Click here to switch to the map view.

The map label for this gene is yciB [H]

Identifier: 16765079

GI number: 16765079

Start: 1830099

End: 1830638

Strand: Direct

Name: yciB [H]

Synonym: STM1735

Alternate gene names: 16765079

Gene position: 1830099-1830638 (Clockwise)

Preceding gene: 16765078

Following gene: 16765080

Centisome position: 37.68

GC content: 47.04

Gene sequence:

>540_bases
ATGAAGCAGTTTCTGGATTTTTTACCGCTGGTTGTCTTTTTTGCGTTTTATAAACTTTATGACATCTATGCGGCGACCTC
CGCACTGATTGTCGCGACGGCAATCGTGCTGATTTATAGCTGGGTGCGCTATCGGAAAATAGAGAAGATGGCGCTGATTA
CCTTTGTTCTGGTTGCCGTCTTCGGCGGTCTGACGCTCTTCTTCCATAACGATGAATTTATTAAATGGAAGGTGACGGTT
ATTTATGCGCTGTTCGCCGGCGCGCTGTTAATAAGCCAGTGGGTGATGAAAAAACCGTTAATTCAACGTATGTTAGGTAA
AGAACTGGCGTTGCCGCAGCAGGTCTGGTCAAAGCTGAACCTGGCGTGGGCGCTGTTTTTTATTGCGTGCGGTCTGGCTA
ACATTTATATCGCCTTCTGGTTGCCGCAAAATATCTGGGTCAACTTTAAGGTCTTTGGACTCACGGCGCTGACGCTCATT
TTTACCCTGCTGAGCGGCGTCTATATCTACCGGCATCTGCCACAGGAAGATAAATCATAA

Upstream 100 bases:

>100_bases
TGCTTATCTACTTATTCCGCCTGTATATGTTGATTCGCCAATAATCCGCAATGCGCCGTTACGCGGCGCATTCGACGCTC
GTTGATGATGGAATCGAAGA

Downstream 100 bases:

>100_bases
CCCTCCCGTGACTTATCATCGCCAGACTGCGAACGCCTGGCGATATTTTCTCCGCCTTTACGCCCTGCGCTTTCCCGTCA
GTACCTTTATTCCCACTATT

Product: intracellular septation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKQFLDFLPLVVFFAFYKLYDIYAATSALIVATAIVLIYSWVRYRKIEKMALITFVLVAVFGGLTLFFHNDEFIKWKVTV
IYALFAGALLISQWVMKKPLIQRMLGKELALPQQVWSKLNLAWALFFIACGLANIYIAFWLPQNIWVNFKVFGLTALTLI
FTLLSGVYIYRHLPQEDKS

Sequences:

>Translated_179_residues
MKQFLDFLPLVVFFAFYKLYDIYAATSALIVATAIVLIYSWVRYRKIEKMALITFVLVAVFGGLTLFFHNDEFIKWKVTV
IYALFAGALLISQWVMKKPLIQRMLGKELALPQQVWSKLNLAWALFFIACGLANIYIAFWLPQNIWVNFKVFGLTALTLI
FTLLSGVYIYRHLPQEDKS
>Mature_179_residues
MKQFLDFLPLVVFFAFYKLYDIYAATSALIVATAIVLIYSWVRYRKIEKMALITFVLVAVFGGLTLFFHNDEFIKWKVTV
IYALFAGALLISQWVMKKPLIQRMLGKELALPQQVWSKLNLAWALFFIACGLANIYIAFWLPQNIWVNFKVFGLTALTLI
FTLLSGVYIYRHLPQEDKS

Specific function: Involved in cell division; probably involved in intracellular septation [H]

COG id: COG2917

COG function: function code D; Intracellular septation protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ispZ family [H]

Homologues:

Organism=Escherichia coli, GI1787507, Length=179, Percent_Identity=93.2960893854749, Blast_Score=342, Evalue=1e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006008 [H]

Pfam domain/function: PF04279 IspA [H]

EC number: NA

Molecular weight: Translated: 20763; Mature: 20763

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQFLDFLPLVVFFAFYKLYDIYAATSALIVATAIVLIYSWVRYRKIEKMALITFVLVAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGGLTLFFHNDEFIKWKVTVIYALFAGALLISQWVMKKPLIQRMLGKELALPQQVWSKLN
HCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LAWALFFIACGLANIYIAFWLPQNIWVNFKVFGLTALTLIFTLLSGVYIYRHLPQEDKS
HHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKQFLDFLPLVVFFAFYKLYDIYAATSALIVATAIVLIYSWVRYRKIEKMALITFVLVAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGGLTLFFHNDEFIKWKVTVIYALFAGALLISQWVMKKPLIQRMLGKELALPQQVWSKLN
HCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LAWALFFIACGLANIYIAFWLPQNIWVNFKVFGLTALTLIFTLLSGVYIYRHLPQEDKS
HHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA