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The map label for this gene is ycjI [H]

Identifier: 16765023

GI number: 16765023

Start: 1773800

End: 1774528

Strand: Direct

Name: ycjI [H]

Synonym: STM1680

Alternate gene names: 16765023

Gene position: 1773800-1774528 (Clockwise)

Preceding gene: 16765021

Following gene: 16765025

Centisome position: 36.52

GC content: 58.02

Gene sequence:

>729_bases
ATGACTGTCACCCGCCCCCGTGCCGAGCGCGGCGCATTTCCGCCAGGCACTGAACATTATGGACGTTCGCTACTAGGCGC
GCCGCTAATCTGGTTTCCGGCGCCTGCCGTCAATCGCGAAAGCGGCCTGATACTGGCTGGCACCCACGGGGATGAAACCT
CATCCGTGGTGACGCTCTCCTGTGCGTTACGCACCTTAAATCCAACCCTTCGCCGTCATCATGTCGTACTTGCCGTTAAT
CCTGATGGCTGTCAACTGGGGTTAAGGGCAAATGCGAATGGCATTGATCTAAACCGTAACTTTCCCGCCGCCAACTGGAA
AGCGGGTGAGACAGTTTATCGCTGGAATAGCCGCGCGCAAGAGCGTGATGTCGTGCTGCTAACCGGCGACCATCCCGGCT
CAGAACCGGAAACCCAGGCGCTTTGCCAGTTAATTCATCGACTCCAACCCGCCTGGGTCGTCTCTTTTCACGATCCGCTA
GCCTGCATTGAAGATCCACGTCGCAGCGAGCTAGGCGAGTGGCTGGCCGATGCGTTTGCGTTGCCGCTGGTGACCAGCGT
AGGTTACGAAACGCCCGGTTCGTTTGGCAGCTGGTGCGCCGACCTCAACCTGCACTGCATTACCGCCGAGTTTCCCCCTG
TTTCCGCCGATGAAGCCAGCGAAAAATACTTGCTGGCGATGTCGAATCTGCTCCGCTGGCATCCTAAAGATGGAGTTGAC
CCGTCGTAA

Upstream 100 bases:

>100_bases
CGCGCCATACAAGAGGGTAAATAGAAACCATTTGATAATCGGCGGGTTTTACACAACACTACGATGATTACCCTACTGGT
CTCAGCTTCGGGAAACGCGT

Downstream 100 bases:

>100_bases
AGCGTAGCGCGGGCTCAACATCAACCGCCAGCCATGTTGGGCCATCAAGATCGGCGAAGCTCACCTGCGGCATAAGCGGC
AGCGCGGCGCTAATCGCTCT

Product: murein peptide amidase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MTVTRPRAERGAFPPGTEHYGRSLLGAPLIWFPAPAVNRESGLILAGTHGDETSSVVTLSCALRTLNPTLRRHHVVLAVN
PDGCQLGLRANANGIDLNRNFPAANWKAGETVYRWNSRAQERDVVLLTGDHPGSEPETQALCQLIHRLQPAWVVSFHDPL
ACIEDPRRSELGEWLADAFALPLVTSVGYETPGSFGSWCADLNLHCITAEFPPVSADEASEKYLLAMSNLLRWHPKDGVD
PS

Sequences:

>Translated_242_residues
MTVTRPRAERGAFPPGTEHYGRSLLGAPLIWFPAPAVNRESGLILAGTHGDETSSVVTLSCALRTLNPTLRRHHVVLAVN
PDGCQLGLRANANGIDLNRNFPAANWKAGETVYRWNSRAQERDVVLLTGDHPGSEPETQALCQLIHRLQPAWVVSFHDPL
ACIEDPRRSELGEWLADAFALPLVTSVGYETPGSFGSWCADLNLHCITAEFPPVSADEASEKYLLAMSNLLRWHPKDGVD
PS
>Mature_241_residues
TVTRPRAERGAFPPGTEHYGRSLLGAPLIWFPAPAVNRESGLILAGTHGDETSSVVTLSCALRTLNPTLRRHHVVLAVNP
DGCQLGLRANANGIDLNRNFPAANWKAGETVYRWNSRAQERDVVLLTGDHPGSEPETQALCQLIHRLQPAWVVSFHDPLA
CIEDPRRSELGEWLADAFALPLVTSVGYETPGSFGSWCADLNLHCITAEFPPVSADEASEKYLLAMSNLLRWHPKDGVDP
S

Specific function: Unknown

COG id: COG2866

COG function: function code E; Predicted carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI226510938, Length=242, Percent_Identity=90.9090909090909, Blast_Score=460, Evalue=1e-131,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000834 [H]

Pfam domain/function: PF00246 Peptidase_M14 [H]

EC number: NA

Molecular weight: Translated: 26475; Mature: 26344

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVTRPRAERGAFPPGTEHYGRSLLGAPLIWFPAPAVNRESGLILAGTHGDETSSVVTLS
CCCCCCCHHCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCEEEEECCCCCCCCEEEEE
CALRTLNPTLRRHHVVLAVNPDGCQLGLRANANGIDLNRNFPAANWKAGETVYRWNSRAQ
EHHHHCCHHHHHEEEEEEECCCCCEEEEEECCCCEECCCCCCCCCCCCCCEEEECCCCCC
ERDVVLLTGDHPGSEPETQALCQLIHRLQPAWVVSFHDPLACIEDPRRSELGEWLADAFA
CCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHH
LPLVTSVGYETPGSFGSWCADLNLHCITAEFPPVSADEASEKYLLAMSNLLRWHPKDGVD
HHHHHHCCCCCCCCHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
PS
CC
>Mature Secondary Structure 
TVTRPRAERGAFPPGTEHYGRSLLGAPLIWFPAPAVNRESGLILAGTHGDETSSVVTLS
CCCCCCHHCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCEEEEECCCCCCCCEEEEE
CALRTLNPTLRRHHVVLAVNPDGCQLGLRANANGIDLNRNFPAANWKAGETVYRWNSRAQ
EHHHHCCHHHHHEEEEEEECCCCCEEEEEECCCCEECCCCCCCCCCCCCCEEEECCCCCC
ERDVVLLTGDHPGSEPETQALCQLIHRLQPAWVVSFHDPLACIEDPRRSELGEWLADAFA
CCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHH
LPLVTSVGYETPGSFGSWCADLNLHCITAEFPPVSADEASEKYLLAMSNLLRWHPKDGVD
HHHHHHCCCCCCCCHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
PS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]