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The map label for this gene is ynaI [H]

Identifier: 16765007

GI number: 16765007

Start: 1756772

End: 1757803

Strand: Direct

Name: ynaI [H]

Synonym: STM1663

Alternate gene names: 16765007

Gene position: 1756772-1757803 (Clockwise)

Preceding gene: 16765005

Following gene: 16765009

Centisome position: 36.17

GC content: 44.86

Gene sequence:

>1032_bases
ATGTTCACTGAATTTTTTCTCAAAAACGCATTTAATCTGGCGATACTTTTCAGTTGCGGTATGGCGTTGCTGGTCGTGAG
ATTTTGGCTCAGCCGTAACGTACAGTGGAAGAAAGGATTCACGTTCCATGCGGCACAGTTTTTTATTTATGCAATTATTA
TTGGGACCATCGGGAGCATCCTGAATAATGCTATTGAAGATTATAATTTGCGTTTTATCTCTTCCGGGGTCATTGATTTT
ATCTGCACCTCGCTCATTGCGCTTATTCTGACGATAAAACTTTTCCTGATTATTAACCAATTTGAAAAAGCACAGGTCAA
TAAAGGTAGAGATGTCACCAGTACCCGTATTCTGGCACGGGTCATAAAAATAACCATTATTGTCGCGATTGTCTTACTGT
ATGGCGAACATTTTGGCATGAGTCTGTCCGGTCTGCTGACCTTTGGCGGTATCGGCGGTATCGCTGTTGGTATGGCGGGC
AAAGATGTCCTGAGCAATTTTTTCTCCGGTATTATGCTCTATTTCGATCGCCCCTTCAGTATCGGAGACTGGATTCGTTC
TCCTGACAGAAATATCGAAGGTACGGTCGCCGAAATCGGCTGGCGAATTACGCGAATTAACACATTCGACCACCGCCCGT
TGTACGTGCCTAATTCCGTCTTTTCATCCATTAGCGTTGAGAATCCGGGACGGATGACCAACCGTCGAATAAAAACGGTT
ATTGGGTTACGTTACGAAGATGCCGACAAAATTGGCCTCATTGTTGACGCTATCAGAAACATGTTGCAGGCGCACAGAGA
TATCGATCAGAAACAGACGCTGTTGGTCTATTTTAATGAATTCGCCGACTCTTCGCTGAATATTATGGTGTATTGCTTTA
CCAAAACAACAGTATGGCAGGAATGGCTTGCCGTACAGCAGGATGTTTACCTGAAAATTATTGCGATTGTCCAGGAAAAC
GGCGCTGACTTCGCCTTCCCAAGCCAGACGCTCTATATCGATGACCCGGAGGCCGCGCCTGCGACAAAATAA

Upstream 100 bases:

>100_bases
TTCTTTTTACTTATCGATGATCTACGCGTTTATCCTGGGTAAAATACCTGTTAATCAGGTCATTCTGAGCTGTTATCGTA
GGAAGGAGCGGAAAACAATA

Downstream 100 bases:

>100_bases
AAGATAGCCGGTGCCCGATAAGTGTTATCGGGCACCGAGGCTTCCCTGTCCGGATGGCGGGTTGTTAGCGCCTTCCTTAC
GGTGATCAACGGCTCTTTTC

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MFTEFFLKNAFNLAILFSCGMALLVVRFWLSRNVQWKKGFTFHAAQFFIYAIIIGTIGSILNNAIEDYNLRFISSGVIDF
ICTSLIALILTIKLFLIINQFEKAQVNKGRDVTSTRILARVIKITIIVAIVLLYGEHFGMSLSGLLTFGGIGGIAVGMAG
KDVLSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVAEIGWRITRINTFDHRPLYVPNSVFSSISVENPGRMTNRRIKTV
IGLRYEDADKIGLIVDAIRNMLQAHRDIDQKQTLLVYFNEFADSSLNIMVYCFTKTTVWQEWLAVQQDVYLKIIAIVQEN
GADFAFPSQTLYIDDPEAAPATK

Sequences:

>Translated_343_residues
MFTEFFLKNAFNLAILFSCGMALLVVRFWLSRNVQWKKGFTFHAAQFFIYAIIIGTIGSILNNAIEDYNLRFISSGVIDF
ICTSLIALILTIKLFLIINQFEKAQVNKGRDVTSTRILARVIKITIIVAIVLLYGEHFGMSLSGLLTFGGIGGIAVGMAG
KDVLSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVAEIGWRITRINTFDHRPLYVPNSVFSSISVENPGRMTNRRIKTV
IGLRYEDADKIGLIVDAIRNMLQAHRDIDQKQTLLVYFNEFADSSLNIMVYCFTKTTVWQEWLAVQQDVYLKIIAIVQEN
GADFAFPSQTLYIDDPEAAPATK
>Mature_343_residues
MFTEFFLKNAFNLAILFSCGMALLVVRFWLSRNVQWKKGFTFHAAQFFIYAIIIGTIGSILNNAIEDYNLRFISSGVIDF
ICTSLIALILTIKLFLIINQFEKAQVNKGRDVTSTRILARVIKITIIVAIVLLYGEHFGMSLSGLLTFGGIGGIAVGMAG
KDVLSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVAEIGWRITRINTFDHRPLYVPNSVFSSISVENPGRMTNRRIKTV
IGLRYEDADKIGLIVDAIRNMLQAHRDIDQKQTLLVYFNEFADSSLNIMVYCFTKTTVWQEWLAVQQDVYLKIIAIVQEN
GADFAFPSQTLYIDDPEAAPATK

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI1787591, Length=340, Percent_Identity=76.4705882352941, Blast_Score=545, Evalue=1e-156,
Organism=Escherichia coli, GI1789291, Length=260, Percent_Identity=24.2307692307692, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 38751; Mature: 38751

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: PS01246 UPF0003

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTEFFLKNAFNLAILFSCGMALLVVRFWLSRNVQWKKGFTFHAAQFFIYAIIIGTIGSI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LNNAIEDYNLRFISSGVIDFICTSLIALILTIKLFLIINQFEKAQVNKGRDVTSTRILAR
HHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
VIKITIIVAIVLLYGEHFGMSLSGLLTFGGIGGIAVGMAGKDVLSNFFSGIMLYFDRPFS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHEECCCCHHHHHHHHHHHHHHCCCCCC
IGDWIRSPDRNIEGTVAEIGWRITRINTFDHRPLYVPNSVFSSISVENPGRMTNRRIKTV
HHHHHCCCCCCCCCHHHHHCEEEEEEECCCCCCEECCHHHHHHCCCCCCCCHHHHHHHHH
IGLRYEDADKIGLIVDAIRNMLQAHRDIDQKQTLLVYFNEFADSSLNIMVYCFTKTTVWQ
HCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHCCCCCEEEEEEEECHHHHH
EWLAVQQDVYLKIIAIVQENGADFAFPSQTLYIDDPEAAPATK
HHHHHHHHHHHEEEEEEECCCCCCCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MFTEFFLKNAFNLAILFSCGMALLVVRFWLSRNVQWKKGFTFHAAQFFIYAIIIGTIGSI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LNNAIEDYNLRFISSGVIDFICTSLIALILTIKLFLIINQFEKAQVNKGRDVTSTRILAR
HHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
VIKITIIVAIVLLYGEHFGMSLSGLLTFGGIGGIAVGMAGKDVLSNFFSGIMLYFDRPFS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHEECCCCHHHHHHHHHHHHHHCCCCCC
IGDWIRSPDRNIEGTVAEIGWRITRINTFDHRPLYVPNSVFSSISVENPGRMTNRRIKTV
HHHHHCCCCCCCCCHHHHHCEEEEEEECCCCCCEECCHHHHHHCCCCCCCCHHHHHHHHH
IGLRYEDADKIGLIVDAIRNMLQAHRDIDQKQTLLVYFNEFADSSLNIMVYCFTKTTVWQ
HCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHCCCCCEEEEEEEECHHHHH
EWLAVQQDVYLKIIAIVQENGADFAFPSQTLYIDDPEAAPATK
HHHHHHHHHHHEEEEEEECCCCCCCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]