| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
Click here to switch to the map view.
The map label for this gene is ycgK [H]
Identifier: 16765931
GI number: 16765931
Start: 2758320
End: 2758721
Strand: Direct
Name: ycgK [H]
Synonym: STM2610
Alternate gene names: 16765931
Gene position: 2758320-2758721 (Clockwise)
Preceding gene: 16765920
Following gene: 16765935
Centisome position: 56.79
GC content: 41.79
Gene sequence:
>402_bases ATGAAATTCAAGAGTATTGCTAAAACTGTTTTTCTTTTTGCACTGCTAACCTCAGCTGGCTTTGCAACTGGTAAAAACGT GAATGTCGAATTCGATAAAGGACAAAATAGCGCCCGCTATTCCGGCGTAATAAAGGGATACGATTACGATACATATAACT TCCAGGCCAGAAAGGGGCAGAAAGTACATGTAAGTATTTCGAATGAAGGCGCAGATACCTACCTGTTCGGGCCAGGAATT AGCGATTCCGTTGACCTGTCCAGATATTCATCTGAACTGGATGGCAATGGCCAGTACACGCTACCGGCGTCCGGAAAATA CGAACTGAAAGTACTTCAGACACGTAATGAAGCTCGTAAAAACAAAGCGAAAAAATACAGCGTCAATATTCAGATAAAAT AA
Upstream 100 bases:
>100_bases GTAACAGGCAGAATTCCCGGAAAGGACCCTGGAAAAAACCGAACAGTTATTGTTACAATATAACAATTAATCATTTTAAC GCTGACTGAGGGTCTTACAT
Downstream 100 bases:
>100_bases ATGCCAGCCTGGTCAGGGGGTTCGTTCCAACACCAAACTTTTCAGCCACTGGGTTATTTCATGAGGTGTACCAGTTTTTA GCGTCTGGTTACGTTTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MKFKSIAKTVFLFALLTSAGFATGKNVNVEFDKGQNSARYSGVIKGYDYDTYNFQARKGQKVHVSISNEGADTYLFGPGI SDSVDLSRYSSELDGNGQYTLPASGKYELKVLQTRNEARKNKAKKYSVNIQIK
Sequences:
>Translated_133_residues MKFKSIAKTVFLFALLTSAGFATGKNVNVEFDKGQNSARYSGVIKGYDYDTYNFQARKGQKVHVSISNEGADTYLFGPGI SDSVDLSRYSSELDGNGQYTLPASGKYELKVLQTRNEARKNKAKKYSVNIQIK >Mature_133_residues MKFKSIAKTVFLFALLTSAGFATGKNVNVEFDKGQNSARYSGVIKGYDYDTYNFQARKGQKVHVSISNEGADTYLFGPGI SDSVDLSRYSSELDGNGQYTLPASGKYELKVLQTRNEARKNKAKKYSVNIQIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787426, Length=133, Percent_Identity=80.4511278195489, Blast_Score=208, Evalue=1e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007280 [H]
Pfam domain/function: PF04151 PPC [H]
EC number: NA
Molecular weight: Translated: 14755; Mature: 14755
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKSIAKTVFLFALLTSAGFATGKNVNVEFDKGQNSARYSGVIKGYDYDTYNFQARKGQ CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEECEEEECCCCCCCEEEECCCC KVHVSISNEGADTYLFGPGISDSVDLSRYSSELDGNGQYTLPASGKYELKVLQTRNEARK EEEEEECCCCCCEEEECCCCCCCCCHHHHHHCCCCCCCEEECCCCCEEEEEEECCCHHHH NKAKKYSVNIQIK CCCEEEEEEEEEC >Mature Secondary Structure MKFKSIAKTVFLFALLTSAGFATGKNVNVEFDKGQNSARYSGVIKGYDYDTYNFQARKGQ CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEECEEEECCCCCCCEEEECCCC KVHVSISNEGADTYLFGPGISDSVDLSRYSSELDGNGQYTLPASGKYELKVLQTRNEARK EEEEEECCCCCCEEEECCCCCCCCCHHHHHHCCCCCCCEEECCCCCEEEEEEECCCHHHH NKAKKYSVNIQIK CCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]