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The map label for this gene is rseB [H]

Identifier: 16765958

GI number: 16765958

Start: 2777790

End: 2778746

Strand: Reverse

Name: rseB [H]

Synonym: STM2638

Alternate gene names: 16765958

Gene position: 2778746-2777790 (Counterclockwise)

Preceding gene: 16765959

Following gene: 16765957

Centisome position: 57.21

GC content: 55.17

Gene sequence:

>957_bases
ATGAAGCAACTTTGGTTTGCCATGTCCCTTGTGGCGGCTAGCCTGTTCTTCTCAGCAAACGCCTCGGCCGACCCTGCGTC
CGGGGCGTTATTGCAGCAGATGAACATCGCCAGTCAGTCACTGAATTACGAGCTGTCATTCGTCAGCATCACGAAACAAG
GCGTTGAATCTCTGCGTTATCGACACGCACGCCTGGATGGTCGCCCGCTTGCGCAATTGCTACAGTTGGACGGTCCCCGC
CGGGAGGTCGTACAGCGTGGTAATGAAATCAGTTATTTTGAACCGGGCCTTGAGCCGTTCACCCTGAACGGTGATTATAT
TGTCGATTCTCTGCCTTCCCTGATTTACACCGACTTTAAGCGCCTGGCGCCTTACTACGACTTTATTTCTGTCGGACGCA
CCCGTATCGCAGACAGATTGTGCGAAGTTATCCGCGTTGTGGCGCGCGATGGTACGCGTTACAGCTATATCGTCTGGATG
GACATGGACACCAAACTGCCGATGCGCGTTGATCTGCTGGATCGCGATGGCGAGACGCTGGAGCAGTTCCGCGTTATTGC
GTTCACGGTGAGCCAGGATATCGGCAGCAACATGCAGGCGCTGGCGAAGGCGAATCTGCCGCCGCTGCTTTCTGTTCCCG
GTGGCGAAAAAACGAAATTTAACTGGAGTCCATCCTGGGTGCCGCAAGGCTTTAGCGAAGTTTCCAGCAGCCGTCGTCCG
TTGCCGACGATGGATAACCTGCCTATCGAATCGCGGCTTTATTCTGACGGTCTGTTTAGCTTTTCCGTCAATGTGAACCG
GGCGACGCAAAACAGCAGCGATCAGATGCTGCGCACCGGGCGCCGAACGGTTTATAGCAGCGTTCGCGACAACGCGGAAA
TCACCATTGTCGGCGAGCTTCCGCCGCAAACGGCGAAGCGCATTGCCGACAGTATCAAATTCAGGGCAGTACAATGA

Upstream 100 bases:

>100_bases
GCCGACTGCACTCCGAACAGCTTCAGTTTGAGCAGGCGCAAACCCAGCAAGCCGCGGTACAGGTGCCAGGAATCCAAACT
TTAGGAACGCAATCGCAGTA

Downstream 100 bases:

>100_bases
TTAAAGAGTGGGCAACCGTTGTCTCCTGGCAGAATGGTCAGGCGGTGGTGAGCTGCGACGTTAAAGCGTCATGCAGCAGC
TGCGCCTCCCGTGCGGGATG

Product: periplasmic negative regulator of sigmaE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MKQLWFAMSLVAASLFFSANASADPASGALLQQMNIASQSLNYELSFVSITKQGVESLRYRHARLDGRPLAQLLQLDGPR
REVVQRGNEISYFEPGLEPFTLNGDYIVDSLPSLIYTDFKRLAPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWM
DMDTKLPMRVDLLDRDGETLEQFRVIAFTVSQDIGSNMQALAKANLPPLLSVPGGEKTKFNWSPSWVPQGFSEVSSSRRP
LPTMDNLPIESRLYSDGLFSFSVNVNRATQNSSDQMLRTGRRTVYSSVRDNAEITIVGELPPQTAKRIADSIKFRAVQ

Sequences:

>Translated_318_residues
MKQLWFAMSLVAASLFFSANASADPASGALLQQMNIASQSLNYELSFVSITKQGVESLRYRHARLDGRPLAQLLQLDGPR
REVVQRGNEISYFEPGLEPFTLNGDYIVDSLPSLIYTDFKRLAPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWM
DMDTKLPMRVDLLDRDGETLEQFRVIAFTVSQDIGSNMQALAKANLPPLLSVPGGEKTKFNWSPSWVPQGFSEVSSSRRP
LPTMDNLPIESRLYSDGLFSFSVNVNRATQNSSDQMLRTGRRTVYSSVRDNAEITIVGELPPQTAKRIADSIKFRAVQ
>Mature_318_residues
MKQLWFAMSLVAASLFFSANASADPASGALLQQMNIASQSLNYELSFVSITKQGVESLRYRHARLDGRPLAQLLQLDGPR
REVVQRGNEISYFEPGLEPFTLNGDYIVDSLPSLIYTDFKRLAPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWM
DMDTKLPMRVDLLDRDGETLEQFRVIAFTVSQDIGSNMQALAKANLPPLLSVPGGEKTKFNWSPSWVPQGFSEVSSSRRP
LPTMDNLPIESRLYSDGLFSFSVNVNRATQNSSDQMLRTGRRTVYSSVRDNAEITIVGELPPQTAKRIADSIKFRAVQ

Specific function: Seems to modulate the activity of rpoE (sigma-E) [H]

COG id: COG3026

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseB family [H]

Homologues:

Organism=Escherichia coli, GI1788924, Length=318, Percent_Identity=89.3081761006289, Blast_Score=590, Evalue=1e-170,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005588 [H]

Pfam domain/function: PF03888 MucB_RseB [H]

EC number: NA

Molecular weight: Translated: 35768; Mature: 35768

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLWFAMSLVAASLFFSANASADPASGALLQQMNIASQSLNYELSFVSITKQGVESLRY
CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHH
RHARLDGRPLAQLLQLDGPRREVVQRGNEISYFEPGLEPFTLNGDYIVDSLPSLIYTDFK
HHHCCCCHHHHHHHHCCCCHHHHHHCCCCCCEECCCCCEEEECCCHHHHHHHHHHHHHHH
RLAPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWMDMDTKLPMRVDLLDRDGETL
HHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEECCCCHHH
EQFRVIAFTVSQDIGSNMQALAKANLPPLLSVPGGEKTKFNWSPSWVPQGFSEVSSSRRP
HHHEEEEEEECHHHCCCHHHHHHCCCCCEEECCCCCCEEECCCCCCCCCCHHHHHHCCCC
LPTMDNLPIESRLYSDGLFSFSVNVNRATQNSSDQMLRTGRRTVYSSVRDNAEITIVGEL
CCCCCCCCHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC
PPQTAKRIADSIKFRAVQ
CHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MKQLWFAMSLVAASLFFSANASADPASGALLQQMNIASQSLNYELSFVSITKQGVESLRY
CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHH
RHARLDGRPLAQLLQLDGPRREVVQRGNEISYFEPGLEPFTLNGDYIVDSLPSLIYTDFK
HHHCCCCHHHHHHHHCCCCHHHHHHCCCCCCEECCCCCEEEECCCHHHHHHHHHHHHHHH
RLAPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWMDMDTKLPMRVDLLDRDGETL
HHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEECCCCHHH
EQFRVIAFTVSQDIGSNMQALAKANLPPLLSVPGGEKTKFNWSPSWVPQGFSEVSSSRRP
HHHEEEEEEECHHHCCCHHHHHHCCCCCEEECCCCCCEEECCCCCCCCCCHHHHHHCCCC
LPTMDNLPIESRLYSDGLFSFSVNVNRATQNSSDQMLRTGRRTVYSSVRDNAEITIVGEL
CCCCCCCCHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC
PPQTAKRIADSIKFRAVQ
CHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]