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The map label for this gene is wcaE [H]

Identifier: 16765441

GI number: 16765441

Start: 2194318

End: 2195064

Strand: Reverse

Name: wcaE [H]

Synonym: STM2111

Alternate gene names: 16765441

Gene position: 2195064-2194318 (Counterclockwise)

Preceding gene: 16765442

Following gene: 16765440

Centisome position: 45.19

GC content: 48.73

Gene sequence:

>747_bases
ATGTTTTTAAGCGTCGTTACCGTCGCCTTTCGCAATTACGAAGGGGTGGTAAAAACCTGGCGCTCGCTGCGCAATCTGGC
GCGCGATCCGGGTCTGTCATTTGAATGGATCGTAGTGGATGGCGGTTCGGAGGACGGCACGCGCGAATTTCTGCGAAAAC
GTCACGGTGAGTTTAACCTGCGTTTTATCAGTGAAAAGGATCGCGGTATTTATGATGCCATGAACAAAGGCATTGCCTTG
GCGCAGGGGCGCTATACCCTGTTTCTTAATTCCGGTGATGCGTTCCATGATGATGCCGCGCTGTTTGTCCGCCAACTGGC
GCGACAAAAGGGCGAGGCGATGTATATTGGCGACGCGCTGCTGGATTTTGGCGGCGGGCATAAAATACGCCGGAAGGCTA
AACCCGGGTATTATATCTACCATAGTTTGCCAGCCAGCCATCAGGCGATATTTTTCCCGACGGCAGCGTTAAAAAAGTAT
CCTTATGATCTGCAATATCATGTCTCTTCAGATTATGCGCTGGCGGCCCGTCTCTATAAAGCAGGCTATCCTTTTCGGCG
AATTAACGGACTGGTATCTGAATTTTCAATGGGCGGCGTGTCAACCTCGAATAATCTGGAATTATGTCAGGATGCAAAAA
ACGTACAGCGAAAAATATTACGTGTGCCAGGATTTTGGGCGCAATTATCCTATTTATTACGTCTGAAAACGACGGGTAAA
ACAAAAGCGCGGTATAACAAAGTCTAA

Upstream 100 bases:

>100_bases
GTTTTTTACCGGTTCAATATTTAGCCCGGAATATGCTTTTTTAATCGTCTGTCCGTTCATTTTGCGCAAGGCGTTAAAAA
TTTCATAACGGGGTGGTTGC

Downstream 100 bases:

>100_bases
TCACCGGGAGTTATTATGCAGGATCTTAGCGGCTTTACGGTGCCGAAGGGGTTCCGCGGCGCTAATGCGCTAAAAGTACA
ATTATGGTGGGCGGTACAGG

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MFLSVVTVAFRNYEGVVKTWRSLRNLARDPGLSFEWIVVDGGSEDGTREFLRKRHGEFNLRFISEKDRGIYDAMNKGIAL
AQGRYTLFLNSGDAFHDDAALFVRQLARQKGEAMYIGDALLDFGGGHKIRRKAKPGYYIYHSLPASHQAIFFPTAALKKY
PYDLQYHVSSDYALAARLYKAGYPFRRINGLVSEFSMGGVSTSNNLELCQDAKNVQRKILRVPGFWAQLSYLLRLKTTGK
TKARYNKV

Sequences:

>Translated_248_residues
MFLSVVTVAFRNYEGVVKTWRSLRNLARDPGLSFEWIVVDGGSEDGTREFLRKRHGEFNLRFISEKDRGIYDAMNKGIAL
AQGRYTLFLNSGDAFHDDAALFVRQLARQKGEAMYIGDALLDFGGGHKIRRKAKPGYYIYHSLPASHQAIFFPTAALKKY
PYDLQYHVSSDYALAARLYKAGYPFRRINGLVSEFSMGGVSTSNNLELCQDAKNVQRKILRVPGFWAQLSYLLRLKTTGK
TKARYNKV
>Mature_248_residues
MFLSVVTVAFRNYEGVVKTWRSLRNLARDPGLSFEWIVVDGGSEDGTREFLRKRHGEFNLRFISEKDRGIYDAMNKGIAL
AQGRYTLFLNSGDAFHDDAALFVRQLARQKGEAMYIGDALLDFGGGHKIRRKAKPGYYIYHSLPASHQAIFFPTAALKKY
PYDLQYHVSSDYALAARLYKAGYPFRRINGLVSEFSMGGVSTSNNLELCQDAKNVQRKILRVPGFWAQLSYLLRLKTTGK
TKARYNKV

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788368, Length=248, Percent_Identity=71.7741935483871, Blast_Score=377, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 28214; Mature: 28214

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLSVVTVAFRNYEGVVKTWRSLRNLARDPGLSFEWIVVDGGSEDGTREFLRKRHGEFNL
CHHHHEEHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCEEE
RFISEKDRGIYDAMNKGIALAQGRYTLFLNSGDAFHDDAALFVRQLARQKGEAMYIGDAL
EEECCCCCCHHHHHCCCEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEECHHH
LDFGGGHKIRRKAKPGYYIYHSLPASHQAIFFPTAALKKYPYDLQYHVSSDYALAARLYK
HHCCCCCEEHHCCCCCEEEEECCCCCCCEEEEEHHHHHHCCCCEEEEECCCHHHHHHHHH
AGYPFRRINGLVSEFSMGGVSTSNNLELCQDAKNVQRKILRVPGFWAQLSYLLRLKTTGK
CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCC
TKARYNKV
CCHHCCCC
>Mature Secondary Structure
MFLSVVTVAFRNYEGVVKTWRSLRNLARDPGLSFEWIVVDGGSEDGTREFLRKRHGEFNL
CHHHHEEHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCEEE
RFISEKDRGIYDAMNKGIALAQGRYTLFLNSGDAFHDDAALFVRQLARQKGEAMYIGDAL
EEECCCCCCHHHHHCCCEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEECHHH
LDFGGGHKIRRKAKPGYYIYHSLPASHQAIFFPTAALKKYPYDLQYHVSSDYALAARLYK
HHCCCCCEEHHCCCCCEEEEECCCCCCCEEEEEHHHHHHCCCCEEEEECCCHHHHHHHHH
AGYPFRRINGLVSEFSMGGVSTSNNLELCQDAKNVQRKILRVPGFWAQLSYLLRLKTTGK
CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCC
TKARYNKV
CCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8759852; 9278503 [H]