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The map label for this gene is ygaW [H]

Identifier: 16766111

GI number: 16766111

Start: 2948325

End: 2948774

Strand: Direct

Name: ygaW [H]

Synonym: STM2800

Alternate gene names: 16766111

Gene position: 2948325-2948774 (Clockwise)

Preceding gene: 16766109

Following gene: 16766113

Centisome position: 60.7

GC content: 50.22

Gene sequence:

>450_bases
ATGTTCTCTCCACAGTCACGCTTGCGTCATGCCGTAGCAGACACGTTTGCGATGGTTGTTTACTGTTCTGTTGTGAACAT
GTTGATCGAGATATTCCTCTCCGGAATGAGCTTTGAGCAGTCGCTTTCTTCCAGGCTGGTGGCGATACCTGTCAACATTT
TGATTGCATGGCCATACGGCGTTTACCGCGATCTGATTATGCGCGTCGCGCGTAAGGCAAGCCCGGCGGGATGGGCCAAA
AACCTGGCGGATGTATTGGCTTATGTCACCTTTCAGTCACCCGTTTATATTATCATCTTGCTGACCGTCGGTGCCGGCTG
GCATCAGATAGTGGCCGCCGTGAGTTCAAACATTGTTGTTTCAATGTTAATGGGCGCGGTTTATGGCTACTTCCTGGATT
ATTGTCGCCGCCTGTTTAAAGTGAGCAGCTATCATCAGGCTAAGGCGTAA

Upstream 100 bases:

>100_bases
TATTATATAGGGATATACTCTATGCAAAGACAAAAGTGCTTTATGATTTCACTACCAACCATCACCTCATTCTGATCGAT
ACGCTACAAGGAGCATTAAC

Downstream 100 bases:

>100_bases
GTTAGCGTCGCGACTGGCATTGCCAGTCGCGCTTTTAGTCGGTTTTTTCGTCGCCAAAAAGCCCATTCAGATAACGTTCT
AACGCTATTCGGGAGCTAAA

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MFSPQSRLRHAVADTFAMVVYCSVVNMLIEIFLSGMSFEQSLSSRLVAIPVNILIAWPYGVYRDLIMRVARKASPAGWAK
NLADVLAYVTFQSPVYIIILLTVGAGWHQIVAAVSSNIVVSMLMGAVYGYFLDYCRRLFKVSSYHQAKA

Sequences:

>Translated_149_residues
MFSPQSRLRHAVADTFAMVVYCSVVNMLIEIFLSGMSFEQSLSSRLVAIPVNILIAWPYGVYRDLIMRVARKASPAGWAK
NLADVLAYVTFQSPVYIIILLTVGAGWHQIVAAVSSNIVVSMLMGAVYGYFLDYCRRLFKVSSYHQAKA
>Mature_149_residues
MFSPQSRLRHAVADTFAMVVYCSVVNMLIEIFLSGMSFEQSLSSRLVAIPVNILIAWPYGVYRDLIMRVARKASPAGWAK
NLADVLAYVTFQSPVYIIILLTVGAGWHQIVAAVSSNIVVSMLMGAVYGYFLDYCRRLFKVSSYHQAKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789025, Length=149, Percent_Identity=87.248322147651, Blast_Score=270, Evalue=2e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010574
- ProDom:   PD090021 [H]

Pfam domain/function: PF06610 DUF1144 [H]

EC number: NA

Molecular weight: Translated: 16605; Mature: 16605

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSPQSRLRHAVADTFAMVVYCSVVNMLIEIFLSGMSFEQSLSSRLVAIPVNILIAWPYG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHEEECCHH
VYRDLIMRVARKASPAGWAKNLADVLAYVTFQSPVYIIILLTVGAGWHQIVAAVSSNIVV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHEEHHHHHCCCHHHHHHHHHHHHHH
SMLMGAVYGYFLDYCRRLFKVSSYHQAKA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFSPQSRLRHAVADTFAMVVYCSVVNMLIEIFLSGMSFEQSLSSRLVAIPVNILIAWPYG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHEEECCHH
VYRDLIMRVARKASPAGWAKNLADVLAYVTFQSPVYIIILLTVGAGWHQIVAAVSSNIVV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHEEHHHHHCCCHHHHHHHHHHHHHH
SMLMGAVYGYFLDYCRRLFKVSSYHQAKA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]