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The map label for this gene is slp [H]

Identifier: 16765160

GI number: 16765160

Start: 1917112

End: 1917693

Strand: Reverse

Name: slp [H]

Synonym: STM1819

Alternate gene names: 16765160

Gene position: 1917693-1917112 (Counterclockwise)

Preceding gene: 16765161

Following gene: 16765159

Centisome position: 39.48

GC content: 56.19

Gene sequence:

>582_bases
ATGGCGGTTCAAAAACGGTTAATAAAAGGGGCGCTGGCGTGCGCTTTTGCGCTTATGCTGAGCGGTTGCGTGACTATCCC
GGATGCCATTAAAGGTTCGAGTCCGACGCCGCAGCAGGATTTGGTGCGGGTGATGAATGCGCCGCAGCTCTATATCGGGC
AAGAGGCGCGTTTTGGCGGCAAAGTTGTGGCGGTGCAAAATCAGCAGGGAAAAACCCGGCTTGAAATCGCGACCGTACCG
CTTGATAGCGGCGCGCGTCCTGTTCTGGGCGAAGCCTCGCGCGGCAGAATTTTTGCCGATGTGAACGGTTTTCTGGACCC
GGTGGACTTCCGTGGCCAGTTAGTTACCGTTGTCGGCCCGATAACCGGCACGGTTGACGGTAAAATCGGCAATACGCCGT
ATAAATTTATGCTGATGCAGGCTACCGGCTATAAACGCTGGCATCTTGTTCAGCAGGTCGTCATGCCTCCACAGCCGATC
GATCCGTGGTTTTACGGCGGACGCGCCTGGCCTTATGGCTATGGCGGTTGGGGATGGTATAACCCTGGACCCGCGGAGGT
TCAGACGATAGTAACAGAGTAA

Upstream 100 bases:

>100_bases
CGTGGAAGAAACTTCCCGGCAAAGAATGACTCTCACTACTATTACCCCCCATACTTTATGCTGTGGGGTGGAATAGAGGT
CGAGAAAAAGGAGTCGCATC

Downstream 100 bases:

>100_bases
CTCTTTGTTTTATCAATAAAAGAAACAGCGGCTGGTCCGCTGTTTCTGCATTCATAGAGACATAATAAAAATAAATAGTG
ACGCGCTTCGCAACCTTTCA

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MAVQKRLIKGALACAFALMLSGCVTIPDAIKGSSPTPQQDLVRVMNAPQLYIGQEARFGGKVVAVQNQQGKTRLEIATVP
LDSGARPVLGEASRGRIFADVNGFLDPVDFRGQLVTVVGPITGTVDGKIGNTPYKFMLMQATGYKRWHLVQQVVMPPQPI
DPWFYGGRAWPYGYGGWGWYNPGPAEVQTIVTE

Sequences:

>Translated_193_residues
MAVQKRLIKGALACAFALMLSGCVTIPDAIKGSSPTPQQDLVRVMNAPQLYIGQEARFGGKVVAVQNQQGKTRLEIATVP
LDSGARPVLGEASRGRIFADVNGFLDPVDFRGQLVTVVGPITGTVDGKIGNTPYKFMLMQATGYKRWHLVQQVVMPPQPI
DPWFYGGRAWPYGYGGWGWYNPGPAEVQTIVTE
>Mature_192_residues
AVQKRLIKGALACAFALMLSGCVTIPDAIKGSSPTPQQDLVRVMNAPQLYIGQEARFGGKVVAVQNQQGKTRLEIATVPL
DSGARPVLGEASRGRIFADVNGFLDPVDFRGQLVTVVGPITGTVDGKIGNTPYKFMLMQATGYKRWHLVQQVVMPPQPID
PWFYGGRAWPYGYGGWGWYNPGPAEVQTIVTE

Specific function: Unknown

COG id: COG3065

COG function: function code M; Starvation-inducible outer membrane lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788108, Length=193, Percent_Identity=90.1554404145078, Blast_Score=331, Evalue=2e-92,
Organism=Escherichia coli, GI87082278, Length=179, Percent_Identity=41.340782122905, Blast_Score=135, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004658 [H]

Pfam domain/function: PF03843 Slp [H]

EC number: NA

Molecular weight: Translated: 20964; Mature: 20832

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVQKRLIKGALACAFALMLSGCVTIPDAIKGSSPTPQQDLVRVMNAPQLYIGQEARFGG
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHCCCEEEECCCCCCCC
KVVAVQNQQGKTRLEIATVPLDSGARPVLGEASRGRIFADVNGFLDPVDFRGQLVTVVGP
EEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEC
ITGTVDGKIGNTPYKFMLMQATGYKRWHLVQQVVMPPQPIDPWFYGGRAWPYGYGGWGWY
CEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCC
NPGPAEVQTIVTE
CCCHHHEEEEECC
>Mature Secondary Structure 
AVQKRLIKGALACAFALMLSGCVTIPDAIKGSSPTPQQDLVRVMNAPQLYIGQEARFGG
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHCCCEEEECCCCCCCC
KVVAVQNQQGKTRLEIATVPLDSGARPVLGEASRGRIFADVNGFLDPVDFRGQLVTVVGP
EEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEC
ITGTVDGKIGNTPYKFMLMQATGYKRWHLVQQVVMPPQPIDPWFYGGRAWPYGYGGWGWY
CEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCC
NPGPAEVQTIVTE
CCCHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]