Click here to switch to the map view.

The map label for this gene is sanA [H]

Identifier: 16765514

GI number: 16765514

Start: 2280227

End: 2280946

Strand: Direct

Name: sanA [H]

Synonym: STM2184

Alternate gene names: 16765514

Gene position: 2280227-2280946 (Clockwise)

Preceding gene: 16765513

Following gene: 16765515

Centisome position: 46.94

GC content: 51.94

Gene sequence:

>720_bases
ATGTTAAAGCGCGTGTTTTACAGCCTGTTGGTCCTGGTAGGCTTGCTGCTGTTGACGGTGCTTGGCCTCGATCGGTGGAT
GAGCTGGAAAACAGCGCCCTATATCTATGACGAGCTACAGGATCTCCCCTACCGCCAGGTTGGCGTCGTGTTAGGGACAG
CCAAATACTATCGCAAGGGTGTCATTAATCAGTACTATCGTTATCGTATCCAGGGCGCGTTAAACGCTTACAATAGCGGT
AAAGTCAATTACCTGCTGCTCAGCGGCGACAATGCCCTGCAAAGCTATAACGAACCGATGACCATGCGCAAAGACCTTAT
CGCGGCGGGCGTCGATCCTGCGGACATTGTGCTTGATTACGCTGGCTTCCGTACGCTTGACTCCATTGTGCGTACCCGCA
AAGTGTTTGATACCAACGACTTTATTATCATCACTCAGCGCTTCCACTGCGAACGCGCCTTGTTTATTGCGTTGCATATG
GGCATTCAGGCGCAGTGTTACGCGGTACCTTCACCCAAAAATATGCTGACAGTGCGCCTGCGCGAATTTGGCGCCCGCTT
TAGTGCGCTGGCGGATCTCTATATTTTTAAACGCGAACCGCGTTTTTTAGGCCCGCTGGTACCTATTCCCACGCAGCATC
AGGTGCCGAATGACGCCCAGGGGTATCCGGCCGTTACGCCGGAACAATTGCTTGAACTGGAAAAGAAAAAAGGGAAATGA

Upstream 100 bases:

>100_bases
ATCATGCTGAAAATCTCCGCAATCAGACGGCGGTTTCTTGCGCTACGTCTTCGGGTACAGTAGCCTGATCGTACTTTCAT
CCTGGTATCGAGTTTCCTGC

Downstream 100 bases:

>100_bases
TCATGGATGTACAGACGATATTTGTCATATTAGCCTTTCTGCTACTCCCGCTTTTTTGCTTCCGTGAGGCCTGGAAAGGC
TGGCGAACCGGCGCGGTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MLKRVFYSLLVLVGLLLLTVLGLDRWMSWKTAPYIYDELQDLPYRQVGVVLGTAKYYRKGVINQYYRYRIQGALNAYNSG
KVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFDTNDFIIITQRFHCERALFIALHM
GIQAQCYAVPSPKNMLTVRLREFGARFSALADLYIFKREPRFLGPLVPIPTQHQVPNDAQGYPAVTPEQLLELEKKKGK

Sequences:

>Translated_239_residues
MLKRVFYSLLVLVGLLLLTVLGLDRWMSWKTAPYIYDELQDLPYRQVGVVLGTAKYYRKGVINQYYRYRIQGALNAYNSG
KVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFDTNDFIIITQRFHCERALFIALHM
GIQAQCYAVPSPKNMLTVRLREFGARFSALADLYIFKREPRFLGPLVPIPTQHQVPNDAQGYPAVTPEQLLELEKKKGK
>Mature_239_residues
MLKRVFYSLLVLVGLLLLTVLGLDRWMSWKTAPYIYDELQDLPYRQVGVVLGTAKYYRKGVINQYYRYRIQGALNAYNSG
KVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFDTNDFIIITQRFHCERALFIALHM
GIQAQCYAVPSPKNMLTVRLREFGARFSALADLYIFKREPRFLGPLVPIPTQHQVPNDAQGYPAVTPEQLLELEKKKGK

Specific function: Participates in the barrier function of the cell envelope [H]

COG id: COG2949

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788466, Length=239, Percent_Identity=93.7238493723849, Blast_Score=435, Evalue=1e-123,
Organism=Escherichia coli, GI1789468, Length=226, Percent_Identity=40.2654867256637, Blast_Score=142, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 27376; Mature: 27376

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRVFYSLLVLVGLLLLTVLGLDRWMSWKTAPYIYDELQDLPYRQVGVVLGTAKYYRKG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH
VINQYYRYRIQGALNAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPADIVLDY
HHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHCCCCHHHHHHHHHCCCCHHHHHHHH
AGFRTLDSIVRTRKVFDTNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKNMLTVRL
HHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHH
REFGARFSALADLYIFKREPRFLGPLVPIPTQHQVPNDAQGYPAVTPEQLLELEKKKGK
HHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MLKRVFYSLLVLVGLLLLTVLGLDRWMSWKTAPYIYDELQDLPYRQVGVVLGTAKYYRKG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH
VINQYYRYRIQGALNAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPADIVLDY
HHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHCCCCHHHHHHHHHCCCCHHHHHHHH
AGFRTLDSIVRTRKVFDTNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKNMLTVRL
HHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHH
REFGARFSALADLYIFKREPRFLGPLVPIPTQHQVPNDAQGYPAVTPEQLLELEKKKGK
HHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]