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The map label for this gene is asmA [H]

Identifier: 16765450

GI number: 16765450

Start: 2204991

End: 2206847

Strand: Reverse

Name: asmA [H]

Synonym: STM2120

Alternate gene names: 16765450

Gene position: 2206847-2204991 (Counterclockwise)

Preceding gene: 16765451

Following gene: 16765448

Centisome position: 45.43

GC content: 55.47

Gene sequence:

>1857_bases
ATGAGACGATTTCTGACGACGCTGATGATTCTCCTGGTCGTGCTGGTGGCCGGATTCTCTGCGTTGGTATTGTTGGTCAA
TCCGAATGATTTCCGCGCCTATATGGTGCAGCAGGTTGCCGCGCGTAGTGAATATCAGTTGCAACTTGACGGGCCGCTGC
GCTGGCACGTATGGCCGCAACTGAGTATCCTTTCCGGGCGAATGACGCTAACGGCGCGAGGCGCCAGCGAACCGCTGGTG
CGGGCTGACAATATGCGCCTGGATGTTGCTTTATGGCCGCTATTGAGTCATCAGCTTCATGTTAAGCAGGTGATGCTGAA
AGGCGGGGTGATTCAACTGACGCCGCAAACGGAAGCGGTACGCAGCGATGATGCGCCGGTCGCGCCGAAAGATAATACCT
TGCCGGACGTAGCGGAAGATCGCGGCTGGTCGTTTGATATTCGTAGCCTGCGCGTTGCCGACAGCGTGCTGGTTTTCCAG
CATGAAAATGATGATCAGGTCACGGTGCGCGATATTCGTCTGAATATGGAACAAGATGCCGAGCATCGCGGCACGTTTGA
TTTTTCGGGACGCGTGAACCGCGATCAGCGGGATCTTGCTTTATCGTTCAGCGGAACGGTGGATGCTTCCGATTACCCGC
ATAATTTAACCGCGGGTATTGAGCAACTGCGCTGGCAATTGCAGGGCGCGGATCTACCAGCGCAGGGGATTGAGGGGCAG
GGACAATTGCAGGCGCAGTGGCAGGAGGCGCAAAAACGTCTTTCATTTAACCACTTAAATTTAACGGCGAATGACAGTTC
TCTGACCGGGCAAGTTCAGGTAACGCTGGCGGAGCAGCCGGAATGGCAAATTGACCTCCAGTCCAGCAAGCTTAATCTGG
ACAACCTGTTGCCGCATCATAGCGCCGTGGCTCAGACAGGCGGCGCGGTGTCGCAGGGGCAAAATACGCTCCCCCTGACC
AGGCCAGTTATCGCGTCGCGTGTTGGTGCGCCGCCTTATCAGGGGCTGCAAAGCTTTACGGCGGAGATTGCTTTACAGGC
GGATTCAGTTCGCTGGCGGGGAATGGACTTTACCCAGGTTTCGACGAAGATGTCTAATCAGGCCGGATTGCTGGATATTA
CTGATTTGCAGGGGAAACTGGCCGACGGAGAGATGTCGCTGCCCGGCACGCTGGACGCCCGCACCGCCAGTCCGCGCATC
GAATTCCACCCTCGCCTCAACCATGTTGAGATTGGGACTATCCTGAAAGCCTTCAATTATCCGATTAGCCTGACCGGTAA
GATGTCGCTGGTTGGCGATTTCTCCGGGGCGGATATTGACGCAGAGGCATTTCGCCATAGCTGGAAAGGAAAAGCGCATG
TTGACATGAGCAATACGCGCCTTGAAGGAATGAATTTCCAGCAACTGGTGCAGCAGGCCGTAGAGCGAAGCGGCGGCGAC
GCGCAGCAGTCGCAGGAAAATATGGACAACGCGACCCGACTGGATCGCTTCACGACCGATCTGACGCTAAATAAGGGCAC
GCTGACGCTCGACGACATGGTCGGGCAATCTTCTATGCTGGCGTTAACCGGCAGCGGAACGCTGGATCTGGTTAAGCAGA
GCTGTGATACACAATTTAATCTGCGTGTGCTGGGCGGCTGGAACGGCGATAGCAACCTGATCACCTTCCTGAAAGAGACG
CCGGTGCCGTTGCGCGTCTATGGCAAGTGGCAGGAGCTGAACTATACCCTGCAAGTGGATCAGTTATTGCGTAAGCATTT
ACAGGATGAGGCGAAGCGTCGGCTCAATGACTGGGCGGATCGCAATAAAGATACCCGCAACGGTAAAGATGTGAAGAAGC
TGCTGAATAAGCTGTAG

Upstream 100 bases:

>100_bases
GTCAGGATGCCAAATATCGCGATCAGCAGGGCGCTGTCGCCAGCCGGATTGATAAAGACTGAGCCATTCGGCGCAATACT
GCCGGTCCATTGAGGGTAGC

Downstream 100 bases:

>100_bases
TTTTTGGCCAAAGGGCAGAGCCGGATGGCGAGGCTAACGCGCCTCCGGCCTGCCTGGTAAGCAGACCGGGGCAGGCGAAC
AGACGTTACATCTCCTGGTC

Product: assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 618; Mature: 618

Protein sequence:

>618_residues
MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQLSILSGRMTLTARGASEPLV
RADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAVRSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVFQ
HENDDQVTVRDIRLNMEQDAEHRGTFDFSGRVNRDQRDLALSFSGTVDASDYPHNLTAGIEQLRWQLQGADLPAQGIEGQ
GQLQAQWQEAQKRLSFNHLNLTANDSSLTGQVQVTLAEQPEWQIDLQSSKLNLDNLLPHHSAVAQTGGAVSQGQNTLPLT
RPVIASRVGAPPYQGLQSFTAEIALQADSVRWRGMDFTQVSTKMSNQAGLLDITDLQGKLADGEMSLPGTLDARTASPRI
EFHPRLNHVEIGTILKAFNYPISLTGKMSLVGDFSGADIDAEAFRHSWKGKAHVDMSNTRLEGMNFQQLVQQAVERSGGD
AQQSQENMDNATRLDRFTTDLTLNKGTLTLDDMVGQSSMLALTGSGTLDLVKQSCDTQFNLRVLGGWNGDSNLITFLKET
PVPLRVYGKWQELNYTLQVDQLLRKHLQDEAKRRLNDWADRNKDTRNGKDVKKLLNKL

Sequences:

>Translated_618_residues
MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQLSILSGRMTLTARGASEPLV
RADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAVRSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVFQ
HENDDQVTVRDIRLNMEQDAEHRGTFDFSGRVNRDQRDLALSFSGTVDASDYPHNLTAGIEQLRWQLQGADLPAQGIEGQ
GQLQAQWQEAQKRLSFNHLNLTANDSSLTGQVQVTLAEQPEWQIDLQSSKLNLDNLLPHHSAVAQTGGAVSQGQNTLPLT
RPVIASRVGAPPYQGLQSFTAEIALQADSVRWRGMDFTQVSTKMSNQAGLLDITDLQGKLADGEMSLPGTLDARTASPRI
EFHPRLNHVEIGTILKAFNYPISLTGKMSLVGDFSGADIDAEAFRHSWKGKAHVDMSNTRLEGMNFQQLVQQAVERSGGD
AQQSQENMDNATRLDRFTTDLTLNKGTLTLDDMVGQSSMLALTGSGTLDLVKQSCDTQFNLRVLGGWNGDSNLITFLKET
PVPLRVYGKWQELNYTLQVDQLLRKHLQDEAKRRLNDWADRNKDTRNGKDVKKLLNKL
>Mature_618_residues
MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQLSILSGRMTLTARGASEPLV
RADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAVRSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVFQ
HENDDQVTVRDIRLNMEQDAEHRGTFDFSGRVNRDQRDLALSFSGTVDASDYPHNLTAGIEQLRWQLQGADLPAQGIEGQ
GQLQAQWQEAQKRLSFNHLNLTANDSSLTGQVQVTLAEQPEWQIDLQSSKLNLDNLLPHHSAVAQTGGAVSQGQNTLPLT
RPVIASRVGAPPYQGLQSFTAEIALQADSVRWRGMDFTQVSTKMSNQAGLLDITDLQGKLADGEMSLPGTLDARTASPRI
EFHPRLNHVEIGTILKAFNYPISLTGKMSLVGDFSGADIDAEAFRHSWKGKAHVDMSNTRLEGMNFQQLVQQAVERSGGD
AQQSQENMDNATRLDRFTTDLTLNKGTLTLDDMVGQSSMLALTGSGTLDLVKQSCDTQFNLRVLGGWNGDSNLITFLKET
PVPLRVYGKWQELNYTLQVDQLLRKHLQDEAKRRLNDWADRNKDTRNGKDVKKLLNKL

Specific function: Involved in the inhibition of assembly of mutant ompF proteins. In general, could be involved in the assembly of outer membrane proteins [H]

COG id: COG2982

COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788378, Length=618, Percent_Identity=76.2135922330097, Blast_Score=987, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007844 [H]

Pfam domain/function: PF05170 AsmA [H]

EC number: NA

Molecular weight: Translated: 68868; Mature: 68868

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ
CHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCEEEEECCC
LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV
EEEEECEEEEEECCCCCCCEECCCCEEEEEEHHHHHHHHHHHHHHHCCCEEEECCCHHHH
RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVFQHENDDQVTVRDIRLNMEQDA
CCCCCCCCCCCCCCCCCHHCCCCEEEHHEEEEECEEEEEEECCCCEEEEEEEEECCCCCC
EHRGTFDFSGRVNRDQRDLALSFSGTVDASDYPHNLTAGIEQLRWQLQGADLPAQGIEGQ
CCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
GQLQAQWQEAQKRLSFNHLNLTANDSSLTGQVQVTLAEQPEWQIDLQSSKLNLDNLLPHH
CCHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEEECCCCEEEEEECCCCCHHHCCCCH
SAVAQTGGAVSQGQNTLPLTRPVIASRVGAPPYQGLQSFTAEIALQADSVRWRGMDFTQV
HHHHHCCCCHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHEEEEECCEEECCCCHHHH
STKMSNQAGLLDITDLQGKLADGEMSLPGTLDARTASPRIEFHPRLNHVEIGTILKAFNY
HHHHCCCCCEEEEECCCCEECCCCCCCCCCCCCCCCCCCEEECCCCCEEHHHHHHHHHCC
PISLTGKMSLVGDFSGADIDAEAFRHSWKGKAHVDMSNTRLEGMNFQQLVQQAVERSGGD
CEEEEEEEEEEECCCCCCCCHHHHHHCCCCCEEEECCCCEECCCCHHHHHHHHHHCCCCC
AQQSQENMDNATRLDRFTTDLTLNKGTLTLDDMVGQSSMLALTGSGTLDLVKQSCDTQFN
HHHHHHHCCHHHHHHHHEEEEEECCCEEEHHHHCCCCEEEEEECCCHHHHHHHHCCCEEE
LRVLGGWNGDSNLITFLKETPVPLRVYGKWQELNYTLQVDQLLRKHLQDEAKRRLNDWAD
EEEEECCCCCCCEEEEECCCCCCEEEEEEHHHCEEEEEHHHHHHHHHHHHHHHHHHHHHH
RNKDTRNGKDVKKLLNKL
CCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ
CHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCEEEEECCC
LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV
EEEEECEEEEEECCCCCCCEECCCCEEEEEEHHHHHHHHHHHHHHHCCCEEEECCCHHHH
RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVFQHENDDQVTVRDIRLNMEQDA
CCCCCCCCCCCCCCCCCHHCCCCEEEHHEEEEECEEEEEEECCCCEEEEEEEEECCCCCC
EHRGTFDFSGRVNRDQRDLALSFSGTVDASDYPHNLTAGIEQLRWQLQGADLPAQGIEGQ
CCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
GQLQAQWQEAQKRLSFNHLNLTANDSSLTGQVQVTLAEQPEWQIDLQSSKLNLDNLLPHH
CCHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEEECCCCEEEEEECCCCCHHHCCCCH
SAVAQTGGAVSQGQNTLPLTRPVIASRVGAPPYQGLQSFTAEIALQADSVRWRGMDFTQV
HHHHHCCCCHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHEEEEECCEEECCCCHHHH
STKMSNQAGLLDITDLQGKLADGEMSLPGTLDARTASPRIEFHPRLNHVEIGTILKAFNY
HHHHCCCCCEEEEECCCCEECCCCCCCCCCCCCCCCCCCEEECCCCCEEHHHHHHHHHCC
PISLTGKMSLVGDFSGADIDAEAFRHSWKGKAHVDMSNTRLEGMNFQQLVQQAVERSGGD
CEEEEEEEEEEECCCCCCCCHHHHHHCCCCCEEEECCCCEECCCCHHHHHHHHHHCCCCC
AQQSQENMDNATRLDRFTTDLTLNKGTLTLDDMVGQSSMLALTGSGTLDLVKQSCDTQFN
HHHHHHHCCHHHHHHHHEEEEEECCCEEEHHHHCCCCEEEEEECCCHHHHHHHHCCCEEE
LRVLGGWNGDSNLITFLKETPVPLRVYGKWQELNYTLQVDQLLRKHLQDEAKRRLNDWAD
EEEEECCCCCCCEEEEECCCCCCEEEEEEHHHCEEEEEHHHHHHHHHHHHHHHHHHHHHH
RNKDTRNGKDVKKLLNKL
CCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7476172; 9097040; 9278503; 1324907 [H]