| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16765919
Identifier: 16765919
GI number: 16765919
Start: 2747787
End: 2748188
Strand: Reverse
Name: 16765919
Synonym: STM2598
Alternate gene names: NA
Gene position: 2748188-2747787 (Counterclockwise)
Preceding gene: 16765921
Following gene: 16765918
Centisome position: 56.58
GC content: 50.5
Gene sequence:
>402_bases ATGAGCAAACACACATTAATCCGCCGGGCCGTTCTGGAAAAGCTGGAATCCGTGACTGGCGCACCTGTCACTCTTTTTGA TGGACTTCCTGCTTTCGTAGAACAGGAAGATTTACCCGCAATAGCTGTCTGGCTGACAGACGCACAGTATACAGGCCTTA TGACCGATGAGGATGACTGGCAGGCTACTCTCCATACGGCAGTTTTTCTGAGGGCTCAGGCTCCTGATACAGAGCTTGAT ATCTGGATGGAAGAAAAAATCTTTCCTGCGCTGGAAGAGGTTAGTGGTCTGGAGCGCCTTATCGATACCATGACCCCGCT GGGTTATGACTACCAGCGTGACAGCGAAATGGCAACGTGGGGGATGGCAGAAATTACTTACCGGATCACCTATACCAACT GA
Upstream 100 bases:
>100_bases ATATTAAAGAGGAAAATGTGATTATGCAAAAGACAGTTAGCCGGAAAACCGCCTCCTTTCCTCCCCGGCCTTCAGGCCGG GGAGGAAAGGAGGCATTCTG
Downstream 100 bases:
>100_bases GGAGGATATGATGGGAACACCAAACCCACTGGTAAAAACGAAAGGCGCCGGAACCACATTCTGGCTGTATACCGGCAGCG GCGATGCGTTTAAAAATCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Minor Tail Protein U; Tail Component Of Prophage; Gifsy-1 Prophage VmtU; Minor Tail U
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MSKHTLIRRAVLEKLESVTGAPVTLFDGLPAFVEQEDLPAIAVWLTDAQYTGLMTDEDDWQATLHTAVFLRAQAPDTELD IWMEEKIFPALEEVSGLERLIDTMTPLGYDYQRDSEMATWGMAEITYRITYTN
Sequences:
>Translated_133_residues MSKHTLIRRAVLEKLESVTGAPVTLFDGLPAFVEQEDLPAIAVWLTDAQYTGLMTDEDDWQATLHTAVFLRAQAPDTELD IWMEEKIFPALEEVSGLERLIDTMTPLGYDYQRDSEMATWGMAEITYRITYTN >Mature_132_residues SKHTLIRRAVLEKLESVTGAPVTLFDGLPAFVEQEDLPAIAVWLTDAQYTGLMTDEDDWQATLHTAVFLRAQAPDTELDI WMEEKIFPALEEVSGLERLIDTMTPLGYDYQRDSEMATWGMAEITYRITYTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15147; Mature: 15016
Theoretical pI: Translated: 3.96; Mature: 3.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKHTLIRRAVLEKLESVTGAPVTLFDGLPAFVEQEDLPAIAVWLTDAQYTGLMTDEDDW CCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHCCCCCCEEEEEEECCCCCCCCCCCCHH QATLHTAVFLRAQAPDTELDIWMEEKIFPALEEVSGLERLIDTMTPLGYDYQRDSEMATW HHHHHHHEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHC GMAEITYRITYTN CEEEEEEEEEECC >Mature Secondary Structure SKHTLIRRAVLEKLESVTGAPVTLFDGLPAFVEQEDLPAIAVWLTDAQYTGLMTDEDDW CCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHCCCCCCEEEEEEECCCCCCCCCCCCHH QATLHTAVFLRAQAPDTELDIWMEEKIFPALEEVSGLERLIDTMTPLGYDYQRDSEMATW HHHHHHHEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHC GMAEITYRITYTN CEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA