIFCDYAGFSTLDSVVRARKVFGESRITIISQAFHNQRA
IWLAQQYGIDAIGVNAPDLNKRHGTYTRLREKLARVSAVLDAKILHRQPKYLGAGVTIGADSAHGCPSRQ

Specific function: Unknown

COG id: COG2949

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli sanA [H]

Homologues:

Organism=Escherichia coli, GI1789468, Length=230, Percent_Identity=73.4782608695652, Blast_Score=363, Evalue=1e-102,
Organism=Escherichia coli, GI1788466, Length=191, Percent_Identity=40.8376963350785, Blast_Score=136, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 25391; Mature: 25391

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSQCARFIRRLCFTRRALTVACFLLVAAGVALFYSNWLIVNASQHLTWNDIQTVPARNV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCC
GLVLGAKPGNRYFTRRINTAAALYHAGKVKWLLVSGDNGKKEYDEPSAMQQALMAKGVPE
EEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCC
AAIFCDYAGFSTLDSVVRARKVFGESRITIISQAFHNQRAIWLAQQYGIDAIGVNAPDLN
HHEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEHHHCCCCEECCCCCCCC
KRHGTYTRLREKLARVSAVLDAKILHRQPKYLGAGVTIGADSAHGCPSRQ
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEECCCCCCCCCCCC
>Mature Secondary Structure
MLSQCARFIRRLCFTRRALTVACFLLVAAGVALFYSNWLIVNASQHLTWNDIQTVPARNV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCC
GLVLGAKPGNRYFTRRINTAAALYHAGKVKWLLVSGDNGKKEYDEPSAMQQALMAKGVPE
EEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCC
AAIFCDYAGFSTLDSVVRARKVFGESRITIISQAFHNQRAIWLAQQYGIDAIGVNAPDLN
HHEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEHHHCCCCEECCCCCCCC
KRHGTYTRLREKLARVSAVLDAKILHRQPKYLGAGVTIGADSAHGCPSRQ
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]