| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is shdA [H]
Identifier: 16765833
GI number: 16765833
Start: 2627589
End: 2633708
Strand: Reverse
Name: shdA [H]
Synonym: STM2513
Alternate gene names: 16765833
Gene position: 2633708-2627589 (Counterclockwise)
Preceding gene: 16765834
Following gene: 16765831
Centisome position: 54.22
GC content: 58.07
Gene sequence:
>6120_bases GTGCGAAATATGTATGTCGTGGCTTCAGAACTGGCGCGAGGCCACAGCAAAGTTAAAGCGCAAGTATGCGCGAGTGAAAC CCATTCTCCAAACCAAAAGTCCGAATATGGACAAATAATAAAAGCAACGCGCGCGGCGCTGGCTTGCGCCGTGGCTGCGG CGCTCGGATTTTTCAGCCCGCTGGCTATGGCCGATAATCAGGTATCATATGCTGATGCGCAGCCCCACGTTCTGGATGCG TCAACGCCGCCGATAAGCTATTCGGGCACCGATGAAGGCGCGGCGCTATATGTCTCGGGTGTCGCCACCGTCGGCTGGCA GCCCACCACGGTCACAGGGACGGGGCTCGTCATTGAAACAAGCGGAGGCGGGGCTGATGATCCGGATGGCGGTAAGTATG TTTCCAACGCCATTTCGCTGGATCATTACGCTATCCTTGAGCTTACCGACGCGAAGATAACCACTACGGGTATTTATACC CAGGGTATTTCCGCAGCGGATGGCAGCACACTGAGGTTAACAGACAGTACGCTAACGATTGACGGCAATTTCGGCGTAAT GACGTTGTATACGGGTTCAGAAGCAACGCTGGACGGTACCATCGTTGAGGCAGCTAACAGCAGCAGCGCGCAGGTGCAAC AAGGCAGTACGCTGAACGTGCTGGACGGTAGCACAATCACCCTGGCGCAAGGCCAGATAAACGTTGTTGCCGGAAACACC GCGACAGACGAGGGTTCCACCCTGAACCTGTCTGATAGCTCGGTCAGCTCTGCAGGTACGATGAGCACCATCCAGGGTAC CAATAAGGCCGCTCTTAATCTCACCAACGCGACCATAACACATACCAATGCCAGCGGCGCGGCGGTACAGGCCAATAACG CCACTACCCTGGATATTACAGGCGGCAACATTACCTCTGCCGGTACGGGCGTGTATATTCTGGCGTCGGACGCCAGGATC GACGGCGCCACCATCAACGCCGACGGCGACGGTATCTTTATAACCAGCAAAAGAAAACTCGACGGGTATGAGGATCTCAA CGCGCTGACGGTCAGCGACGCAAACGTCACCTCAAAAACTGTCGCACTGAACATTGATGGCAGCACGACCATTAACGACC CCATTGAGCTCACCAACAGCACCTTTACGGCGCCGACCGCGATCAAATTAGGCAGCAAAGCGACTATTCAGGCCGAAAAA ACGATGCTGACCGGCAACATTGTCCAGACTGACGCGTCATCGTCATCGCTCTCTTTAAGCCAGGGGTCCACGTTAACCGG TAGTGTAGATGCGATGTTTACTACGCTGTCGCTCGACGACACCAGCCAGTGGAACATGACCGACCCGTCAACCGTCGGCA ATCTGACCAACGACGGCGATATTACGCTGGGCAACGCGAGCGGTTCGACAGGTACGCTGCTGACGGTGGACAATACCCTG ACCTTGCAGGACGGCAGCCAGATAAACGCGACGCTGGATACCGCCAACAGCGCGCCAATTATCAAAGCCGCCAACGTCAC GCTGGACGGGACGCTGAACCTTAGCTCAACGGCCACCTTTGTCGCGCCCGAAACCGACGAACACTTTGGATCGATCACGC TGATTGATTCGCAAACTGCAATCACTACCGATTTTGACAGCGTAACACTGGATGCTGACACCTCCGCTATGCCGGATTAT CTGACGATCAACGCGGGCGTTGATGCGAATGATAATACCAACTACGAGTTGTCTACGGGCTTGAGTTGGTACGCGGGCGC AAATTCTGCGCGCGCTGCGCATGGCACTTTTACCGTTGATGCAGGCAGTACCTTTACCGTCACCAGCGAACTGGACGAAA CCACGGCGACCTCCAACTGGAACGGCAGCAAGCTAACCAAACAAGGCGACGGCACGCTGATCCTCAGCAACACCGGCAAC GACTACGGCGATACTGAAATTGACGGCGGCATTCTGGCCGCCAAAGACGCCGCCGCGCTCGGCACTGGCGATGTGACGAT TGCAGAAAGCGCAACGCTTGCGCTGAGCCAGGGCACGCTGGATAACAACGTGACCGGCGAGGGCCAAATTGTCAAAAGCG GTAGCGATGAGCTGATCGTGACCGGCGATAACAACTACAGCGGCGGCACCACTATTTCCGGCGGTACGCTGACGGCTGAC CATGCGGATTCGCTGGGCAGCGGCGATATCGACAACAGCGGCGTGCTTAAGGTGGGCGAAGGCGAGCTGGAAAACATCCT TTCCGGCAGCGGCTCGCTGGTGAAAACCGGCACAGGCGAGCTGACGCTAAGCGGCGACAACACTTACTCCGGCGGCACCA CCATTACCGGCGGTACGCTGACGGCTGACCATGCGGATTCGCTGGGCAGCGGCGATATCGATAACAGCGGCGTGCTTAAG GTGGGCGAAGGCGATCTGGAAAATACGCTTTCCGGCAGCGGTTCGCTGGTGAAAACCGGTACCGGCGAGCTGACGTTAAG CGGCGGCAACGATTACTCCGGCGGCACCACCATTATCGGCGGTACGCTGACGGCTGACCATGCGGATTCGCTGGGTACCG GAGCTGTTGCCAACAGCGGCGTGCTTCAGGTCGGCGAGGGCGAGCTGGAAAATACGCTTTCCGGCAGCGGTTCGCTGGTC AAAACCGGTACGGGCGAACTGACGTTAAGCGGCGATAACAGTTACTCCGGCGGCACCACCATTATCGGCGGTACGCTGAC GGCTGACCATGCGGATTCGCTGGGTACCGGAGCTGTTGCCAACAGCGGTGTGCTTCAGGTCGGCGAGGGCGAGCTGGAAA ATACGCTTTCCGGCAGCGGTTCGCTGGTCAAAACCGGTACGGGCGAACTGACGTTAAGCGGCGATAACAGTTACTCCGGC GGCACCACCATTATCGGCGGTACGCTGACGGCTGACCATGCGGATTCGCTGGGTACCGGAGCTGTTGCCAACAGCGGTGT GCTTCAGGTCGGTGAGGGCGAGCTGGAAAATACGCTTTCCGGCAGCGGTTCGCTGGTCAAAACCGGTACCGGCGAGCTGA CGTTAGGCGGCGACAACAGCTATTCCGGCGCCACCACTATCACTGACGGCACGCTGATTGCCGCCAACGTCAACGCGCTG GGCAGCGGCAATATCGACAACAGCGGTACGCTGATACTGGATGCCAACGGCGCATTTGAGCTTGCGAACGTCACCACCCA TAGCGGCGCCACTACCGCGCTGGCAGCGGGCAGCACCCTTGACGCGGGCCAGTTCACCCAGGAAGACGGCAGTACGCTAA GTATTGACCTCGGCGCGGCCACCGACGACGCCGTGATTACCGCCGACAGCGTCGCGCTGGGCGGCACGCTGAATGTTACC GGCATTGGCAGCGTTACAGACAGCTGGACGCCTGAGGCATACACCTACACGCTGATTGGCAGCGACAGCGCCATTACGAC CGATTTCGACGATCTGACCGTCGCGGGAATGAATAGAGAAGATGTTGACTTCCTGACTATCGACGGAAAAGTCGATGAAG CAGACAACACCCACTATGATCTGACGGCCTCCCTCTCCTGGTATGCGGACAGAGACAACGCCACTACCGACGCCCACGGC ACCTTTACCCTGAGCGACCCTGACGGCAGCTTTAACGTTGCGGCTACACTGACAGACGTTGACGATACGCTGGATCCGGG TAGCAGATGGGACGGTAAATCGCTGACCAAAGAAGGCGCAGGCACGCTGATCCTCTCTGGCGACAACGACTACAGCGGCG GCACCACCATCAATGAAGGTACGCTGGTCGCCGCCAGTACGACGGCGCTGGGCACCGGTCTGGTAGACAATAATGCCACG CTGGTGCTGGACGCAGACGGTGAAGTCAGCGCGGTGGGCGGCATCACCACTCATAGCGGCGCGACGACCCAACTGGCGCT CGGCACCTCGTTGGATCTCGGCGACAGCGCGTTAATTCAGCAAGATGGCAGTACGCTGAACGTTGAGCTGAATAGTGACT CAGTGCAACCGCTGATTACCGGCAGCAGCGCCACGCTTGGCGGCGATTTGGTCGTCAGCGACGCCAGCCTGCAAGCGCGC GCCTCCGACGCGGAGTTCCAGTCCTTTAAACTGATGGATATGACCAGCGATATCAGCGGCGACTTTACCAGCCTGACGAT GAACCTCACTGACAAGCCGGACTATCTGACCGTAACCGGGACAATCAATCCTGAAGATGCGTCAGAATATCTGCTTACCG AAGGGCTGAGCTGGAATGCGACCGCCACGTCAGCGACGCCAGCACACGGCACGTTTACCCTGGGCGCAGGCGACAGTTTT GAAGTCACCAGCGTACTGGGCGATAAAACCGGCAACGGCGACTGGGACGGTAAATCGCTGACCAAACTGGGCGCGGGTAA ACTGACGCTGAGCGGCGCGAACACCTATAGCGGCGATACCAACGTACAGGAAGGCACGCTATGGCTGTCCGGAGACGGCT CGATTGGCGAGATGGGCAGCCAGCAGGCGGTGAACGTCGCCTCCGGGGCGACCTTCGGCGGCAGCAATGGTACGACCGTT AACGGTAAGGTGACCAACGAAGGGACGCTGGTCTTCGGCAACAGCGAGGAAACAGGCGCTATCTTCACCCTCAATGGCGA TCTGATCAACATGGGGACAATGACCAGTGGTAGCAGCTCCAGCACGCCTGGCAATACGCTTTATGTCGATGGCAATTACA CCGGCAACGGCGGCTCGCTTTACCTGAATACCGTCCTGGGCGACGATGATTCGGCAACCGATAAGTTGGTCATTACCGGC GATGCTTCCGGCACCACCGATCTGTACATCAACGGCATCGGCGATGGAGCACAGACCACTAACGGTATCGAAGTGGTGGA TGTTGGCGGCGTATCGACCAGCGATGCGTTTGAGCTAAAAAATGAGGTTAACGCCGGTCTGTATACCTACCGTCTGTACT GGAATGAAAGTGACAACGACTGGTATCTGGCGTCAAAAGCACAGTCTGATGATGACGACAGCGGCGGTGATGACACGCCT TCGGATGGCGGTGACGATGGCGGTAATGTCACGCCTCCGGACGACGGCGGCGATGGCGGTAATGTCACGCCTCCGGACGA CGGCGGCGACGGCGGCGATGTCACGCCTCCGGACCACGGCGGCGATGTCGCACCGCAGTACCGTGCGGATATCGGCGCGT ACATGGGCAACCAGTGGATGGCGCGCAACCTGCAAATGCAGACCCTCTATGACCGCGAGGGCAGCCAGTATCGTAATGCC GATGGCAGCGTATGGGCGCGCTTCAAAGCGGGTAAAGCGGAATCCGAGGCTGTCAGCGGCAATATCGATATGGACAGCAA CTACTCCCAGTTCCAGTTAGGCGGCGACATTCTGGCCTGGGGTAACGGCCAGCAGAGCGTTACCGTTGGCGTCATGGCGA GCTACATCAACGCCGATACCGACAGCACCGGTAACCGTGGCGCAGACGGTAGCCAGTTCACCAGTAGCGGCAACGTAGAC GGCTACAACCTTGGCGTCTATGCCACCTGGTTTGCCGATGCCCAAACGCATAGCGGCGCGTATGTCGACAGCTGGTACCA ATATGGTTTCTACAACAACAGCGTAGAGAGCGGTGATGCGGGATCTGAATCTTATGATTCAACCGCTAACGCCGTCTCGC TGGAAACTGGTTATCGCTACGATATTGCGCTTAGCAACGGTAATACTGTCAGTCTGACGCCGCAGGCGCAGGTTGTCTGG CAGAATTACTCAGCGGATAGCGTGAAGGATAACTACGGCACCCGGATTGATGGTCAGGATGGCGACAGTTGGACAACGCG TCTGGGTCTGCGTGTTGACGGCAAGCTGTACAAAGGCAGCCGTACGGTTATCCAGCCGTTTGCTGAAGCTAACTGGCTGC ACACCAGCGATGATGTGTCGGTATCGTTTGATGATGCTACGGTGAAACAGGATCTTCCGGCTAACCGTGCGGAGCTGAAA GTGGGTCTGCAGGCAGATATCGATAAGCAGTGGAGCGTTCGCGCTCAGGTTGCCGGGCAGACTGGCAGCAATGACTTTGG CGATCTGAACGGTAGCCTCAATCTGCGCTATAACTGGTAA
Upstream 100 bases:
>100_bases AAGGCTATTTGCAGCCCAATCAAAATCCAGTTTGCTTCGTGAACGTTATTAAAGGGAAATTTAAAAATTGAACAGGACTT ACAGTATTGTCTGGAGCGCC
Downstream 100 bases:
>100_bases GTTAGACAAAACCGGGCGGGTGTTCCCTGCCCGTTTTGAGGCGAATGACAAACCGGTTGATCGTCAGATTATGGCTACAC CTTATCCGACGTGGCGCGTA
Product: AIDA autotransporter-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 2039; Mature: 2039
Protein sequence:
>2039_residues MRNMYVVASELARGHSKVKAQVCASETHSPNQKSEYGQIIKATRAALACAVAAALGFFSPLAMADNQVSYADAQPHVLDA STPPISYSGTDEGAALYVSGVATVGWQPTTVTGTGLVIETSGGGADDPDGGKYVSNAISLDHYAILELTDAKITTTGIYT QGISAADGSTLRLTDSTLTIDGNFGVMTLYTGSEATLDGTIVEAANSSSAQVQQGSTLNVLDGSTITLAQGQINVVAGNT ATDEGSTLNLSDSSVSSAGTMSTIQGTNKAALNLTNATITHTNASGAAVQANNATTLDITGGNITSAGTGVYILASDARI DGATINADGDGIFITSKRKLDGYEDLNALTVSDANVTSKTVALNIDGSTTINDPIELTNSTFTAPTAIKLGSKATIQAEK TMLTGNIVQTDASSSSLSLSQGSTLTGSVDAMFTTLSLDDTSQWNMTDPSTVGNLTNDGDITLGNASGSTGTLLTVDNTL TLQDGSQINATLDTANSAPIIKAANVTLDGTLNLSSTATFVAPETDEHFGSITLIDSQTAITTDFDSVTLDADTSAMPDY LTINAGVDANDNTNYELSTGLSWYAGANSARAAHGTFTVDAGSTFTVTSELDETTATSNWNGSKLTKQGDGTLILSNTGN DYGDTEIDGGILAAKDAAALGTGDVTIAESATLALSQGTLDNNVTGEGQIVKSGSDELIVTGDNNYSGGTTISGGTLTAD HADSLGSGDIDNSGVLKVGEGELENILSGSGSLVKTGTGELTLSGDNTYSGGTTITGGTLTADHADSLGSGDIDNSGVLK VGEGDLENTLSGSGSLVKTGTGELTLSGGNDYSGGTTIIGGTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLV KTGTGELTLSGDNSYSGGTTIIGGTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGELTLSGDNSYSG GTTIIGGTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGELTLGGDNSYSGATTITDGTLIAANVNAL GSGNIDNSGTLILDANGAFELANVTTHSGATTALAAGSTLDAGQFTQEDGSTLSIDLGAATDDAVITADSVALGGTLNVT GIGSVTDSWTPEAYTYTLIGSDSAITTDFDDLTVAGMNREDVDFLTIDGKVDEADNTHYDLTASLSWYADRDNATTDAHG TFTLSDPDGSFNVAATLTDVDDTLDPGSRWDGKSLTKEGAGTLILSGDNDYSGGTTINEGTLVAASTTALGTGLVDNNAT LVLDADGEVSAVGGITTHSGATTQLALGTSLDLGDSALIQQDGSTLNVELNSDSVQPLITGSSATLGGDLVVSDASLQAR ASDAEFQSFKLMDMTSDISGDFTSLTMNLTDKPDYLTVTGTINPEDASEYLLTEGLSWNATATSATPAHGTFTLGAGDSF EVTSVLGDKTGNGDWDGKSLTKLGAGKLTLSGANTYSGDTNVQEGTLWLSGDGSIGEMGSQQAVNVASGATFGGSNGTTV NGKVTNEGTLVFGNSEETGAIFTLNGDLINMGTMTSGSSSSTPGNTLYVDGNYTGNGGSLYLNTVLGDDDSATDKLVITG DASGTTDLYINGIGDGAQTTNGIEVVDVGGVSTSDAFELKNEVNAGLYTYRLYWNESDNDWYLASKAQSDDDDSGGDDTP SDGGDDGGNVTPPDDGGDGGNVTPPDDGGDGGDVTPPDHGGDVAPQYRADIGAYMGNQWMARNLQMQTLYDREGSQYRNA DGSVWARFKAGKAESEAVSGNIDMDSNYSQFQLGGDILAWGNGQQSVTVGVMASYINADTDSTGNRGADGSQFTSSGNVD GYNLGVYATWFADAQTHSGAYVDSWYQYGFYNNSVESGDAGSESYDSTANAVSLETGYRYDIALSNGNTVSLTPQAQVVW QNYSADSVKDNYGTRIDGQDGDSWTTRLGLRVDGKLYKGSRTVIQPFAEANWLHTSDDVSVSFDDATVKQDLPANRAELK VGLQADIDKQWSVRAQVAGQTGSNDFGDLNGSLNLRYNW
Sequences:
>Translated_2039_residues MRNMYVVASELARGHSKVKAQVCASETHSPNQKSEYGQIIKATRAALACAVAAALGFFSPLAMADNQVSYADAQPHVLDA STPPISYSGTDEGAALYVSGVATVGWQPTTVTGTGLVIETSGGGADDPDGGKYVSNAISLDHYAILELTDAKITTTGIYT QGISAADGSTLRLTDSTLTIDGNFGVMTLYTGSEATLDGTIVEAANSSSAQVQQGSTLNVLDGSTITLAQGQINVVAGNT ATDEGSTLNLSDSSVSSAGTMSTIQGTNKAALNLTNATITHTNASGAAVQANNATTLDITGGNITSAGTGVYILASDARI DGATINADGDGIFITSKRKLDGYEDLNALTVSDANVTSKTVALNIDGSTTINDPIELTNSTFTAPTAIKLGSKATIQAEK TMLTGNIVQTDASSSSLSLSQGSTLTGSVDAMFTTLSLDDTSQWNMTDPSTVGNLTNDGDITLGNASGSTGTLLTVDNTL TLQDGSQINATLDTANSAPIIKAANVTLDGTLNLSSTATFVAPETDEHFGSITLIDSQTAITTDFDSVTLDADTSAMPDY LTINAGVDANDNTNYELSTGLSWYAGANSARAAHGTFTVDAGSTFTVTSELDETTATSNWNGSKLTKQGDGTLILSNTGN DYGDTEIDGGILAAKDAAALGTGDVTIAESATLALSQGTLDNNVTGEGQIVKSGSDELIVTGDNNYSGGTTISGGTLTAD HADSLGSGDIDNSGVLKVGEGELENILSGSGSLVKTGTGELTLSGDNTYSGGTTITGGTLTADHADSLGSGDIDNSGVLK VGEGDLENTLSGSGSLVKTGTGELTLSGGNDYSGGTTIIGGTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLV KTGTGELTLSGDNSYSGGTTIIGGTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGELTLSGDNSYSG GTTIIGGTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGELTLGGDNSYSGATTITDGTLIAANVNAL GSGNIDNSGTLILDANGAFELANVTTHSGATTALAAGSTLDAGQFTQEDGSTLSIDLGAATDDAVITADSVALGGTLNVT GIGSVTDSWTPEAYTYTLIGSDSAITTDFDDLTVAGMNREDVDFLTIDGKVDEADNTHYDLTASLSWYADRDNATTDAHG TFTLSDPDGSFNVAATLTDVDDTLDPGSRWDGKSLTKEGAGTLILSGDNDYSGGTTINEGTLVAASTTALGTGLVDNNAT LVLDADGEVSAVGGITTHSGATTQLALGTSLDLGDSALIQQDGSTLNVELNSDSVQPLITGSSATLGGDLVVSDASLQAR ASDAEFQSFKLMDMTSDISGDFTSLTMNLTDKPDYLTVTGTINPEDASEYLLTEGLSWNATATSATPAHGTFTLGAGDSF EVTSVLGDKTGNGDWDGKSLTKLGAGKLTLSGANTYSGDTNVQEGTLWLSGDGSIGEMGSQQAVNVASGATFGGSNGTTV NGKVTNEGTLVFGNSEETGAIFTLNGDLINMGTMTSGSSSSTPGNTLYVDGNYTGNGGSLYLNTVLGDDDSATDKLVITG DASGTTDLYINGIGDGAQTTNGIEVVDVGGVSTSDAFELKNEVNAGLYTYRLYWNESDNDWYLASKAQSDDDDSGGDDTP SDGGDDGGNVTPPDDGGDGGNVTPPDDGGDGGDVTPPDHGGDVAPQYRADIGAYMGNQWMARNLQMQTLYDREGSQYRNA DGSVWARFKAGKAESEAVSGNIDMDSNYSQFQLGGDILAWGNGQQSVTVGVMASYINADTDSTGNRGADGSQFTSSGNVD GYNLGVYATWFADAQTHSGAYVDSWYQYGFYNNSVESGDAGSESYDSTANAVSLETGYRYDIALSNGNTVSLTPQAQVVW QNYSADSVKDNYGTRIDGQDGDSWTTRLGLRVDGKLYKGSRTVIQPFAEANWLHTSDDVSVSFDDATVKQDLPANRAELK VGLQADIDKQWSVRAQVAGQTGSNDFGDLNGSLNLRYNW >Mature_2039_residues MRNMYVVASELARGHSKVKAQVCASETHSPNQKSEYGQIIKATRAALACAVAAALGFFSPLAMADNQVSYADAQPHVLDA STPPISYSGTDEGAALYVSGVATVGWQPTTVTGTGLVIETSGGGADDPDGGKYVSNAISLDHYAILELTDAKITTTGIYT QGISAADGSTLRLTDSTLTIDGNFGVMTLYTGSEATLDGTIVEAANSSSAQVQQGSTLNVLDGSTITLAQGQINVVAGNT ATDEGSTLNLSDSSVSSAGTMSTIQGTNKAALNLTNATITHTNASGAAVQANNATTLDITGGNITSAGTGVYILASDARI DGATINADGDGIFITSKRKLDGYEDLNALTVSDANVTSKTVALNIDGSTTINDPIELTNSTFTAPTAIKLGSKATIQAEK TMLTGNIVQTDASSSSLSLSQGSTLTGSVDAMFTTLSLDDTSQWNMTDPSTVGNLTNDGDITLGNASGSTGTLLTVDNTL TLQDGSQINATLDTANSAPIIKAANVTLDGTLNLSSTATFVAPETDEHFGSITLIDSQTAITTDFDSVTLDADTSAMPDY LTINAGVDANDNTNYELSTGLSWYAGANSARAAHGTFTVDAGSTFTVTSELDETTATSNWNGSKLTKQGDGTLILSNTGN DYGDTEIDGGILAAKDAAALGTGDVTIAESATLALSQGTLDNNVTGEGQIVKSGSDELIVTGDNNYSGGTTISGGTLTAD HADSLGSGDIDNSGVLKVGEGELENILSGSGSLVKTGTGELTLSGDNTYSGGTTITGGTLTADHADSLGSGDIDNSGVLK VGEGDLENTLSGSGSLVKTGTGELTLSGGNDYSGGTTIIGGTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLV KTGTGELTLSGDNSYSGGTTIIGGTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGELTLSGDNSYSG GTTIIGGTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGELTLGGDNSYSGATTITDGTLIAANVNAL GSGNIDNSGTLILDANGAFELANVTTHSGATTALAAGSTLDAGQFTQEDGSTLSIDLGAATDDAVITADSVALGGTLNVT GIGSVTDSWTPEAYTYTLIGSDSAITTDFDDLTVAGMNREDVDFLTIDGKVDEADNTHYDLTASLSWYADRDNATTDAHG TFTLSDPDGSFNVAATLTDVDDTLDPGSRWDGKSLTKEGAGTLILSGDNDYSGGTTINEGTLVAASTTALGTGLVDNNAT LVLDADGEVSAVGGITTHSGATTQLALGTSLDLGDSALIQQDGSTLNVELNSDSVQPLITGSSATLGGDLVVSDASLQAR ASDAEFQSFKLMDMTSDISGDFTSLTMNLTDKPDYLTVTGTINPEDASEYLLTEGLSWNATATSATPAHGTFTLGAGDSF EVTSVLGDKTGNGDWDGKSLTKLGAGKLTLSGANTYSGDTNVQEGTLWLSGDGSIGEMGSQQAVNVASGATFGGSNGTTV NGKVTNEGTLVFGNSEETGAIFTLNGDLINMGTMTSGSSSSTPGNTLYVDGNYTGNGGSLYLNTVLGDDDSATDKLVITG DASGTTDLYINGIGDGAQTTNGIEVVDVGGVSTSDAFELKNEVNAGLYTYRLYWNESDNDWYLASKAQSDDDDSGGDDTP SDGGDDGGNVTPPDDGGDGGNVTPPDDGGDGGDVTPPDHGGDVAPQYRADIGAYMGNQWMARNLQMQTLYDREGSQYRNA DGSVWARFKAGKAESEAVSGNIDMDSNYSQFQLGGDILAWGNGQQSVTVGVMASYINADTDSTGNRGADGSQFTSSGNVD GYNLGVYATWFADAQTHSGAYVDSWYQYGFYNNSVESGDAGSESYDSTANAVSLETGYRYDIALSNGNTVSLTPQAQVVW QNYSADSVKDNYGTRIDGQDGDSWTTRLGLRVDGKLYKGSRTVIQPFAEANWLHTSDDVSVSFDDATVKQDLPANRAELK VGLQADIDKQWSVRAQVAGQTGSNDFGDLNGSLNLRYNW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]
Homologues:
Organism=Escherichia coli, GI1788565, Length=317, Percent_Identity=28.0757097791798, Blast_Score=124, Evalue=6e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005546 - InterPro: IPR013425 - InterPro: IPR006315 - InterPro: IPR012332 - InterPro: IPR011050 - InterPro: IPR004899 [H]
Pfam domain/function: PF03797 Autotransporter; PF03212 Pertactin [H]
EC number: NA
Molecular weight: Translated: 207129; Mature: 207129
Theoretical pI: Translated: 3.68; Mature: 3.68
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNMYVVASELARGHSKVKAQVCASETHSPNQKSEYGQIIKATRAALACAVAAALGFFSP CCCEEEEHHHHHCCHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCH LAMADNQVSYADAQPHVLDASTPPISYSGTDEGAALYVSGVATVGWQPTTVTGTGLVIET HHHCCCCEEECCCCCEEEECCCCCEEECCCCCCCEEEEEEEEECCCCCCEEECCEEEEEC SGGGADDPDGGKYVSNAISLDHYAILELTDAKITTTGIYTQGISAADGSTLRLTDSTLTI CCCCCCCCCCCHHHHHEECCCEEEEEEEECCEEEEEEEEECCCCCCCCCEEEEECCEEEE DGNFGVMTLYTGSEATLDGTIVEAANSSSAQVQQGSTLNVLDGSTITLAQGQINVVAGNT ECCCCEEEEEECCCCEECCEEEEECCCCCCEEECCCEEEEECCCEEEEECCEEEEEECCC ATDEGSTLNLSDSSVSSAGTMSTIQGTNKAALNLTNATITHTNASGAAVQANNATTLDIT CCCCCCEEEECCCCCCCCCCEEEECCCCCEEEEEECEEEEEECCCCCEEECCCCEEEEEE GGNITSAGTGVYILASDARIDGATINADGDGIFITSKRKLDGYEDLNALTVSDANVTSKT CCCCCCCCCEEEEEEECCEECCEEEECCCCEEEEEECCCCCCCCCCCEEEEECCCCCEEE VALNIDGSTTINDPIELTNSTFTAPTAIKLGSKATIQAEKTMLTGNIVQTDASSSSLSLS EEEECCCCCCCCCCCEECCCEECCCEEEECCCCEEEEEEEEEEECCEEEECCCCCEEEEC QGSTLTGSVDAMFTTLSLDDTSQWNMTDPSTVGNLTNDGDITLGNASGSTGTLLTVDNTL CCCEEECCCEEEEEEEECCCCCCCCCCCCHHHCCCCCCCCEEEECCCCCCCEEEEECCEE TLQDGSQINATLDTANSAPIIKAANVTLDGTLNLSSTATFVAPETDEHFGSITLIDSQTA EECCCCEEEEEEECCCCCCEEEEEEEEEEEEEECCCCEEEEECCCCCCCCEEEEEECCCE ITTDFDSVTLDADTSAMPDYLTINAGVDANDNTNYELSTGLSWYAGANSARAAHGTFTVD EEECCCCEEECCCCCCCCCEEEEECCCCCCCCCCEEEECCEEEECCCCCCCCCCCEEEEE AGSTFTVTSELDETTATSNWNGSKLTKQGDGTLILSNTGNDYGDTEIDGGILAAKDAAAL CCCEEEEECCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCC GTGDVTIAESATLALSQGTLDNNVTGEGQIVKSGSDELIVTGDNNYSGGTTISGGTLTAD CCCCEEEECCEEEEEECCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCEEECCCEEECC HADSLGSGDIDNSGVLKVGEGELENILSGSGSLVKTGTGELTLSGDNTYSGGTTITGGTL CCCCCCCCCCCCCCEEEECCCHHHHHHCCCCCEEEECCCEEEECCCCCCCCCCEEECCEE TADHADSLGSGDIDNSGVLKVGEGDLENTLSGSGSLVKTGTGELTLSGGNDYSGGTTIIG ECCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCCEEEECCCEEEEECCCCCCCCEEEEE GTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGELTLSGDNSYSGGTT CEEECCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCCEEEECCCEEEECCCCCCCCCCE IIGGTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGELTLSGDNSYSG EEECEEECCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCCEEEECCCEEEECCCCCCCC GTTIIGGTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGELTLGGDNS CCEEEECEEECCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCCEEEECCCEEEECCCCC YSGATTITDGTLIAANVNALGSGNIDNSGTLILDANGAFELANVTTHSGATTALAAGSTL CCCCEEEECCEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCEEEEECCCCC DAGQFTQEDGSTLSIDLGAATDDAVITADSVALGGTLNVTGIGSVTDSWTPEAYTYTLIG CCCCCCCCCCCEEEEEECCCCCCCEEEECCEEECCEEEEEECCCCCCCCCCCEEEEEEEE SDSAITTDFDDLTVAGMNREDVDFLTIDGKVDEADNTHYDLTASLSWYADRDNATTDAHG CCCEEEECCCCEEEECCCCCCCEEEEECCEECCCCCCEEEEEEEEEEEECCCCCCCCCCE TFTLSDPDGSFNVAATLTDVDDTLDPGSRWDGKSLTKEGAGTLILSGDNDYSGGTTINEG EEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEECCC TLVAASTTALGTGLVDNNATLVLDADGEVSAVGGITTHSGATTQLALGTSLDLGDSALIQ EEEEEECCCEECCEECCCCEEEEECCCCEEEECCEEECCCCCEEEEECCCCCCCCCEEEE QDGSTLNVELNSDSVQPLITGSSATLGGDLVVSDASLQARASDAEFQSFKLMDMTSDISG CCCCEEEEEECCCCCCEEEECCCCCCCCEEEEECCCCEEECCCCCCCEEEEEEECCCCCC DFTSLTMNLTDKPDYLTVTGTINPEDASEYLLTEGLSWNATATSATPAHGTFTLGAGDSF CEEEEEEEECCCCCEEEEEEECCCCCCCHHHHHCCCCCCCEECCCCCCCCEEEECCCCCE EVTSVLGDKTGNGDWDGKSLTKLGAGKLTLSGANTYSGDTNVQEGTLWLSGDGSIGEMGS EEEEEECCCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCC QQAVNVASGATFGGSNGTTVNGKVTNEGTLVFGNSEETGAIFTLNGDLINMGTMTSGSSS CCEEEEECCCEECCCCCCEEEEEEECCCEEEECCCCCCCEEEEECCCEEEECEECCCCCC STPGNTLYVDGNYTGNGGSLYLNTVLGDDDSATDKLVITGDASGTTDLYINGIGDGAQTT CCCCCEEEECCCEECCCCEEEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCC NGIEVVDVGGVSTSDAFELKNEVNAGLYTYRLYWNESDNDWYLASKAQSDDDDSGGDDTP CCEEEEEECCCCCCHHHHHHHHCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCC SDGGDDGGNVTPPDDGGDGGNVTPPDDGGDGGDVTPPDHGGDVAPQYRADIGAYMGNQWM CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCH ARNLQMQTLYDREGSQYRNADGSVWARFKAGKAESEAVSGNIDMDSNYSQFQLGGDILAW HCCEEEEEEECCCCCCEECCCCCEEEEEECCCCCCCEEECCCCCCCCCCEEEECCCEEEE GNGQQSVTVGVMASYINADTDSTGNRGADGSQFTSSGNVDGYNLGVYATWFADAQTHSGA CCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCC YVDSWYQYGFYNNSVESGDAGSESYDSTANAVSLETGYRYDIALSNGNTVSLTPQAQVVW EEECCEECCEECCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCEEEECCCEEEEE QNYSADSVKDNYGTRIDGQDGDSWTTRLGLRVDGKLYKGSRTVIQPFAEANWLHTSDDVS ECCCCCCCCCCCCCEECCCCCCCEEEEEEEEECCEEEECCCCEEEHHHHCCCEECCCCCE VSFDDATVKQDLPANRAELKVGLQADIDKQWSVRAQVAGQTGSNDFGDLNGSLNLRYNW EEECCCHHHHCCCCCHHHEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure MRNMYVVASELARGHSKVKAQVCASETHSPNQKSEYGQIIKATRAALACAVAAALGFFSP CCCEEEEHHHHHCCHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCH LAMADNQVSYADAQPHVLDASTPPISYSGTDEGAALYVSGVATVGWQPTTVTGTGLVIET HHHCCCCEEECCCCCEEEECCCCCEEECCCCCCCEEEEEEEEECCCCCCEEECCEEEEEC SGGGADDPDGGKYVSNAISLDHYAILELTDAKITTTGIYTQGISAADGSTLRLTDSTLTI CCCCCCCCCCCHHHHHEECCCEEEEEEEECCEEEEEEEEECCCCCCCCCEEEEECCEEEE DGNFGVMTLYTGSEATLDGTIVEAANSSSAQVQQGSTLNVLDGSTITLAQGQINVVAGNT ECCCCEEEEEECCCCEECCEEEEECCCCCCEEECCCEEEEECCCEEEEECCEEEEEECCC ATDEGSTLNLSDSSVSSAGTMSTIQGTNKAALNLTNATITHTNASGAAVQANNATTLDIT CCCCCCEEEECCCCCCCCCCEEEECCCCCEEEEEECEEEEEECCCCCEEECCCCEEEEEE GGNITSAGTGVYILASDARIDGATINADGDGIFITSKRKLDGYEDLNALTVSDANVTSKT CCCCCCCCCEEEEEEECCEECCEEEECCCCEEEEEECCCCCCCCCCCEEEEECCCCCEEE VALNIDGSTTINDPIELTNSTFTAPTAIKLGSKATIQAEKTMLTGNIVQTDASSSSLSLS EEEECCCCCCCCCCCEECCCEECCCEEEECCCCEEEEEEEEEEECCEEEECCCCCEEEEC QGSTLTGSVDAMFTTLSLDDTSQWNMTDPSTVGNLTNDGDITLGNASGSTGTLLTVDNTL CCCEEECCCEEEEEEEECCCCCCCCCCCCHHHCCCCCCCCEEEECCCCCCCEEEEECCEE TLQDGSQINATLDTANSAPIIKAANVTLDGTLNLSSTATFVAPETDEHFGSITLIDSQTA EECCCCEEEEEEECCCCCCEEEEEEEEEEEEEECCCCEEEEECCCCCCCCEEEEEECCCE ITTDFDSVTLDADTSAMPDYLTINAGVDANDNTNYELSTGLSWYAGANSARAAHGTFTVD EEECCCCEEECCCCCCCCCEEEEECCCCCCCCCCEEEECCEEEECCCCCCCCCCCEEEEE AGSTFTVTSELDETTATSNWNGSKLTKQGDGTLILSNTGNDYGDTEIDGGILAAKDAAAL CCCEEEEECCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCC GTGDVTIAESATLALSQGTLDNNVTGEGQIVKSGSDELIVTGDNNYSGGTTISGGTLTAD CCCCEEEECCEEEEEECCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCEEECCCEEECC HADSLGSGDIDNSGVLKVGEGELENILSGSGSLVKTGTGELTLSGDNTYSGGTTITGGTL CCCCCCCCCCCCCCEEEECCCHHHHHHCCCCCEEEECCCEEEECCCCCCCCCCEEECCEE TADHADSLGSGDIDNSGVLKVGEGDLENTLSGSGSLVKTGTGELTLSGGNDYSGGTTIIG ECCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCCEEEECCCEEEEECCCCCCCCEEEEE GTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGELTLSGDNSYSGGTT CEEECCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCCEEEECCCEEEECCCCCCCCCCE IIGGTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGELTLSGDNSYSG EEECEEECCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCCEEEECCCEEEECCCCCCCC GTTIIGGTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGELTLGGDNS CCEEEECEEECCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCCEEEECCCEEEECCCCC YSGATTITDGTLIAANVNALGSGNIDNSGTLILDANGAFELANVTTHSGATTALAAGSTL CCCCEEEECCEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCEEEEECCCCC DAGQFTQEDGSTLSIDLGAATDDAVITADSVALGGTLNVTGIGSVTDSWTPEAYTYTLIG CCCCCCCCCCCEEEEEECCCCCCCEEEECCEEECCEEEEEECCCCCCCCCCCEEEEEEEE SDSAITTDFDDLTVAGMNREDVDFLTIDGKVDEADNTHYDLTASLSWYADRDNATTDAHG CCCEEEECCCCEEEECCCCCCCEEEEECCEECCCCCCEEEEEEEEEEEECCCCCCCCCCE TFTLSDPDGSFNVAATLTDVDDTLDPGSRWDGKSLTKEGAGTLILSGDNDYSGGTTINEG EEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEECCC TLVAASTTALGTGLVDNNATLVLDADGEVSAVGGITTHSGATTQLALGTSLDLGDSALIQ EEEEEECCCEECCEECCCCEEEEECCCCEEEECCEEECCCCCEEEEECCCCCCCCCEEEE QDGSTLNVELNSDSVQPLITGSSATLGGDLVVSDASLQARASDAEFQSFKLMDMTSDISG CCCCEEEEEECCCCCCEEEECCCCCCCCEEEEECCCCEEECCCCCCCEEEEEEECCCCCC DFTSLTMNLTDKPDYLTVTGTINPEDASEYLLTEGLSWNATATSATPAHGTFTLGAGDSF CEEEEEEEECCCCCEEEEEEECCCCCCCHHHHHCCCCCCCEECCCCCCCCEEEECCCCCE EVTSVLGDKTGNGDWDGKSLTKLGAGKLTLSGANTYSGDTNVQEGTLWLSGDGSIGEMGS EEEEEECCCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCC QQAVNVASGATFGGSNGTTVNGKVTNEGTLVFGNSEETGAIFTLNGDLINMGTMTSGSSS CCEEEEECCCEECCCCCCEEEEEEECCCEEEECCCCCCCEEEEECCCEEEECEECCCCCC STPGNTLYVDGNYTGNGGSLYLNTVLGDDDSATDKLVITGDASGTTDLYINGIGDGAQTT CCCCCEEEECCCEECCCCEEEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCC NGIEVVDVGGVSTSDAFELKNEVNAGLYTYRLYWNESDNDWYLASKAQSDDDDSGGDDTP CCEEEEEECCCCCCHHHHHHHHCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCC SDGGDDGGNVTPPDDGGDGGNVTPPDDGGDGGDVTPPDHGGDVAPQYRADIGAYMGNQWM CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCH ARNLQMQTLYDREGSQYRNADGSVWARFKAGKAESEAVSGNIDMDSNYSQFQLGGDILAW HCCEEEEEEECCCCCCEECCCCCEEEEEECCCCCCCEEECCCCCCCCCCEEEECCCEEEE GNGQQSVTVGVMASYINADTDSTGNRGADGSQFTSSGNVDGYNLGVYATWFADAQTHSGA CCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCC YVDSWYQYGFYNNSVESGDAGSESYDSTANAVSLETGYRYDIALSNGNTVSLTPQAQVVW EEECCEECCEECCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCEEEECCCEEEEE QNYSADSVKDNYGTRIDGQDGDSWTTRLGLRVDGKLYKGSRTVIQPFAEANWLHTSDDVS ECCCCCCCCCCCCCEECCCCCCCEEEEEEEEECCEEEECCCCEEEHHHHCCCEECCCCCE VSFDDATVKQDLPANRAELKVGLQADIDKQWSVRAQVAGQTGSNDFGDLNGSLNLRYNW EEECCCHHHHCCCCCHHHEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA