| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
Click here to switch to the map view.
The map label for this gene is 16766072
Identifier: 16766072
GI number: 16766072
Start: 2900439
End: 2901314
Strand: Direct
Name: 16766072
Synonym: STM2760
Alternate gene names: NA
Gene position: 2900439-2901314 (Clockwise)
Preceding gene: 16766071
Following gene: 16766073
Centisome position: 59.71
GC content: 57.42
Gene sequence:
>876_bases ATGTCGCGACTGGCGCAGGATATGAAAAAACTGGCGCACCGCGCAGGTGGCAGCCACAAAACCGTCCACGACCGCGAACA GATGGCGCAGCGTTTTGCCCGTCATTTGCTGGCGCAGAATATTCAGGTCACCAGCACCTGCCAGCTCAAAGCCAGACACA TCGCGGGATATATTCATGAATGGCTGGCGCAGGGTATTTCTCTGCGAACGCTACAGAATGAGATGGCAATGGTGCGCTCT ATTCTGGCTGAAGCCGGACGCACACAACTCAGCCAGTCAGAATTAATCAGCAACCAGTCGCTCGGTATCAGTGGTGCCAG CTGTGACGGGACGCACCGGGCCATTCCGGATGCACTTTACCATCAGGTACTGGACCGGGTTCATCATATCGACGCAGGCC TCGCAGCCAGCCTGCAACTGGCGCGGGTGATGGGGCTGCGCGGTCAGGAAGCAGTACAGTGCTGCCAGTCGCTGAAAACC TGGGATAAACAGCTGGAAAAAGGGGCTGAACGTCTGCCGGTGATCTTCGGCACCAAAGGCGGGCGACCACGCATGACACA GGTGACGGACCGGGAAGCGGTTCGTCAGGCAGTGAAAGAGGCGCTTGGGATTGCCGGGGAGCGTAACGGGCATCTCATTG ACAAGCCGGATCTGAAATCTGCAATGGACTACTGGCACAACCATCTCCGCGATACCGGGCTGACGGGGGAATACTCTCCC CACTCCCTGCGCTATGCCTGGGCGCAGGATGCGATCCGCTATTACGAAGAGCAGGGTCTGAGCCATAAAGAGGCGCTGGC GGTAACTTCAACGGATCTGGGCCATGGTGATGGGCGGGGAATATATATTGAGCAGGTATACGGGTATACTGATTGA
Upstream 100 bases:
>100_bases CCGGCGCACCGGTATTGTTTAGCATGGCGCAGCTTTCGCTCTCCCATGCATTCCCCACGCGCCGGAAAATATTGCTACCG CATCAGGCGGAGGAGTCAGC
Downstream 100 bases:
>100_bases ATCTCACTAATACAAGATGTTTCATTCCTTTTTGTATGTAAAAATTCATAACTACTTTAAAATTTTAAATGCACAATAAA AGTATAGATAGATAATGTGT
Product: integrase
Products: NA
Alternate protein names: Phage Integrase
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MSRLAQDMKKLAHRAGGSHKTVHDREQMAQRFARHLLAQNIQVTSTCQLKARHIAGYIHEWLAQGISLRTLQNEMAMVRS ILAEAGRTQLSQSELISNQSLGISGASCDGTHRAIPDALYHQVLDRVHHIDAGLAASLQLARVMGLRGQEAVQCCQSLKT WDKQLEKGAERLPVIFGTKGGRPRMTQVTDREAVRQAVKEALGIAGERNGHLIDKPDLKSAMDYWHNHLRDTGLTGEYSP HSLRYAWAQDAIRYYEEQGLSHKEALAVTSTDLGHGDGRGIYIEQVYGYTD
Sequences:
>Translated_291_residues MSRLAQDMKKLAHRAGGSHKTVHDREQMAQRFARHLLAQNIQVTSTCQLKARHIAGYIHEWLAQGISLRTLQNEMAMVRS ILAEAGRTQLSQSELISNQSLGISGASCDGTHRAIPDALYHQVLDRVHHIDAGLAASLQLARVMGLRGQEAVQCCQSLKT WDKQLEKGAERLPVIFGTKGGRPRMTQVTDREAVRQAVKEALGIAGERNGHLIDKPDLKSAMDYWHNHLRDTGLTGEYSP HSLRYAWAQDAIRYYEEQGLSHKEALAVTSTDLGHGDGRGIYIEQVYGYTD >Mature_290_residues SRLAQDMKKLAHRAGGSHKTVHDREQMAQRFARHLLAQNIQVTSTCQLKARHIAGYIHEWLAQGISLRTLQNEMAMVRSI LAEAGRTQLSQSELISNQSLGISGASCDGTHRAIPDALYHQVLDRVHHIDAGLAASLQLARVMGLRGQEAVQCCQSLKTW DKQLEKGAERLPVIFGTKGGRPRMTQVTDREAVRQAVKEALGIAGERNGHLIDKPDLKSAMDYWHNHLRDTGLTGEYSPH SLRYAWAQDAIRYYEEQGLSHKEALAVTSTDLGHGDGRGIYIEQVYGYTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32410; Mature: 32279
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLAQDMKKLAHRAGGSHKTVHDREQMAQRFARHLLAQNIQVTSTCQLKARHIAGYIHE CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH WLAQGISLRTLQNEMAMVRSILAEAGRTQLSQSELISNQSLGISGASCDGTHRAIPDALY HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH HQVLDRVHHIDAGLAASLQLARVMGLRGQEAVQCCQSLKTWDKQLEKGAERLPVIFGTKG HHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC GRPRMTQVTDREAVRQAVKEALGIAGERNGHLIDKPDLKSAMDYWHNHLRDTGLTGEYSP CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC HSLRYAWAQDAIRYYEEQGLSHKEALAVTSTDLGHGDGRGIYIEQVYGYTD CHHHHHHHHHHHHHHHHHCCCHHHHHEEECCCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure SRLAQDMKKLAHRAGGSHKTVHDREQMAQRFARHLLAQNIQVTSTCQLKARHIAGYIHE CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH WLAQGISLRTLQNEMAMVRSILAEAGRTQLSQSELISNQSLGISGASCDGTHRAIPDALY HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH HQVLDRVHHIDAGLAASLQLARVMGLRGQEAVQCCQSLKTWDKQLEKGAERLPVIFGTKG HHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC GRPRMTQVTDREAVRQAVKEALGIAGERNGHLIDKPDLKSAMDYWHNHLRDTGLTGEYSP CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC HSLRYAWAQDAIRYYEEQGLSHKEALAVTSTDLGHGDGRGIYIEQVYGYTD CHHHHHHHHHHHHHHHHHCCCHHHHHEEECCCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA