Click here to switch to the map view.

The map label for this gene is wcaC [H]

Identifier: 16765443

GI number: 16765443

Start: 2196266

End: 2197483

Strand: Reverse

Name: wcaC [H]

Synonym: STM2113

Alternate gene names: 16765443

Gene position: 2197483-2196266 (Counterclockwise)

Preceding gene: 16765444

Following gene: 16765442

Centisome position: 45.24

GC content: 55.5

Gene sequence:

>1218_bases
ATGAATATTCTGCAATTTAATGTACGGCTGGCGGAAGGCGGCGCGGCGGGAGTGGCGTTGGATCTCCATCTGCGGGCGCT
GCAAAAAGGGCTGACGTCGCATTTTGTTTATGGTTATGGCAAAGGCGGAAAAAAAAGCGTCAGCCACCACCGTTATCCGC
AGGTGATAAAACAGACGCCGCGCGGCACGGCAATCGCTAATATCGCGCTGTTTCGTTTCCTGAATCGCGATCTGTTTGGC
AATCTCGACAATCTTTACCGCACGGTTATCCAGACATCCGGCCCGCTGGTGCTGCATTTTCATGTTCTCCACAGTTACTG
GCTAAACCTGGCGGACATCGTGACGTTTTGCGAAAAAGTCAAAGCGCAAAAACCAGACGTCACGCTGGTCTGGACGTTGC
ACGATCACTGGAGCGTCACCGGGCGTTGCGCCTTCACCGACGGTTGCGAGGGCTGGAAAAGCGGCTGCCAAAAATGCCCG
ACCCTAAGCAATTATCCGCCGGTTAGGGTGGATCGGGCGCACCAGCTTATTGACGGCAAACGTCAGCGCTTTCGGGACAT
GCTGCGGCTGGGCTGCCGGTTTATTTCGCCGAGCCAGCACGTGGCCGAGGCCTTTAACAGCGTTTATGGCGCGGGGCGCT
GCCAGATTATTAACAACGGTATCGATCTGGCGACCGAGGCGATTCTCGCGCAGCTATCACCTGTGCCGCTGAATCCGGGA
AAACCGCGAATTGCCATTGTGGCGCATGACTTGCGTTATGACGGCAAAACTGACCAGCGTCTGGTACACGACATGATGGC
GCTGGGCGAAAAAATTGAACTGCATACCTTCGGTAAATTTTCGCCTTTTACCGGCCAAAACGTTGTTAATCACGGTTTTG
AAACCGATAAGCGCAAATTAATGAGCGCGCTCAATGAGATGGATGCGCTGGTCTTTAGCTCGCGGGTCGATAACTATCCG
CTGATCTTGTGTGAAGCGCTCTCGATCGGCGTACCGGTAATCGCCACCCACAGCGAGGCGGCGCAGGAGGTGCTGGCGAA
ATCCGGCGGCCAGACTTTTGCCGCTACAGATGTACTGCGCCTGGCGCAGCGGCGTAAGCCAGAGATTGCTCAGGCGGTAT
TTGGCGCCACGCTGGACGCCTTTCGTATGCGTAGCCGCGTCGCGTACAGCGGTCAACAGATGCTGGAGGAGTATGTCTCG
TTCTATCAGAATCTGTAG

Upstream 100 bases:

>100_bases
TCGGTAATCACGTCACGATTGGCGCGGGTAGCGTGGTGCTTGACAGTATTCCGGATCATGCGCTGGTGGTGGGAGAAAAA
GCACGGGTGAAGGTCAGCAC

Downstream 100 bases:

>100_bases
CTATCTGCTGCTGCCGCTGATCTACCTACTGGTCAATGTCAAGATTGCCCAACTGGGGGAAAGCTTTCCCATTACCATCG
TCACTTTTTTACCGCTGTTG

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MNILQFNVRLAEGGAAGVALDLHLRALQKGLTSHFVYGYGKGGKKSVSHHRYPQVIKQTPRGTAIANIALFRFLNRDLFG
NLDNLYRTVIQTSGPLVLHFHVLHSYWLNLADIVTFCEKVKAQKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKSGCQKCP
TLSNYPPVRVDRAHQLIDGKRQRFRDMLRLGCRFISPSQHVAEAFNSVYGAGRCQIINNGIDLATEAILAQLSPVPLNPG
KPRIAIVAHDLRYDGKTDQRLVHDMMALGEKIELHTFGKFSPFTGQNVVNHGFETDKRKLMSALNEMDALVFSSRVDNYP
LILCEALSIGVPVIATHSEAAQEVLAKSGGQTFAATDVLRLAQRRKPEIAQAVFGATLDAFRMRSRVAYSGQQMLEEYVS
FYQNL

Sequences:

>Translated_405_residues
MNILQFNVRLAEGGAAGVALDLHLRALQKGLTSHFVYGYGKGGKKSVSHHRYPQVIKQTPRGTAIANIALFRFLNRDLFG
NLDNLYRTVIQTSGPLVLHFHVLHSYWLNLADIVTFCEKVKAQKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKSGCQKCP
TLSNYPPVRVDRAHQLIDGKRQRFRDMLRLGCRFISPSQHVAEAFNSVYGAGRCQIINNGIDLATEAILAQLSPVPLNPG
KPRIAIVAHDLRYDGKTDQRLVHDMMALGEKIELHTFGKFSPFTGQNVVNHGFETDKRKLMSALNEMDALVFSSRVDNYP
LILCEALSIGVPVIATHSEAAQEVLAKSGGQTFAATDVLRLAQRRKPEIAQAVFGATLDAFRMRSRVAYSGQQMLEEYVS
FYQNL
>Mature_405_residues
MNILQFNVRLAEGGAAGVALDLHLRALQKGLTSHFVYGYGKGGKKSVSHHRYPQVIKQTPRGTAIANIALFRFLNRDLFG
NLDNLYRTVIQTSGPLVLHFHVLHSYWLNLADIVTFCEKVKAQKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKSGCQKCP
TLSNYPPVRVDRAHQLIDGKRQRFRDMLRLGCRFISPSQHVAEAFNSVYGAGRCQIINNGIDLATEAILAQLSPVPLNPG
KPRIAIVAHDLRYDGKTDQRLVHDMMALGEKIELHTFGKFSPFTGQNVVNHGFETDKRKLMSALNEMDALVFSSRVDNYP
LILCEALSIGVPVIATHSEAAQEVLAKSGGQTFAATDVLRLAQRRKPEIAQAVFGATLDAFRMRSRVAYSGQQMLEEYVS
FYQNL

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788370, Length=405, Percent_Identity=80.9876543209877, Blast_Score=704, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 45164; Mature: 45164

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILQFNVRLAEGGAAGVALDLHLRALQKGLTSHFVYGYGKGGKKSVSHHRYPQVIKQTP
CCEEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHCCC
RGTAIANIALFRFLNRDLFGNLDNLYRTVIQTSGPLVLHFHVLHSYWLNLADIVTFCEKV
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
KAQKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKSGCQKCPTLSNYPPVRVDRAHQLIDGK
HCCCCCEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
RQRFRDMLRLGCRFISPSQHVAEAFNSVYGAGRCQIINNGIDLATEAILAQLSPVPLNPG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCC
KPRIAIVAHDLRYDGKTDQRLVHDMMALGEKIELHTFGKFSPFTGQNVVNHGFETDKRKL
CCEEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHCCCCHHHHHH
MSALNEMDALVFSSRVDNYPLILCEALSIGVPVIATHSEAAQEVLAKSGGQTFAATDVLR
HHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCCEEECCHHHHHHHHHHCCCCCHHHHHHHH
LAQRRKPEIAQAVFGATLDAFRMRSRVAYSGQQMLEEYVSFYQNL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNILQFNVRLAEGGAAGVALDLHLRALQKGLTSHFVYGYGKGGKKSVSHHRYPQVIKQTP
CCEEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHCCC
RGTAIANIALFRFLNRDLFGNLDNLYRTVIQTSGPLVLHFHVLHSYWLNLADIVTFCEKV
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
KAQKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKSGCQKCPTLSNYPPVRVDRAHQLIDGK
HCCCCCEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
RQRFRDMLRLGCRFISPSQHVAEAFNSVYGAGRCQIINNGIDLATEAILAQLSPVPLNPG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCC
KPRIAIVAHDLRYDGKTDQRLVHDMMALGEKIELHTFGKFSPFTGQNVVNHGFETDKRKL
CCEEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHCCCCHHHHHH
MSALNEMDALVFSSRVDNYPLILCEALSIGVPVIATHSEAAQEVLAKSGGQTFAATDVLR
HHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCCEEECCHHHHHHHHHHCCCCCHHHHHHHH
LAQRRKPEIAQAVFGATLDAFRMRSRVAYSGQQMLEEYVSFYQNL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759852; 9278503 [H]