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The map label for this gene is yiiZ [H]

Identifier: 16766469

GI number: 16766469

Start: 3331597

End: 3332580

Strand: Direct

Name: yiiZ [H]

Synonym: STM3169

Alternate gene names: 16766469

Gene position: 3331597-3332580 (Clockwise)

Preceding gene: 16766467

Following gene: 16766470

Centisome position: 68.59

GC content: 51.73

Gene sequence:

>984_bases
ATGAAAAACACACGTTCATTCACAACATCAGCGGTATTACTGGCCGGCTGTTTGCTACTGGCATTTCCAGCGCTCGCCAA
AACCACGCTGAAACTGAGCCACAATCAGGATAAAAGCCACGCCGTTCACAAAGCGATGAGCTATCTGGCCGACAAAGCGA
AAGCCTATTCGGACGGCGAATTAAATATTCGTATTTACCCCAACGCCACGCTGGGCAACGAACGTGAATCGCTGGAATTG
ATGAACTCCGGCGCTCTGCAAATGGTGAAAGTCAATGCGGCATCGCTGGAGTCTTTTGCGCCGGAATATAGCGTGTTTAG
CCTGCCGTTTTTATTCCGCGACCGCGATCACTACTACAACGTACTGAAAAGCGACTTAGGGAAACGCATTCTCGCGTCCT
CCGAAAGCAAAGGCTTCGTCGGCTTAACCTGGTACGACGGCGGCGCCCGCAGTTTTTACGCTGGTAAGCCCATCACTCAA
CCCGACGATTTAGCCGGTATGAAAATCAGAGTGCAGCAAAGCCCCAGCGCTATCGCGATGGTGAAAGCTCTCGGCGGCGT
GCCGACGCCGATGGCGCAAGGCGAACTCTATACCGCGCTCCAGCAAGGCGTGGTCGATGGCGGCGAAAACAACCCCGTGG
TTTATGCCGATATGCGTCATGCGGAGGTGGCGAAATTCTATTCCCGCGACGAGCACACGATGGTGCCGGATGTCCTGGTC
ATCAGTACCAAAGTACTTAACAAATTGAGCGATAAAGAGCGGAAGGCGTTATATAAAGCCGCAGATGAATCCATGCAGCA
AATGAAAGATGTCATCTGGCCCGCCGCGGAAAAAGAGGCTTATGAGAGCATGAAGGCCATGAACGCGACTGTTGTTGATA
TTGATAAATCCGCGTTCAAACAGCGTGTTAAGCCCTTGTTTGATGAGTTCCGCGCAAAAGACGCTCAGTCAGCGAAGGAT
CTGGAATACATCGAGAATATGTAA

Upstream 100 bases:

>100_bases
ACCATCACCACGCCTTTCCCCAACGCAACACCTTACGTATCAGCAGGTTATTAATTAATCAACGATAACCACAGGAATCC
CAACCTATAAGGAAGCAGAT

Downstream 100 bases:

>100_bases
ATCTGCCGGGCAGGGTTCTCCTGCCCTTTACAGGATGTAATATGCGAATACTCACCAATGCACTGAACAAAATACTGGCC
GGGTGCTGCTGTATTATTCT

Product: periplasmic dicarboxylate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MKNTRSFTTSAVLLAGCLLLAFPALAKTTLKLSHNQDKSHAVHKAMSYLADKAKAYSDGELNIRIYPNATLGNERESLEL
MNSGALQMVKVNAASLESFAPEYSVFSLPFLFRDRDHYYNVLKSDLGKRILASSESKGFVGLTWYDGGARSFYAGKPITQ
PDDLAGMKIRVQQSPSAIAMVKALGGVPTPMAQGELYTALQQGVVDGGENNPVVYADMRHAEVAKFYSRDEHTMVPDVLV
ISTKVLNKLSDKERKALYKAADESMQQMKDVIWPAAEKEAYESMKAMNATVVDIDKSAFKQRVKPLFDEFRAKDAQSAKD
LEYIENM

Sequences:

>Translated_327_residues
MKNTRSFTTSAVLLAGCLLLAFPALAKTTLKLSHNQDKSHAVHKAMSYLADKAKAYSDGELNIRIYPNATLGNERESLEL
MNSGALQMVKVNAASLESFAPEYSVFSLPFLFRDRDHYYNVLKSDLGKRILASSESKGFVGLTWYDGGARSFYAGKPITQ
PDDLAGMKIRVQQSPSAIAMVKALGGVPTPMAQGELYTALQQGVVDGGENNPVVYADMRHAEVAKFYSRDEHTMVPDVLV
ISTKVLNKLSDKERKALYKAADESMQQMKDVIWPAAEKEAYESMKAMNATVVDIDKSAFKQRVKPLFDEFRAKDAQSAKD
LEYIENM
>Mature_327_residues
MKNTRSFTTSAVLLAGCLLLAFPALAKTTLKLSHNQDKSHAVHKAMSYLADKAKAYSDGELNIRIYPNATLGNERESLEL
MNSGALQMVKVNAASLESFAPEYSVFSLPFLFRDRDHYYNVLKSDLGKRILASSESKGFVGLTWYDGGARSFYAGKPITQ
PDDLAGMKIRVQQSPSAIAMVKALGGVPTPMAQGELYTALQQGVVDGGENNPVVYADMRHAEVAKFYSRDEHTMVPDVLV
ISTKVLNKLSDKERKALYKAADESMQQMKDVIWPAAEKEAYESMKAMNATVVDIDKSAFKQRVKPLFDEFRAKDAQSAKD
LEYIENM

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790004, Length=316, Percent_Identity=27.8481012658228, Blast_Score=141, Evalue=6e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 36217; Mature: 36217

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTRSFTTSAVLLAGCLLLAFPALAKTTLKLSHNQDKSHAVHKAMSYLADKAKAYSDGE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCE
LNIRIYPNATLGNERESLELMNSGALQMVKVNAASLESFAPEYSVFSLPFLFRDRDHYYN
EEEEEECCCCCCCCHHHHHHHHCCCEEEEEECHHHHHHHCCCCCEEECCHHCCCCHHHHH
VLKSDLGKRILASSESKGFVGLTWYDGGARSFYAGKPITQPDDLAGMKIRVQQSPSAIAM
HHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCCEEEEECCCHHHHH
VKALGGVPTPMAQGELYTALQQGVVDGGENNPVVYADMRHAEVAKFYSRDEHTMVPDVLV
HHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCHHHH
ISTKVLNKLSDKERKALYKAADESMQQMKDVIWPAAEKEAYESMKAMNATVVDIDKSAFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCHHHHH
QRVKPLFDEFRAKDAQSAKDLEYIENM
HHHHHHHHHHHCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MKNTRSFTTSAVLLAGCLLLAFPALAKTTLKLSHNQDKSHAVHKAMSYLADKAKAYSDGE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCE
LNIRIYPNATLGNERESLELMNSGALQMVKVNAASLESFAPEYSVFSLPFLFRDRDHYYN
EEEEEECCCCCCCCHHHHHHHHCCCEEEEEECHHHHHHHCCCCCEEECCHHCCCCHHHHH
VLKSDLGKRILASSESKGFVGLTWYDGGARSFYAGKPITQPDDLAGMKIRVQQSPSAIAM
HHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCCEEEEECCCHHHHH
VKALGGVPTPMAQGELYTALQQGVVDGGENNPVVYADMRHAEVAKFYSRDEHTMVPDVLV
HHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCHHHH
ISTKVLNKLSDKERKALYKAADESMQQMKDVIWPAAEKEAYESMKAMNATVVDIDKSAFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCHHHHH
QRVKPLFDEFRAKDAQSAKDLEYIENM
HHHHHHHHHHHCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609; 7729880 [H]