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The map label for this gene is cbiN

Identifier: 16765352

GI number: 16765352

Start: 2102687

End: 2102968

Strand: Reverse

Name: cbiN

Synonym: STM2022

Alternate gene names: 16765352

Gene position: 2102968-2102687 (Counterclockwise)

Preceding gene: 161353594

Following gene: 16765351

Centisome position: 43.29

GC content: 49.65

Gene sequence:

>282_bases
ATGAAAAAAACGTTGATGTTGTTAGCGATGGTGGTGGCGCTGGTGATTCTGCCGTTTTTTATTAACCATGGCGGTGAATA
TGGCGGTTCAGACGGCGAAGCGGAAAGCCAGATTCAGGCTATTGCGCCGCAGTATAAACCCTGGTTTCAGCCGTTATATG
AACCTGCCAGCGGTGAAATTGAAAGCCTGCTGTTTACCCTTCAGGGCTCTCTTGGCGCGGCGGTGATTTTTTATATCCTG
GGGTATTGCAAAGGTAAACAACGCCGTGATGACCGGGCTTGA

Upstream 100 bases:

>100_bases
CTCACACAGATTCCTGTCGCCATTGCTGAAGGTTTATTAACCGTCATGATTTATGACCAGTTAACCAAACGGCAAGTGAT
TACCGTACAAGGACATTAAA

Downstream 100 bases:

>100_bases
TCGACTCAGCTATCAAAGCCGCTGGGCACACGTTGCGCCGCAGCGCAAGTTTTTGCTGTGGCTGGCGATGATGATACTGG
CGTTTGTTCTGCCGCCTGTA

Product: cobalt transport protein CbiN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MKKTLMLLAMVVALVILPFFINHGGEYGGSDGEAESQIQAIAPQYKPWFQPLYEPASGEIESLLFTLQGSLGAAVIFYIL
GYCKGKQRRDDRA

Sequences:

>Translated_93_residues
MKKTLMLLAMVVALVILPFFINHGGEYGGSDGEAESQIQAIAPQYKPWFQPLYEPASGEIESLLFTLQGSLGAAVIFYIL
GYCKGKQRRDDRA
>Mature_93_residues
MKKTLMLLAMVVALVILPFFINHGGEYGGSDGEAESQIQAIAPQYKPWFQPLYEPASGEIESLLFTLQGSLGAAVIFYIL
GYCKGKQRRDDRA

Specific function: May be involved with cobalt transport in association with cobalamin biosynthesis

COG id: COG1930

COG function: function code P; ABC-type cobalt transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiN family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CBIN_SALA4 (B5EWY8)

Other databases:

- EMBL:   CP001138
- RefSeq:   YP_002146979.1
- GeneID:   6793381
- GenomeReviews:   CP001138_GR
- KEGG:   sea:SeAg_B2144
- HOGENOM:   HBG672288
- OMA:   VWEPPSG
- ProtClustDB:   PRK02898
- HAMAP:   MF_00330
- InterPro:   IPR003705
- TIGRFAMs:   TIGR01165

Pfam domain/function: PF02553 CbiN

EC number: NA

Molecular weight: Translated: 10269; Mature: 10269

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf808320)-; HASH(0xfaf74ec)-;

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLMLLAMVVALVILPFFINHGGEYGGSDGEAESQIQAIAPQYKPWFQPLYEPASGEI
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCHH
ESLLFTLQGSLGAAVIFYILGYCKGKQRRDDRA
HHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCH
>Mature Secondary Structure
MKKTLMLLAMVVALVILPFFINHGGEYGGSDGEAESQIQAIAPQYKPWFQPLYEPASGEI
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCHH
ESLLFTLQGSLGAAVIFYILGYCKGKQRRDDRA
HHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA