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The map label for this gene is 16766470

Identifier: 16766470

GI number: 16766470

Start: 3332622

End: 3333104

Strand: Direct

Name: 16766470

Synonym: STM3170

Alternate gene names: NA

Gene position: 3332622-3333104 (Clockwise)

Preceding gene: 16766469

Following gene: 16766471

Centisome position: 68.61

GC content: 47.41

Gene sequence:

>483_bases
ATGCGAATACTCACCAATGCACTGAACAAAATACTGGCCGGGTGCTGCTGTATTATTCTGGCGGTCATGGTTGCCTGCGT
ATCCTGGCAGGTGGCGGCGCGCTTTATATTCAACGCGCCAAGCAGCACGCTCGACGAATTCACCCAGATTCTTTTTATGT
GGATGATTCTGTTAGGCGGCGTCTATACCGCCGGATTAAAAAAACATTTAGCTATCGATTTGTTAGCGCAAAAACTCTCC
CGAACGCCCGCCCTCATGCTCGACAGTATCATTCAGGTGATTATTACCGTGTTCGCGCTGATTTTTATGGTGTACGGCGG
TGATATTATTGTTGAAAAAGCGGCGCACGTCAGCCAAATGTCCCCGGTATTAAAATGGCCTATGGATAAAGTCTATTGGG
TCATGCCGATTAGCGGCGTCATCCTGGTGTACTACACCATTGTGAACGTTATTGATAATTATCATCAGCGCCATCTTCGC
TAA

Upstream 100 bases:

>100_bases
AGTTCCGCGCAAAAGACGCTCAGTCAGCGAAGGATCTGGAATACATCGAGAATATGTAAATCTGCCGGGCAGGGTTCTCC
TGCCCTTTACAGGATGTAAT

Downstream 100 bases:

>100_bases
CGAGGGATATATGGACTTTGAATATATTTACCCAATAATTGTTTTATTTGGCAGCTTTGCCATTATACTGGCGGTCGGCG
TTCCTATTACATTCGCTATC

Product: inner membrane protein

Products: NA

Alternate protein names: Tripartite ATP-Independent Periplasmic Transporter DctQ; TRAP Transporter DctQ-Like Membrane Protein; C4-Dicarboxylate Transport System; Aspartate Kinase Monofunctional Class; TRAP Transporter Small Transmembrane Protein; 30S Ribosomal; TRAP-Type C4-Dicarboxylate Transport System; Membrane Transporter; TRAP Transporter DctQ Family Protein; C4-Dicarboxylate Transport System Permease; TRAP Dicarboxylate Transporter DctQ Subunit; C4-Dicarboxylate Permease Small Protein; C4-Dicarboxylate Transporter Small Permease Component; ATP-Independent Transporter Subunit; Tripartite ATP-Independent Periplasmic Transporter; Inner Membrane Protein

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MRILTNALNKILAGCCCIILAVMVACVSWQVAARFIFNAPSSTLDEFTQILFMWMILLGGVYTAGLKKHLAIDLLAQKLS
RTPALMLDSIIQVIITVFALIFMVYGGDIIVEKAAHVSQMSPVLKWPMDKVYWVMPISGVILVYYTIVNVIDNYHQRHLR

Sequences:

>Translated_160_residues
MRILTNALNKILAGCCCIILAVMVACVSWQVAARFIFNAPSSTLDEFTQILFMWMILLGGVYTAGLKKHLAIDLLAQKLS
RTPALMLDSIIQVIITVFALIFMVYGGDIIVEKAAHVSQMSPVLKWPMDKVYWVMPISGVILVYYTIVNVIDNYHQRHLR
>Mature_160_residues
MRILTNALNKILAGCCCIILAVMVACVSWQVAARFIFNAPSSTLDEFTQILFMWMILLGGVYTAGLKKHLAIDLLAQKLS
RTPALMLDSIIQVIITVFALIFMVYGGDIIVEKAAHVSQMSPVLKWPMDKVYWVMPISGVILVYYTIVNVIDNYHQRHLR

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18003; Mature: 18003

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILTNALNKILAGCCCIILAVMVACVSWQVAARFIFNAPSSTLDEFTQILFMWMILLGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
VYTAGLKKHLAIDLLAQKLSRTPALMLDSIIQVIITVFALIFMVYGGDIIVEKAAHVSQM
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
SPVLKWPMDKVYWVMPISGVILVYYTIVNVIDNYHQRHLR
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRILTNALNKILAGCCCIILAVMVACVSWQVAARFIFNAPSSTLDEFTQILFMWMILLGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
VYTAGLKKHLAIDLLAQKLSRTPALMLDSIIQVIITVFALIFMVYGGDIIVEKAAHVSQM
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
SPVLKWPMDKVYWVMPISGVILVYYTIVNVIDNYHQRHLR
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA