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The map label for this gene is yqjI [H]

Identifier: 16766514

GI number: 16766514

Start: 3380158

End: 3380805

Strand: Direct

Name: yqjI [H]

Synonym: STM3215

Alternate gene names: 16766514

Gene position: 3380158-3380805 (Clockwise)

Preceding gene: 39546362

Following gene: 161353584

Centisome position: 69.59

GC content: 53.55

Gene sequence:

>648_bases
ATGATGCAAAATCAACATGAAGGGTGTTGCAAAAACCGGGATCATATGCACGATGGTTGCTGCAAAGATCGAGAACATCA
GCATGAAGGCTGCCATAGCGCGCATCAGCATGAGAACGCCAGTTGCGGCGGCGAGCACCGTCACGGACACGGCTGTGGTC
GTCATGGACAGGGCGGTGGTCGACGTCAGCGATTTTTTGGCCACGGGGAACTTCGGCTGGTCATTCTTGATATCCTGACC
CGGGACGCCAGCCACGGCTATGAACTGATTAAAGCGATAGAAAACCTGACGGGGGGCGGCTATACGCCAAGCGCTGGTGT
GATCTACCCTACGCTGGATTTTTTACAGGATCAGCAATTTATCACGATTAGCGACGAAGAAGGCGGGCGGAAAAAAATCG
CGATTACCGCGAACGGCGCGCAATGGCTTGATGAAAATCGCGAACACCTGACGCATATTCAGGCGCGGCTAAAAGCCCGT
TGTGTGGGCATGGAGTTACGTAAAAATCCGCAGATGAAGCGGGCGCTGGATAACTTCAAGGCCGTGCTGGATCTGCGGAT
AAACCACAGCGATATCAACGACGCGCAAATCAAACGCATTATCGGCGTGATTGATCGCGCGGCGCTGGAAATCGCCGAAC
TGGATTAA

Upstream 100 bases:

>100_bases
AAACGTTATAAATTAATAGATTATATCAACAATCGCTTTTATCCTTGCTAAAAACCATCATTTAGATATAAATTAGATAT
ATCTAAATAAGCAGGAGGCA

Downstream 100 bases:

>100_bases
GCGGGCTGCGTGTCCTCTTCGCGGACGCGGAACACGTTAACCAGCTCTTTTAAATGTAACGCCTGTTCGTTCAGCGACGC
CGCGGCGGCAACAGACTCTT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MMQNQHEGCCKNRDHMHDGCCKDREHQHEGCHSAHQHENASCGGEHRHGHGCGRHGQGGGRRQRFFGHGELRLVILDILT
RDASHGYELIKAIENLTGGGYTPSAGVIYPTLDFLQDQQFITISDEEGGRKKIAITANGAQWLDENREHLTHIQARLKAR
CVGMELRKNPQMKRALDNFKAVLDLRINHSDINDAQIKRIIGVIDRAALEIAELD

Sequences:

>Translated_215_residues
MMQNQHEGCCKNRDHMHDGCCKDREHQHEGCHSAHQHENASCGGEHRHGHGCGRHGQGGGRRQRFFGHGELRLVILDILT
RDASHGYELIKAIENLTGGGYTPSAGVIYPTLDFLQDQQFITISDEEGGRKKIAITANGAQWLDENREHLTHIQARLKAR
CVGMELRKNPQMKRALDNFKAVLDLRINHSDINDAQIKRIIGVIDRAALEIAELD
>Mature_215_residues
MMQNQHEGCCKNRDHMHDGCCKDREHQHEGCHSAHQHENASCGGEHRHGHGCGRHGQGGGRRQRFFGHGELRLVILDILT
RDASHGYELIKAIENLTGGGYTPSAGVIYPTLDFLQDQQFITISDEEGGRKKIAITANGAQWLDENREHLTHIQARLKAR
CVGMELRKNPQMKRALDNFKAVLDLRINHSDINDAQIKRIIGVIDRAALEIAELD

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789452, Length=216, Percent_Identity=68.9814814814815, Blast_Score=259, Evalue=1e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 24177; Mature: 24177

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQNQHEGCCKNRDHMHDGCCKDREHQHEGCHSAHQHENASCGGEHRHGHGCGRHGQGGG
CCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
RRQRFFGHGELRLVILDILTRDASHGYELIKAIENLTGGGYTPSAGVIYPTLDFLQDQQF
CCCCEECCCCEEEHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEECCHHHHCCCCE
ITISDEEGGRKKIAITANGAQWLDENREHLTHIQARLKARCVGMELRKNPQMKRALDNFK
EEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHH
AVLDLRINHSDINDAQIKRIIGVIDRAALEIAELD
HHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMQNQHEGCCKNRDHMHDGCCKDREHQHEGCHSAHQHENASCGGEHRHGHGCGRHGQGGG
CCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
RRQRFFGHGELRLVILDILTRDASHGYELIKAIENLTGGGYTPSAGVIYPTLDFLQDQQF
CCCCEECCCCEEEHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEECCHHHHCCCCE
ITISDEEGGRKKIAITANGAQWLDENREHLTHIQARLKARCVGMELRKNPQMKRALDNFK
EEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHH
AVLDLRINHSDINDAQIKRIIGVIDRAALEIAELD
HHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]