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The map label for this gene is yeiE [H]

Identifier: 16765531

GI number: 16765531

Start: 2300547

End: 2301410

Strand: Reverse

Name: yeiE [H]

Synonym: STM2201

Alternate gene names: 16765531

Gene position: 2301410-2300547 (Counterclockwise)

Preceding gene: 16765534

Following gene: 16765530

Centisome position: 47.38

GC content: 54.63

Gene sequence:

>864_bases
ATGCATATTACGCTACGACAACTTGAAGTGTTTGCTGAAGTACTGAAAAGCGGTTCAACAACCCAGGCGTCGGTCATGCT
GTCATTATCGCAGTCCGCCGTTAGCGCCGCGCTCACCGATCTGGAAGGTCAGCTCGGCGTACAGTTGTTTGATCGGGTGG
GGAAACGGCTGGTGGTCAACGAACATGGGCGCTTGTTATACCCGCGCGCGCTGGCATTGCTGGAGCAAGCGATAGAAATT
GAGCAGCTATTTCGTGAAGATAACGGCGCGATACGGGTTTATGCCAGTAGCACCATCGGCAATTACATTTTACCCGCTAT
GATTGCCCGCTATCGCCAGCATTATCCGGCCTTGCCGCTGGAACTCAGCGTGGGAAACAGCCAGGACGTGATTAACGCGG
TGCTGGATTTTCGGGTTGATATCGGCCTGATTGAAGGACCATGTCACAGTACAGAGATTATCTCTGAGCCGTGGCTGGAA
GATGAGCTGGTGGTCTTTGCCGCGCCGTCCTCGCCGCTGACGCAGGGGCCGGTGACGCTGGAACAGCTTGCGGCATCCCC
ATGGATTTTACGCGAGCGCGGTTCCGGTACGCGGGAAATTGTCGATTATTTGCTGTTGTCGCATTTGCCGCGCTTTCATA
TGGCGATGGAGTTGGGGAATTCAGAAGCGATCAAACATGCGGTGCGTCATGGACTGGGGATAAGTTGTTTATCGCGCCGG
GTGATTGCTGAACAACTCCAGGCGGGAACCCTGGGCGAAGTCGCGGTGCCGTTACCGCGCCTGGTGCGCACGTTGTGGCG
TGTTCATCATCGGCAGAAACATCTTTCTAACGCGTTGCAGCGTTTTTTGAGTTACTGTGAATAA

Upstream 100 bases:

>100_bases
CAATAAGGTTACGGTGATCTGGTTTAAAAATAAAATTGATTATATATTTATAATTAATCTTTATAAGTGGTAAGTGAAAC
GCTATCGGTGGGATACGACT

Downstream 100 bases:

>100_bases
AGGTGAAGAGGAGGGCTGCCCGGGCGGCATCGCCATTTTTAGTATCCGCTTACGTATACGTTATTCTCTGCTTTACTTAT
AATCCGTGGCCGGTCATGAA

Product: DNA-binding transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MHITLRQLEVFAEVLKSGSTTQASVMLSLSQSAVSAALTDLEGQLGVQLFDRVGKRLVVNEHGRLLYPRALALLEQAIEI
EQLFREDNGAIRVYASSTIGNYILPAMIARYRQHYPALPLELSVGNSQDVINAVLDFRVDIGLIEGPCHSTEIISEPWLE
DELVVFAAPSSPLTQGPVTLEQLAASPWILRERGSGTREIVDYLLLSHLPRFHMAMELGNSEAIKHAVRHGLGISCLSRR
VIAEQLQAGTLGEVAVPLPRLVRTLWRVHHRQKHLSNALQRFLSYCE

Sequences:

>Translated_287_residues
MHITLRQLEVFAEVLKSGSTTQASVMLSLSQSAVSAALTDLEGQLGVQLFDRVGKRLVVNEHGRLLYPRALALLEQAIEI
EQLFREDNGAIRVYASSTIGNYILPAMIARYRQHYPALPLELSVGNSQDVINAVLDFRVDIGLIEGPCHSTEIISEPWLE
DELVVFAAPSSPLTQGPVTLEQLAASPWILRERGSGTREIVDYLLLSHLPRFHMAMELGNSEAIKHAVRHGLGISCLSRR
VIAEQLQAGTLGEVAVPLPRLVRTLWRVHHRQKHLSNALQRFLSYCE
>Mature_287_residues
MHITLRQLEVFAEVLKSGSTTQASVMLSLSQSAVSAALTDLEGQLGVQLFDRVGKRLVVNEHGRLLYPRALALLEQAIEI
EQLFREDNGAIRVYASSTIGNYILPAMIARYRQHYPALPLELSVGNSQDVINAVLDFRVDIGLIEGPCHSTEIISEPWLE
DELVVFAAPSSPLTQGPVTLEQLAASPWILRERGSGTREIVDYLLLSHLPRFHMAMELGNSEAIKHAVRHGLGISCLSRR
VIAEQLQAGTLGEVAVPLPRLVRTLWRVHHRQKHLSNALQRFLSYCE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=287, Percent_Identity=91.2891986062718, Blast_Score=541, Evalue=1e-155,
Organism=Escherichia coli, GI87082132, Length=291, Percent_Identity=26.8041237113402, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1788296, Length=244, Percent_Identity=29.0983606557377, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1788748, Length=283, Percent_Identity=27.9151943462898, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1787601, Length=198, Percent_Identity=28.2828282828283, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1786401, Length=304, Percent_Identity=25, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI157672245, Length=206, Percent_Identity=29.6116504854369, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787806, Length=180, Percent_Identity=30.5555555555556, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI145693105, Length=291, Percent_Identity=23.3676975945017, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1789506, Length=200, Percent_Identity=28, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1789639, Length=146, Percent_Identity=30.8219178082192, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1787879, Length=301, Percent_Identity=24.9169435215947, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789204, Length=279, Percent_Identity=26.5232974910394, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787530, Length=246, Percent_Identity=25.2032520325203, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI87081904, Length=213, Percent_Identity=27.6995305164319, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 31905; Mature: 31905

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHITLRQLEVFAEVLKSGSTTQASVMLSLSQSAVSAALTDLEGQLGVQLFDRVGKRLVVN
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEC
EHGRLLYPRALALLEQAIEIEQLFREDNGAIRVYASSTIGNYILPAMIARYRQHYPALPL
CCCCEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCE
ELSVGNSQDVINAVLDFRVDIGLIEGPCHSTEIISEPWLEDELVVFAAPSSPLTQGPVTL
EEECCCCHHHHHHHHHHHHHEEEECCCCCCCHHHCCCCCCCCEEEEECCCCCCCCCCCHH
EQLAASPWILRERGSGTREIVDYLLLSHLPRFHMAMELGNSEAIKHAVRHGLGISCLSRR
HHHHCCCCEEECCCCCHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCCHHHHHHH
VIAEQLQAGTLGEVAVPLPRLVRTLWRVHHRQKHLSNALQRFLSYCE
HHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHITLRQLEVFAEVLKSGSTTQASVMLSLSQSAVSAALTDLEGQLGVQLFDRVGKRLVVN
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEC
EHGRLLYPRALALLEQAIEIEQLFREDNGAIRVYASSTIGNYILPAMIARYRQHYPALPL
CCCCEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCE
ELSVGNSQDVINAVLDFRVDIGLIEGPCHSTEIISEPWLEDELVVFAAPSSPLTQGPVTL
EEECCCCHHHHHHHHHHHHHEEEECCCCCCCHHHCCCCCCCCEEEEECCCCCCCCCCCHH
EQLAASPWILRERGSGTREIVDYLLLSHLPRFHMAMELGNSEAIKHAVRHGLGISCLSRR
HHHHCCCCEEECCCCCHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCCHHHHHHH
VIAEQLQAGTLGEVAVPLPRLVRTLWRVHHRQKHLSNALQRFLSYCE
HHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]