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The map label for this gene is yqhD [H]

Identifier: 16766464

GI number: 16766464

Start: 3324137

End: 3325300

Strand: Direct

Name: yqhD [H]

Synonym: STM3164

Alternate gene names: 16766464

Gene position: 3324137-3325300 (Clockwise)

Preceding gene: 16766462

Following gene: 16766465

Centisome position: 68.43

GC content: 55.24

Gene sequence:

>1164_bases
ATGAACAATTTCAAATTACATACCCCTACCCGCATTCTGTTTGGTAAAGGCGCTATCGTCGATCTTCGCGATCAAATCCC
GCAGGACGCCCGCGTGCTGATTACCTATGGCGGCGGTAGCGTGAAAAAGACCGGCGTACTGGCGCAAGTTCAGGAAGCGT
TAAAAGGACTGGATGTTCGGGAGTTTGGCGGTATTGAACCGAACCCGTCCTATGAAACGCTGATGAAGGCCGTGCAGCTT
GTGCGCGACGAAAATATTACCTTCCTGCTGGCCGTTGGCGGCGGTTCCGTACTGGACGGCACCAAATTTATCGCCGCAGC
GGCGCAGTATACGGACGGCGTCGATCCGTGGCACATTCTGGAAACCGGCGGTACTGAGATTCGTAGCGCAATCCCGATGG
GGTCTGTGCTGACCCTACCGGCAACCGGCTCAGAATCGAACGCCGGCGCAGTCATTTCCCGTAAAACCACTGGCGACAAA
CAGGCCTTCCACTCCTCGTTCGTGCAACCGGTGTTTGCCGTACTGGACCCGGTCTACACCTATACATTGCCGCCGCGCCA
GGTTGCGAACGGCGTCGTGGATGCTTTCGTCCATACCGTTGAGCAGTACGTCACTTACCCGGTTAACGGCAAAATTCAGG
ATCGTTTCGCCGAAGGTATTTTACTCACACTGATCGAAGAAGGTCCCAAAGCGCTGCAAGAGCCTGAAAACTATGACGTC
CGCGCTAACGTGATGTGGGCCGCTACTCAGGCGTTAAATGGCCTGATTGGCGCTGGGGTTCCGCAGGACTGGGCGACGCA
TATGCTGGGCCACGAGCTTACCGCGATGCACGGTCTCGATCATGCCCAGACGCTGGCTATCGTTCTGCCTGCGCTATGGA
ACGAAAAACGAGACGTTAAACGTGCAAAACTCCTGCAATATGCTGAACGTGTATGGAATATCACCGACGGTTCCGACGAC
GAGCGTATTGATGCCGCCATTGCCGCCACCCGCCGTTTCTTCGAACAGATGGGCGTGCCTACCCACCTGTCCGATTACGG
TCTGGATGGCAGCACTATTCCGGCGCTACTGGCTAAACTTGAGGCGCATGGATGCATAAATTTAGGTGAAAATCAGGATA
TTACGCTGGATGTCAGCCGTCGGATTTATGAAGCGGCGCGCTAA

Upstream 100 bases:

>100_bases
GCAGAAATGTGCATTGAGAGACATCCCTCACAAGACCACAATGATGACCATCAGGCAGACAGCCGCCTGCCCTCTTTTTA
CCCACATAAGGGAATGAGCA

Downstream 100 bases:

>100_bases
GGTTTTTTCGCCTCTGACTTTCGTTTTTGGCCATTTCGTCCAGACTTAAGTCACTTAGTCTCGCCGGACCCGACTCCGGC
GAGCCAATTAAAAGAGGAAC

Product: alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MNNFKLHTPTRILFGKGAIVDLRDQIPQDARVLITYGGGSVKKTGVLAQVQEALKGLDVREFGGIEPNPSYETLMKAVQL
VRDENITFLLAVGGGSVLDGTKFIAAAAQYTDGVDPWHILETGGTEIRSAIPMGSVLTLPATGSESNAGAVISRKTTGDK
QAFHSSFVQPVFAVLDPVYTYTLPPRQVANGVVDAFVHTVEQYVTYPVNGKIQDRFAEGILLTLIEEGPKALQEPENYDV
RANVMWAATQALNGLIGAGVPQDWATHMLGHELTAMHGLDHAQTLAIVLPALWNEKRDVKRAKLLQYAERVWNITDGSDD
ERIDAAIAATRRFFEQMGVPTHLSDYGLDGSTIPALLAKLEAHGCINLGENQDITLDVSRRIYEAAR

Sequences:

>Translated_387_residues
MNNFKLHTPTRILFGKGAIVDLRDQIPQDARVLITYGGGSVKKTGVLAQVQEALKGLDVREFGGIEPNPSYETLMKAVQL
VRDENITFLLAVGGGSVLDGTKFIAAAAQYTDGVDPWHILETGGTEIRSAIPMGSVLTLPATGSESNAGAVISRKTTGDK
QAFHSSFVQPVFAVLDPVYTYTLPPRQVANGVVDAFVHTVEQYVTYPVNGKIQDRFAEGILLTLIEEGPKALQEPENYDV
RANVMWAATQALNGLIGAGVPQDWATHMLGHELTAMHGLDHAQTLAIVLPALWNEKRDVKRAKLLQYAERVWNITDGSDD
ERIDAAIAATRRFFEQMGVPTHLSDYGLDGSTIPALLAKLEAHGCINLGENQDITLDVSRRIYEAAR
>Mature_387_residues
MNNFKLHTPTRILFGKGAIVDLRDQIPQDARVLITYGGGSVKKTGVLAQVQEALKGLDVREFGGIEPNPSYETLMKAVQL
VRDENITFLLAVGGGSVLDGTKFIAAAAQYTDGVDPWHILETGGTEIRSAIPMGSVLTLPATGSESNAGAVISRKTTGDK
QAFHSSFVQPVFAVLDPVYTYTLPPRQVANGVVDAFVHTVEQYVTYPVNGKIQDRFAEGILLTLIEEGPKALQEPENYDV
RANVMWAATQALNGLIGAGVPQDWATHMLGHELTAMHGLDHAQTLAIVLPALWNEKRDVKRAKLLQYAERVWNITDGSDD
ERIDAAIAATRRFFEQMGVPTHLSDYGLDGSTIPALLAKLEAHGCINLGENQDITLDVSRRIYEAAR

Specific function: NADP-dependent ADH activity [H]

COG id: COG1979

COG function: function code C; Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI1789386, Length=387, Percent_Identity=88.6304909560724, Blast_Score=710, Evalue=0.0,
Organism=Escherichia coli, GI48994951, Length=311, Percent_Identity=25.08038585209, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1789163, Length=382, Percent_Identity=24.869109947644, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI87082107, Length=280, Percent_Identity=25.7142857142857, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787493, Length=382, Percent_Identity=25.3926701570681, Blast_Score=65, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17537053, Length=274, Percent_Identity=22.6277372262774, Blast_Score=66, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6321181, Length=359, Percent_Identity=25.3481894150418, Blast_Score=94, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24657991, Length=346, Percent_Identity=24.2774566473988, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001670
- InterPro:   IPR018211 [H]

Pfam domain/function: PF00465 Fe-ADH [H]

EC number: 1.1.-.- [C]

Molecular weight: Translated: 42084; Mature: 42084

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: PS00913 ADH_IRON_1 ; PS00060 ADH_IRON_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNFKLHTPTRILFGKGAIVDLRDQIPQDARVLITYGGGSVKKTGVLAQVQEALKGLDVR
CCCCCCCCCCEEEECCCCEEEHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHH
EFGGIEPNPSYETLMKAVQLVRDENITFLLAVGGGSVLDGTKFIAAAAQYTDGVDPWHIL
HCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEE
ETGGTEIRSAIPMGSVLTLPATGSESNAGAVISRKTTGDKQAFHSSFVQPVFAVLDPVYT
ECCCHHHHHHCCCCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCHHHE
YTLPPRQVANGVVDAFVHTVEQYVTYPVNGKIQDRFAEGILLTLIEEGPKALQEPENYDV
ECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHEEHHHHCHHHHCCCCCCCE
RANVMWAATQALNGLIGAGVPQDWATHMLGHELTAMHGLDHAQTLAIVLPALWNEKRDVK
EEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHH
RAKLLQYAERVWNITDGSDDERIDAAIAATRRFFEQMGVPTHLSDYGLDGSTIPALLAKL
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHH
EAHGCINLGENQDITLDVSRRIYEAAR
HHCCCEECCCCCCEEEEHHHHHHHHCC
>Mature Secondary Structure
MNNFKLHTPTRILFGKGAIVDLRDQIPQDARVLITYGGGSVKKTGVLAQVQEALKGLDVR
CCCCCCCCCCEEEECCCCEEEHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHH
EFGGIEPNPSYETLMKAVQLVRDENITFLLAVGGGSVLDGTKFIAAAAQYTDGVDPWHIL
HCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEE
ETGGTEIRSAIPMGSVLTLPATGSESNAGAVISRKTTGDKQAFHSSFVQPVFAVLDPVYT
ECCCHHHHHHCCCCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCHHHE
YTLPPRQVANGVVDAFVHTVEQYVTYPVNGKIQDRFAEGILLTLIEEGPKALQEPENYDV
ECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHEEHHHHCHHHHCCCCCCCE
RANVMWAATQALNGLIGAGVPQDWATHMLGHELTAMHGLDHAQTLAIVLPALWNEKRDVK
EEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHH
RAKLLQYAERVWNITDGSDDERIDAAIAATRRFFEQMGVPTHLSDYGLDGSTIPALLAKL
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHH
EAHGCINLGENQDITLDVSRRIYEAAR
HHCCCEECCCCCCEEEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]