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The map label for this gene is yedA [H]

Identifier: 16765326

GI number: 16765326

Start: 2072969

End: 2073889

Strand: Direct

Name: yedA [H]

Synonym: STM1990

Alternate gene names: 16765326

Gene position: 2072969-2073889 (Clockwise)

Preceding gene: 16765322

Following gene: 16765331

Centisome position: 42.68

GC content: 56.03

Gene sequence:

>921_bases
ATGCGTTTCCGGCAGTTATTACCTCTTTTTGGCGCGCTTTTTGCCTTGTACATCATTTGGGGGTCTACCTATTTTGTTAT
CCGCATAGGCGTTGAAAGCTGGCCGCCGCTGATGATGGCAGGCGTACGTTTTCTCTCGGCGGGGATGTTGCTCATGGCGT
TTTTGCTGTTGCGCGGCGAAAAACTTCCGCCGCTGCGCCAGACCATCAACGCCGCGCTGATTGGTCTACTGCTGCTGGCG
GTGGGTAACGGTCTGGTGACGGTGGCGGAGCATCAAAACGTGCCATCGGGCATTGCTGCCGTCGTGGTCGCCACTGTCCC
GCTATTTACGCTGTGCTTTAGCTACTTTTTTGGTATTAAAACGCGCAAATTAGAATGGGTGGGGATTGCCATTGGACTTG
CCGGGATTATTCTGCTGAACAGCGGCGGCAACTTAAGCGGCAATCCGTGGGGCGCGATTTTGATCCTGATAGGTTCGATG
AGCTGGGCATTTGGTTCCGTTTACGGCTCGCGCATCGCCCTGCCTGTGGGCATGATGGCGGGTGCGATTGAAATGCTGGC
GGCGGGCGTGGTATTGCTTTGCGCGGCGTTTCTTTCCGGCGAGAAGCTCGCCACGCTGCCTGGTTTATCGGGGTTTATGG
CCGTCGGCTACCTGGCGTTGTTCGGTTCTATTATCGCCATTAATGCCTATATGTACCTGATTCGCAACGTCAGTCCGGCG
CTGGCGACCAGCTACGCCTATGTGAATCCGGTTGTCGCCGTGTTACTTGGCACTGGCCTGGGCGGTGAGAGGTTATCGCC
CGTTGAATGGGCCGCGCTGGGTGTGATTGTGTTTGCCGTAGTGCTGGTGACTCTGGGTAAGTACCTGTTTCCTGTCAAGG
CGGTGGTCACGCCGTGTAAAACGGAAGATTCACGCCAGTAG

Upstream 100 bases:

>100_bases
GTCAACGCCTTTTTATTCCAAAAGGACAATTATAATGCTCGCCAGCATAATAATTTTGACGTTTACTATATTCACCCTTT
TTATTTCACCGTGAGTGATT

Downstream 100 bases:

>100_bases
ATGAATCCCCTGGGTGTCGATCTGCGCGCTGGCGCCGCCGCCGCAGATCCACTCTTCCAGGCGCTCCGCCAACGCCGCGT
CGCTCAATTTCGCTCGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MRFRQLLPLFGALFALYIIWGSTYFVIRIGVESWPPLMMAGVRFLSAGMLLMAFLLLRGEKLPPLRQTINAALIGLLLLA
VGNGLVTVAEHQNVPSGIAAVVVATVPLFTLCFSYFFGIKTRKLEWVGIAIGLAGIILLNSGGNLSGNPWGAILILIGSM
SWAFGSVYGSRIALPVGMMAGAIEMLAAGVVLLCAAFLSGEKLATLPGLSGFMAVGYLALFGSIIAINAYMYLIRNVSPA
LATSYAYVNPVVAVLLGTGLGGERLSPVEWAALGVIVFAVVLVTLGKYLFPVKAVVTPCKTEDSRQ

Sequences:

>Translated_306_residues
MRFRQLLPLFGALFALYIIWGSTYFVIRIGVESWPPLMMAGVRFLSAGMLLMAFLLLRGEKLPPLRQTINAALIGLLLLA
VGNGLVTVAEHQNVPSGIAAVVVATVPLFTLCFSYFFGIKTRKLEWVGIAIGLAGIILLNSGGNLSGNPWGAILILIGSM
SWAFGSVYGSRIALPVGMMAGAIEMLAAGVVLLCAAFLSGEKLATLPGLSGFMAVGYLALFGSIIAINAYMYLIRNVSPA
LATSYAYVNPVVAVLLGTGLGGERLSPVEWAALGVIVFAVVLVTLGKYLFPVKAVVTPCKTEDSRQ
>Mature_306_residues
MRFRQLLPLFGALFALYIIWGSTYFVIRIGVESWPPLMMAGVRFLSAGMLLMAFLLLRGEKLPPLRQTINAALIGLLLLA
VGNGLVTVAEHQNVPSGIAAVVVATVPLFTLCFSYFFGIKTRKLEWVGIAIGLAGIILLNSGGNLSGNPWGAILILIGSM
SWAFGSVYGSRIALPVGMMAGAIEMLAAGVVLLCAAFLSGEKLATLPGLSGFMAVGYLALFGSIIAINAYMYLIRNVSPA
LATSYAYVNPVVAVLLGTGLGGERLSPVEWAALGVIVFAVVLVTLGKYLFPVKAVVTPCKTEDSRQ

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1788269, Length=306, Percent_Identity=87.9084967320261, Blast_Score=476, Evalue=1e-136,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32344; Mature: 32344

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFRQLLPLFGALFALYIIWGSTYFVIRIGVESWPPLMMAGVRFLSAGMLLMAFLLLRGE
CCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
KLPPLRQTINAALIGLLLLAVGNGLVTVAEHQNVPSGIAAVVVATVPLFTLCFSYFFGIK
CCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
TRKLEWVGIAIGLAGIILLNSGGNLSGNPWGAILILIGSMSWAFGSVYGSRIALPVGMMA
CCEEEHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHH
GAIEMLAAGVVLLCAAFLSGEKLATLPGLSGFMAVGYLALFGSIIAINAYMYLIRNVSPA
HHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LATSYAYVNPVVAVLLGTGLGGERLSPVEWAALGVIVFAVVLVTLGKYLFPVKAVVTPCK
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TEDSRQ
CCCCCC
>Mature Secondary Structure
MRFRQLLPLFGALFALYIIWGSTYFVIRIGVESWPPLMMAGVRFLSAGMLLMAFLLLRGE
CCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
KLPPLRQTINAALIGLLLLAVGNGLVTVAEHQNVPSGIAAVVVATVPLFTLCFSYFFGIK
CCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
TRKLEWVGIAIGLAGIILLNSGGNLSGNPWGAILILIGSMSWAFGSVYGSRIALPVGMMA
CCEEEHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHH
GAIEMLAAGVVLLCAAFLSGEKLATLPGLSGFMAVGYLALFGSIIAINAYMYLIRNVSPA
HHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LATSYAYVNPVVAVLLGTGLGGERLSPVEWAALGVIVFAVVLVTLGKYLFPVKAVVTPCK
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TEDSRQ
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]