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The map label for this gene is yegD [H]

Identifier: 16765455

GI number: 16765455

Start: 2212491

End: 2213843

Strand: Direct

Name: yegD [H]

Synonym: STM2125

Alternate gene names: 16765455

Gene position: 2212491-2213843 (Clockwise)

Preceding gene: 16765453

Following gene: 16765456

Centisome position: 45.55

GC content: 59.72

Gene sequence:

>1353_bases
GTGTTTATCGGATTTGATTACGGTACGGCAAACTGCTCGGTCGCCATTATGCGCGACGGGCATCCACAGTTGCTGACAAT
GGAGAATAACAGCGCATTACTGCCGTCTATGCTGTGCGCGCCGACGCGCGAAGCGGTGAGCGAGTGGCTGTATCGCCATC
ATGATGTGCCGGCAACGGACGAAGAAACCCAGGCGCTGCTACGCCGCGCGATACGCTACAACCGCGAGGAAGATATTGAG
GTTGGCGCGCAAAGCGTACAGTTTGGTCTGGCGTCGCTGGCGCACTATATTGACGATCCCCAGGAGGTCTGGTTTGTCAA
ATCGCCGAAATCCTTTTTAGGCGCCAGCGGCCTGAAACCGCAGCAGGTCGCGCTGTTTGAAGATTTAGTCTGCGCCATGA
TGGTACATATTCGTCATACGGCGCACAGCCAATTGCCGGAGGCCATTACCCAGGCAGTGATCGGTCGCCCGATCAACTTT
CAGGGACTGGGCGGCGATGACGCGAACCGCCAGGCGCAGGGTATTCTGGAGCGGGCGGCAAAACGCGCCGGTTTTCAGGA
GGTGGTATTCCAGTACGAACCGGTTGCGGCGGGCCTGGACTACGAGGCTACGCTGCGGGAAGAGAAGCGTGTGCTGGTCG
TGGATATTGGCGGCGGCACCACCGACTGCTCCATGCTGCTGATGGGGCCGCAGTGGCGTCAGCGCGCCGATCGTGAAAAC
AGCCTGTTGGGGCACAGCGGTTGCCGCGTGGGCGGAAACGATCTGGATATCGCGCTGGCCTTTAAAAATCTGATGCCTTT
GCTGGGCATGGGCGGCGAAACCGAAAAAGGTATCGCCCTGCCGGTGCTGCCGTGGTGGAACGCCGTCGCGATTAACGACG
TCCCGGCGCAAAGCGATTTTTACAGTAGCGCGAATGGTCGTCTGTTGAACGATTTGGTTCGCAACGCGCGTGAAGCAGAC
AAGGTCGCGTTGCTGCTCAAGGTCTGGCGTCAGCGGCTTAGCTACCGCCTGGTACGCTGCGCGGAAGAGAGCAAAATCGC
CCTTTCCGGCCAGGCGGATGTTACGGCGAGGCTGCCATTTATCAGCGACGACCTGGCGGTCGCTATCAGCCAGCAAGGAC
TGGAAGCGGCGCTGGATCAACCGCTGACGCGCATTCTGGAACAGGTGCAACTGGCGCTGGACAGCGCGCAGGAAAAACCG
GATGTCATCTATCTGACCGGCGGCAGCGCCCGTTCGCCATTGATTAAAAAAGCGCTTTCCGAACAGTTACCGGGCATACC
CGTCGCTGGCGGCGATGATTTCGGCTCCGTCACCGCAGGACTGGCGCGCTGGGCGGAGGTCGTTTTCCGCTAA

Upstream 100 bases:

>100_bases
CGCTAATCGCACGTAACGCCTTGCTTTCATATTCCAGTTGTCGCCGCGACGACATTTCGCTAAAGTCACGCCCCTTCTTC
ACTGGCATGGGGATTTTAAG

Downstream 100 bases:

>100_bases
GCGCCTCGCAAGCCCAGCGCTGATGGATTGACATTATTCTTGATGTGGCTTAACGTCAGGAGTGAGGGTAAGGGAGGATT
CCTCCTCCCCCTGGTGTCTT

Product: chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MFIGFDYGTANCSVAIMRDGHPQLLTMENNSALLPSMLCAPTREAVSEWLYRHHDVPATDEETQALLRRAIRYNREEDIE
VGAQSVQFGLASLAHYIDDPQEVWFVKSPKSFLGASGLKPQQVALFEDLVCAMMVHIRHTAHSQLPEAITQAVIGRPINF
QGLGGDDANRQAQGILERAAKRAGFQEVVFQYEPVAAGLDYEATLREEKRVLVVDIGGGTTDCSMLLMGPQWRQRADREN
SLLGHSGCRVGGNDLDIALAFKNLMPLLGMGGETEKGIALPVLPWWNAVAINDVPAQSDFYSSANGRLLNDLVRNAREAD
KVALLLKVWRQRLSYRLVRCAEESKIALSGQADVTARLPFISDDLAVAISQQGLEAALDQPLTRILEQVQLALDSAQEKP
DVIYLTGGSARSPLIKKALSEQLPGIPVAGGDDFGSVTAGLARWAEVVFR

Sequences:

>Translated_450_residues
MFIGFDYGTANCSVAIMRDGHPQLLTMENNSALLPSMLCAPTREAVSEWLYRHHDVPATDEETQALLRRAIRYNREEDIE
VGAQSVQFGLASLAHYIDDPQEVWFVKSPKSFLGASGLKPQQVALFEDLVCAMMVHIRHTAHSQLPEAITQAVIGRPINF
QGLGGDDANRQAQGILERAAKRAGFQEVVFQYEPVAAGLDYEATLREEKRVLVVDIGGGTTDCSMLLMGPQWRQRADREN
SLLGHSGCRVGGNDLDIALAFKNLMPLLGMGGETEKGIALPVLPWWNAVAINDVPAQSDFYSSANGRLLNDLVRNAREAD
KVALLLKVWRQRLSYRLVRCAEESKIALSGQADVTARLPFISDDLAVAISQQGLEAALDQPLTRILEQVQLALDSAQEKP
DVIYLTGGSARSPLIKKALSEQLPGIPVAGGDDFGSVTAGLARWAEVVFR
>Mature_450_residues
MFIGFDYGTANCSVAIMRDGHPQLLTMENNSALLPSMLCAPTREAVSEWLYRHHDVPATDEETQALLRRAIRYNREEDIE
VGAQSVQFGLASLAHYIDDPQEVWFVKSPKSFLGASGLKPQQVALFEDLVCAMMVHIRHTAHSQLPEAITQAVIGRPINF
QGLGGDDANRQAQGILERAAKRAGFQEVVFQYEPVAAGLDYEATLREEKRVLVVDIGGGTTDCSMLLMGPQWRQRADREN
SLLGHSGCRVGGNDLDIALAFKNLMPLLGMGGETEKGIALPVLPWWNAVAINDVPAQSDFYSSANGRLLNDLVRNAREAD
KVALLLKVWRQRLSYRLVRCAEESKIALSGQADVTARLPFISDDLAVAISQQGLEAALDQPLTRILEQVQLALDSAQEKP
DVIYLTGGSARSPLIKKALSEQLPGIPVAGGDDFGSVTAGLARWAEVVFR

Specific function: Unknown

COG id: COG0443

COG function: function code O; Molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heat shock protein 70 family [H]

Homologues:

Organism=Escherichia coli, GI87082035, Length=450, Percent_Identity=88.4444444444444, Blast_Score=825, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018181
- InterPro:   IPR001023
- InterPro:   IPR013126 [H]

Pfam domain/function: PF00012 HSP70 [H]

EC number: NA

Molecular weight: Translated: 49213; Mature: 49213

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS00329 HSP70_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIGFDYGTANCSVAIMRDGHPQLLTMENNSALLPSMLCAPTREAVSEWLYRHHDVPATD
CEEEEECCCCCEEEEEEECCCCCEEEECCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCC
EETQALLRRAIRYNREEDIEVGAQSVQFGLASLAHYIDDPQEVWFVKSPKSFLGASGLKP
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCHHHHCCCCCCH
QQVALFEDLVCAMMVHIRHTAHSQLPEAITQAVIGRPINFQGLGGDDANRQAQGILERAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
KRAGFQEVVFQYEPVAAGLDYEATLREEKRVLVVDIGGGTTDCSMLLMGPQWRQRADREN
HHCCHHHHHHCCCCHHCCCCCHHHHCCCCCEEEEECCCCCCCCEEEEECCHHHHHCCHHC
SLLGHSGCRVGGNDLDIALAFKNLMPLLGMGGETEKGIALPVLPWWNAVAINDVPAQSDF
CCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEECCCCCCCCC
YSSANGRLLNDLVRNAREADKVALLLKVWRQRLSYRLVRCAEESKIALSGQADVTARLPF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEECCC
ISDDLAVAISQQGLEAALDQPLTRILEQVQLALDSAQEKPDVIYLTGGSARSPLIKKALS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH
EQLPGIPVAGGDDFGSVTAGLARWAEVVFR
HHCCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFIGFDYGTANCSVAIMRDGHPQLLTMENNSALLPSMLCAPTREAVSEWLYRHHDVPATD
CEEEEECCCCCEEEEEEECCCCCEEEECCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCC
EETQALLRRAIRYNREEDIEVGAQSVQFGLASLAHYIDDPQEVWFVKSPKSFLGASGLKP
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCHHHHCCCCCCH
QQVALFEDLVCAMMVHIRHTAHSQLPEAITQAVIGRPINFQGLGGDDANRQAQGILERAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
KRAGFQEVVFQYEPVAAGLDYEATLREEKRVLVVDIGGGTTDCSMLLMGPQWRQRADREN
HHCCHHHHHHCCCCHHCCCCCHHHHCCCCCEEEEECCCCCCCCEEEEECCHHHHHCCHHC
SLLGHSGCRVGGNDLDIALAFKNLMPLLGMGGETEKGIALPVLPWWNAVAINDVPAQSDF
CCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEECCCCCCCCC
YSSANGRLLNDLVRNAREADKVALLLKVWRQRLSYRLVRCAEESKIALSGQADVTARLPF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEECCC
ISDDLAVAISQQGLEAALDQPLTRILEQVQLALDSAQEKPDVIYLTGGSARSPLIKKALS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH
EQLPGIPVAGGDDFGSVTAGLARWAEVVFR
HHCCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 6094528; 7940673; 7984428 [H]