| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16766427
Identifier: 16766427
GI number: 16766427
Start: 3287120
End: 3287494
Strand: Reverse
Name: 16766427
Synonym: STM3127
Alternate gene names: NA
Gene position: 3287494-3287120 (Counterclockwise)
Preceding gene: 16766428
Following gene: 16766426
Centisome position: 67.68
GC content: 49.07
Gene sequence:
>375_bases ATGCAAGCTTTTAAACTCAATCAACCTGTTCCTGAATTACAGCCAATCGGGAGTGTCAGCCTGTTGGGGGCGTTGCCAAC AGAAGGCGATCCCCAGGTCGCCGTTGCGATGATTTACGGTAAACCTGAGGACGTATTTACCTGTGGACTGTTTTCATCGA CCCGCGGCGGTTTCACTATGATTTATCCCTTTACCGAGCACGCAACCGTGCTGGAAGGGGAAGTGGAACTCACTGTTGCG GGTCAGGAACCGATACGTTTTTCACCAGGCGATAGTTGGTTTGTTGAACAGGGAACCGAAGTGGCATGGAAAGTTTTAAC GCCCCGTTTTGTAAAACATTATCTGGCAAAAGTTGAAAGCCATAAGCAGGGTTGA
Upstream 100 bases:
>100_bases ATGGTCGCGACAGTCTACGTCTATTGCTGGTCAGTGCGGGAAAACTGATACATCAAACAGCCGGTTTCTGGAAAGGCCGG AATTAACCAGGAGAACATTA
Downstream 100 bases:
>100_bases ATCCTTTAATTGTTCGTCAGTAGCGTTGGCATCACTGGGGAGAATAACGCGCTCCCCACTTGCTATTAGCGCATGCGGGG ACGGCGTCACAACGTTATTT
Product: cytoplasmic protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MQAFKLNQPVPELQPIGSVSLLGALPTEGDPQVAVAMIYGKPEDVFTCGLFSSTRGGFTMIYPFTEHATVLEGEVELTVA GQEPIRFSPGDSWFVEQGTEVAWKVLTPRFVKHYLAKVESHKQG
Sequences:
>Translated_124_residues MQAFKLNQPVPELQPIGSVSLLGALPTEGDPQVAVAMIYGKPEDVFTCGLFSSTRGGFTMIYPFTEHATVLEGEVELTVA GQEPIRFSPGDSWFVEQGTEVAWKVLTPRFVKHYLAKVESHKQG >Mature_124_residues MQAFKLNQPVPELQPIGSVSLLGALPTEGDPQVAVAMIYGKPEDVFTCGLFSSTRGGFTMIYPFTEHATVLEGEVELTVA GQEPIRFSPGDSWFVEQGTEVAWKVLTPRFVKHYLAKVESHKQG
Specific function: Unknown
COG id: COG3450
COG function: function code R; Predicted enzyme of the cupin superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13597; Mature: 13597
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAFKLNQPVPELQPIGSVSLLGALPTEGDPQVAVAMIYGKPEDVFTCGLFSSTRGGFTM CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCEEE IYPFTEHATVLEGEVELTVAGQEPIRFSPGDSWFVEQGTEVAWKVLTPRFVKHYLAKVES EEECCCCCEEEECEEEEEEECCCCEEECCCCCEEEECCCEEEEEECCHHHHHHHHHHHHH HKQG CCCC >Mature Secondary Structure MQAFKLNQPVPELQPIGSVSLLGALPTEGDPQVAVAMIYGKPEDVFTCGLFSSTRGGFTM CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCEEE IYPFTEHATVLEGEVELTVAGQEPIRFSPGDSWFVEQGTEVAWKVLTPRFVKHYLAKVES EEECCCCCEEEECEEEEEEECCCCEEECCCCCEEEECCCEEEEEECCHHHHHHHHHHHHH HKQG CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA