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The map label for this gene is nrdI

Identifier: 16766117

GI number: 16766117

Start: 2952099

End: 2952509

Strand: Direct

Name: nrdI

Synonym: STM2806

Alternate gene names: 16766117

Gene position: 2952099-2952509 (Clockwise)

Preceding gene: 16766116

Following gene: 16766118

Centisome position: 60.77

GC content: 56.93

Gene sequence:

>411_bases
ATGAGCGCGCTCGTCTACTTCTCCAGCAGCTCTGAAAATACGCACCGCTTTATGCAGCGTCTGGGGCTGCCTGCCACGCG
TATTCCGCTCAATGAGCGGGAGCGAATTCAGGTAGACGAACCGTACATTCTGGTTGTGCCGTCATACGGCGGCGGCGGGA
TGGCCGGTGCGGTGCCGCGACAGGTGATCCGCTTTTTAAATGATGAACACAACCGGGCGCGCATTCGCGGCGTTATCGCC
TCCGGTAATCGCAATTTCGGCGATGCCTGGGGATGCGCTGGCGATGTGATAGCACAAAAATGCGGCGTCCCCTGGCTGTA
CCGCTTTGAGCTCATGGGCACACAACGCGACATCGATAATGTCCGAAAAGGAGTAAATGAATTTTGGCAACAACTACCCC
GGAGCGCGTAA

Upstream 100 bases:

>100_bases
TTCGTCAATTACCGGTGGTGATGGCGGGCGATTTGAGCTGGTCTGGCTTCCGCCCGGACATGATTAACCGTCTGCACCCG
ACACCCCACGCGGCAAACGC

Downstream 100 bases:

>100_bases
TGCAGGAAACCATGGATTACCACGCCCTGAACGCGATGCTGAATCTTTACGATAAAGCAGGCCATATTCAGTTCGACAAG
GACCAGCAGGCGATCGACGC

Product: ribonucleotide reductase stimulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MSALVYFSSSSENTHRFMQRLGLPATRIPLNERERIQVDEPYILVVPSYGGGGMAGAVPRQVIRFLNDEHNRARIRGVIA
SGNRNFGDAWGCAGDVIAQKCGVPWLYRFELMGTQRDIDNVRKGVNEFWQQLPRSA

Sequences:

>Translated_136_residues
MSALVYFSSSSENTHRFMQRLGLPATRIPLNERERIQVDEPYILVVPSYGGGGMAGAVPRQVIRFLNDEHNRARIRGVIA
SGNRNFGDAWGCAGDVIAQKCGVPWLYRFELMGTQRDIDNVRKGVNEFWQQLPRSA
>Mature_135_residues
SALVYFSSSSENTHRFMQRLGLPATRIPLNERERIQVDEPYILVVPSYGGGGMAGAVPRQVIRFLNDEHNRARIRGVIAS
GNRNFGDAWGCAGDVIAQKCGVPWLYRFELMGTQRDIDNVRKGVNEFWQQLPRSA

Specific function: Probably involved in ribonucleotide reductase function

COG id: COG1780

COG function: function code F; Protein involved in ribonucleotide reduction

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nrdI family

Homologues:

Organism=Escherichia coli, GI1789029, Length=136, Percent_Identity=85.2941176470588, Blast_Score=243, Evalue=2e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NRDI_SALA4 (B5F333)

Other databases:

- EMBL:   CP001138
- RefSeq:   YP_002147706.1
- ProteinModelPortal:   B5F333
- SMR:   B5F333
- GeneID:   6795958
- GenomeReviews:   CP001138_GR
- KEGG:   sea:SeAg_B2923
- HOGENOM:   HBG697191
- OMA:   FELMGTA
- ProtClustDB:   PRK03600
- HAMAP:   MF_00128
- InterPro:   IPR020852
- InterPro:   IPR004465
- PIRSF:   PIRSF005087
- TIGRFAMs:   TIGR00333

Pfam domain/function: PF07972 Flavodoxin_NdrI

EC number: NA

Molecular weight: Translated: 15325; Mature: 15193

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALVYFSSSSENTHRFMQRLGLPATRIPLNERERIQVDEPYILVVPSYGGGGMAGAVPR
CCEEEEEECCCCHHHHHHHHHCCCCEECCCCCCCEEEECCCEEEEEECCCCCCCCHHHHH
QVIRFLNDEHNRARIRGVIASGNRNFGDAWGCAGDVIAQKCGVPWLYRFELMGTQRDIDN
HHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCHHH
VRKGVNEFWQQLPRSA
HHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SALVYFSSSSENTHRFMQRLGLPATRIPLNERERIQVDEPYILVVPSYGGGGMAGAVPR
CEEEEEECCCCHHHHHHHHHCCCCEECCCCCCCEEEECCCEEEEEECCCCCCCCHHHHH
QVIRFLNDEHNRARIRGVIASGNRNFGDAWGCAGDVIAQKCGVPWLYRFELMGTQRDIDN
HHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCHHH
VRKGVNEFWQQLPRSA
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA