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The map label for this gene is yohM [H]

Identifier: 16766326

GI number: 16766326

Start: 3184177

End: 3185043

Strand: Direct

Name: yohM [H]

Synonym: STM3024

Alternate gene names: 16766326

Gene position: 3184177-3185043 (Clockwise)

Preceding gene: 16766324

Following gene: 16766338

Centisome position: 65.55

GC content: 53.86

Gene sequence:

>867_bases
ATGGGTGAATTTTCGACACTTCTTCAGCAAGGAAACGGCTGGTTCTTCATTCCCAGCGCCATTTTATTAGGTATTTTGCA
CGGGCTTGAACCAGGGCACTCCAAAACTATGATGGCGGCTTTTATCATTGCCATTAAAGGTACGGTTAAACAGGCCGTCA
TGCTCGGTCTGGCAGCAACGCTTTCTCATACCGCGATCGTCTGGTTAATCGCGCTGGGTGGGATGTATCTTAGCCGGGCA
TTCACCGCACAATCAGTGGAACCATGGCTGCAGTTAATTTCTGCGATTATTATTCTGAGCACCGCGTGCTGGATGTTCTG
GCGGACATGGCGAGGCGAGCAGCAGTGGCTGGCGGGAAACCACCATCACGACCACGACCACGACCACGACCACGACCACG
ACCACGACCACGACCACGACCACGACCACGACCACGACCACGACCATCATGGTCACATACATCCGGAAGGTGCAACGTCA
AAAGCGTATCAGGATGCCCATGAACGCGCCCATGCTGCCGATATTCAACGCCGTTTTGATGGTCAAACAGTGACTAATGG
ACAGATCCTGCTATTCGGCCTGACCGGAGGGCTTATCCCCTGTCCGGCTGCGATCACCGTTTTACTGATTTGTATCCAGC
TTAAAGCGTTTACGCTGGGCGCCACGATGGTGCTGAGCTTTAGTCTTGGCCTGGCATTAACACTGGTGACGGTAGGCGTG
GGCGCGGCGATAAGCGTTCAACAGGCAGCAAAGCGCTGGAGTGGTTTTTCGACGCTTGCCCGGCGGGCGCCCTATTTTTC
GAGCATTCTGATTGGTCTGGTCGGCGTGTATATGGGAATTCATGGCTATACCGGGATCATGCAGTAA

Upstream 100 bases:

>100_bases
ACGAATACAAATTATAGCATTACGATGCTACTGGGGGGTAGTATTCTATACTGGGGGGGAGTAGAATGACGCCCACATAA
AACAACTAAGAATCATTCTC

Downstream 100 bases:

>100_bases
ATATGTAACGCTTCTGCTCAGGCCGTATCATTCACGTCGGGTTTCATTCCAGAAGCGTTTTTACTTATCAAACGGTATGA
AAGGCCATACATTCAGCGTC

Product: nickel/cobalt efflux protein RcnA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MGEFSTLLQQGNGWFFIPSAILLGILHGLEPGHSKTMMAAFIIAIKGTVKQAVMLGLAATLSHTAIVWLIALGGMYLSRA
FTAQSVEPWLQLISAIIILSTACWMFWRTWRGEQQWLAGNHHHDHDHDHDHDHDHDHDHDHDHDHDHDHHGHIHPEGATS
KAYQDAHERAHAADIQRRFDGQTVTNGQILLFGLTGGLIPCPAAITVLLICIQLKAFTLGATMVLSFSLGLALTLVTVGV
GAAISVQQAAKRWSGFSTLARRAPYFSSILIGLVGVYMGIHGYTGIMQ

Sequences:

>Translated_288_residues
MGEFSTLLQQGNGWFFIPSAILLGILHGLEPGHSKTMMAAFIIAIKGTVKQAVMLGLAATLSHTAIVWLIALGGMYLSRA
FTAQSVEPWLQLISAIIILSTACWMFWRTWRGEQQWLAGNHHHDHDHDHDHDHDHDHDHDHDHDHDHDHHGHIHPEGATS
KAYQDAHERAHAADIQRRFDGQTVTNGQILLFGLTGGLIPCPAAITVLLICIQLKAFTLGATMVLSFSLGLALTLVTVGV
GAAISVQQAAKRWSGFSTLARRAPYFSSILIGLVGVYMGIHGYTGIMQ
>Mature_287_residues
GEFSTLLQQGNGWFFIPSAILLGILHGLEPGHSKTMMAAFIIAIKGTVKQAVMLGLAATLSHTAIVWLIALGGMYLSRAF
TAQSVEPWLQLISAIIILSTACWMFWRTWRGEQQWLAGNHHHDHDHDHDHDHDHDHDHDHDHDHDHDHHGHIHPEGATSK
AYQDAHERAHAADIQRRFDGQTVTNGQILLFGLTGGLIPCPAAITVLLICIQLKAFTLGATMVLSFSLGLALTLVTVGVG
AAISVQQAAKRWSGFSTLARRAPYFSSILIGLVGVYMGIHGYTGIMQ

Specific function: Efflux system for nickel and cobalt [H]

COG id: COG2215

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NiCoT transporter (TC 2.A.52) family. RcnA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788423, Length=288, Percent_Identity=75, Blast_Score=408, Evalue=1e-115,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011541 [H]

Pfam domain/function: PF03824 NicO [H]

EC number: NA

Molecular weight: Translated: 31542; Mature: 31410

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEFSTLLQQGNGWFFIPSAILLGILHGLEPGHSKTMMAAFIIAIKGTVKQAVMLGLAAT
CCHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSHTAIVWLIALGGMYLSRAFTAQSVEPWLQLISAIIILSTACWMFWRTWRGEQQWLAGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC
HHHDHDHDHDHDHDHDHDHDHDHDHDHDHHGHIHPEGATSKAYQDAHERAHAADIQRRFD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
GQTVTNGQILLFGLTGGLIPCPAAITVLLICIQLKAFTLGATMVLSFSLGLALTLVTVGV
CCEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GAAISVQQAAKRWSGFSTLARRAPYFSSILIGLVGVYMGIHGYTGIMQ
CCHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GEFSTLLQQGNGWFFIPSAILLGILHGLEPGHSKTMMAAFIIAIKGTVKQAVMLGLAAT
CHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSHTAIVWLIALGGMYLSRAFTAQSVEPWLQLISAIIILSTACWMFWRTWRGEQQWLAGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC
HHHDHDHDHDHDHDHDHDHDHDHDHDHDHHGHIHPEGATSKAYQDAHERAHAADIQRRFD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
GQTVTNGQILLFGLTGGLIPCPAAITVLLICIQLKAFTLGATMVLSFSLGLALTLVTVGV
CCEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GAAISVQQAAKRWSGFSTLARRAPYFSSILIGLVGVYMGIHGYTGIMQ
CCHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA