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The map label for this gene is yeeY [H]

Identifier: 16765399

GI number: 16765399

Start: 2147471

End: 2148385

Strand: Reverse

Name: yeeY [H]

Synonym: STM2069

Alternate gene names: 16765399

Gene position: 2148385-2147471 (Counterclockwise)

Preceding gene: 16765400

Following gene: 16765398

Centisome position: 44.23

GC content: 52.57

Gene sequence:

>915_bases
ATGAAACCACTGCTGGACGTTCTGATTATTCTTGATGCGTTAGAAAAAGAAGGCAGCTTCGCGGCGGCGTCGGCAAAATT
ATTTAAAACGCCGTCCGCCCTCAGTTATACCGTTCATAAGCTGGAAAACGATCTTAATATCCAACTGCTCGACCGTAGCG
GGCATCGCGCGCGATTTACGCGAACCGGTAAGATGCTACTGGAAAAAGGCCGTGAAGTGCTGCACACCGTTCGCGAGCTG
GAAAAGCAGGCGATTAAACTGCATGAAGGCTGGGAGAACGAACTGGTCATCGGTGTGGATGATACCTTTCCCTTTTCTCT
TCTGGCCCCGCTTATCGACGCTTTTTATCAACGCCACAGCGTAACGCGCCTTAAATTTGTTAATGGCGTTCTCGGCGGTT
CATGGGAGACGCTGACGCAGGGAAGGGCGGATATTATTGTTGGCGCCATGCGCGCGCCGCCGCCTGACACCGGCTTTGGC
TTTGCAAGACTGGGCGACCTTGAACTGGTGTTTGCCGTCGCCCCTCATCATCCGCTGGTTCATGAAGAGGAACCGCTTAG
CCGCCAGACGATCAAACGTTTTCGTGCGATTGTGGTTGGCGATAGCGTCCATTCCTCGCGATCAATAGGGTCTGAACTGC
TCGACGCTCAGGAAGCGATTACCGTGTTTGATTTTAAAACCAAGCTGGAGCTGCAAATTAGCGGCCTGGGATGCGGCTAT
TTACCGCGTTATCTGGCGCAGCGATTTTTGGAAAGCGGCGCGCTTATAGAGAAGAAAGTTGTGGCGCAAATCGTCTATGA
ACCGGTGTGGGTTGGCTGGAATGAACAGACCGCCGGGCTGGCCAGTGGCTGGTGGCGGGATGAAATTTTAGCAAATAATG
CTATTGCTGGGGTGTATGCAAAATCGCCGGTTTAA

Upstream 100 bases:

>100_bases
TGAGCTGGGATTTGAATATCAATATCCCGATCCGTTGGTGATGCCGATGGAGTGAGTCGCTGTCCAGCAGGTGGTCGCCA
TATAGCGCAAGGGGACGAGT

Downstream 100 bases:

>100_bases
AAATCAATCGCTTATGAAAAATAATTTTTTGAACGCGCTCGCATTCTCTTGTCATTTCACTTCAATTTAGGGCAGAATAC
GCCGCTTGCAAAAAATGACA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MKPLLDVLIILDALEKEGSFAAASAKLFKTPSALSYTVHKLENDLNIQLLDRSGHRARFTRTGKMLLEKGREVLHTVREL
EKQAIKLHEGWENELVIGVDDTFPFSLLAPLIDAFYQRHSVTRLKFVNGVLGGSWETLTQGRADIIVGAMRAPPPDTGFG
FARLGDLELVFAVAPHHPLVHEEEPLSRQTIKRFRAIVVGDSVHSSRSIGSELLDAQEAITVFDFKTKLELQISGLGCGY
LPRYLAQRFLESGALIEKKVVAQIVYEPVWVGWNEQTAGLASGWWRDEILANNAIAGVYAKSPV

Sequences:

>Translated_304_residues
MKPLLDVLIILDALEKEGSFAAASAKLFKTPSALSYTVHKLENDLNIQLLDRSGHRARFTRTGKMLLEKGREVLHTVREL
EKQAIKLHEGWENELVIGVDDTFPFSLLAPLIDAFYQRHSVTRLKFVNGVLGGSWETLTQGRADIIVGAMRAPPPDTGFG
FARLGDLELVFAVAPHHPLVHEEEPLSRQTIKRFRAIVVGDSVHSSRSIGSELLDAQEAITVFDFKTKLELQISGLGCGY
LPRYLAQRFLESGALIEKKVVAQIVYEPVWVGWNEQTAGLASGWWRDEILANNAIAGVYAKSPV
>Mature_304_residues
MKPLLDVLIILDALEKEGSFAAASAKLFKTPSALSYTVHKLENDLNIQLLDRSGHRARFTRTGKMLLEKGREVLHTVREL
EKQAIKLHEGWENELVIGVDDTFPFSLLAPLIDAFYQRHSVTRLKFVNGVLGGSWETLTQGRADIIVGAMRAPPPDTGFG
FARLGDLELVFAVAPHHPLVHEEEPLSRQTIKRFRAIVVGDSVHSSRSIGSELLDAQEAITVFDFKTKLELQISGLGCGY
LPRYLAQRFLESGALIEKKVVAQIVYEPVWVGWNEQTAGLASGWWRDEILANNAIAGVYAKSPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=302, Percent_Identity=87.0860927152318, Blast_Score=546, Evalue=1e-157,
Organism=Escherichia coli, GI1789492, Length=293, Percent_Identity=36.1774744027304, Blast_Score=182, Evalue=3e-47,
Organism=Escherichia coli, GI1787949, Length=249, Percent_Identity=30.5220883534137, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1786508, Length=288, Percent_Identity=25.6944444444444, Blast_Score=127, Evalue=9e-31,
Organism=Escherichia coli, GI1786713, Length=270, Percent_Identity=24.8148148148148, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1790262, Length=269, Percent_Identity=24.907063197026, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI87082132, Length=261, Percent_Identity=28.3524904214559, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1787601, Length=165, Percent_Identity=24.2424242424242, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI87081904, Length=177, Percent_Identity=28.2485875706215, Blast_Score=62, Evalue=7e-11,
Organism=Escherichia coli, GI157672245, Length=187, Percent_Identity=29.4117647058824, Blast_Score=61, Evalue=1e-10,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33750; Mature: 33750

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLLDVLIILDALEKEGSFAAASAKLFKTPSALSYTVHKLENDLNIQLLDRSGHRARFT
CCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCEEEHH
RTGKMLLEKGREVLHTVRELEKQAIKLHEGWENELVIGVDDTFPFSLLAPLIDAFYQRHS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHC
VTRLKFVNGVLGGSWETLTQGRADIIVGAMRAPPPDTGFGFARLGDLELVFAVAPHHPLV
HHHHHHHHHHCCCCHHHHHCCCHHEEEEECCCCCCCCCCCCEEECCEEEEEEECCCCCCC
HEEEPLSRQTIKRFRAIVVGDSVHSSRSIGSELLDAQEAITVFDFKTKLELQISGLGCGY
CCCCCCHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEECCCCCH
LPRYLAQRFLESGALIEKKVVAQIVYEPVWVGWNEQTAGLASGWWRDEILANNAIAGVYA
HHHHHHHHHHHCCCHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHCCCEEECEE
KSPV
CCCC
>Mature Secondary Structure
MKPLLDVLIILDALEKEGSFAAASAKLFKTPSALSYTVHKLENDLNIQLLDRSGHRARFT
CCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCEEEHH
RTGKMLLEKGREVLHTVRELEKQAIKLHEGWENELVIGVDDTFPFSLLAPLIDAFYQRHS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHC
VTRLKFVNGVLGGSWETLTQGRADIIVGAMRAPPPDTGFGFARLGDLELVFAVAPHHPLV
HHHHHHHHHHCCCCHHHHHCCCHHEEEEECCCCCCCCCCCCEEECCEEEEEEECCCCCCC
HEEEPLSRQTIKRFRAIVVGDSVHSSRSIGSELLDAQEAITVFDFKTKLELQISGLGCGY
CCCCCCHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEECCCCCH
LPRYLAQRFLESGALIEKKVVAQIVYEPVWVGWNEQTAGLASGWWRDEILANNAIAGVYA
HHHHHHHHHHHCCCHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHCCCEEECEE
KSPV
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]