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The map label for this gene is ynaJ [H]

Identifier: 16765006

GI number: 16765006

Start: 1756279

End: 1756533

Strand: Reverse

Name: ynaJ [H]

Synonym: STM1662

Alternate gene names: 16765006

Gene position: 1756533-1756279 (Counterclockwise)

Preceding gene: 16765008

Following gene: 16765002

Centisome position: 36.16

GC content: 47.84

Gene sequence:

>255_bases
ATGATCATGATGAAGCTGAAATCGGCGAAGGGGAAAAAATTTCTGTTATGCCTGCTGGCAGTGTTTATCGTTGCGGCATC
GGTGGTAACGCGCGCGACTATCGGCGGTGTGATTGAGCAGTATCATATTCCACTGTCCGAGTGGACAAGCTCTATGTATG
CCATTCAGTCGGCAATGATTTTCGTTTACAGTCTGGTGTTCACTATTCTGCTGGCGATTCCTTTGGGGATCTATTTCCTC
GGCGGAGATGAGTAA

Upstream 100 bases:

>100_bases
TTTATGTAAATACAATGTCACGTTTTATAGAGCAGACATCGCGCGATTGTCATGGTATTGTTGCTATCAGGTAAAAAAGT
CATCTGTAAAGGACAATACT

Downstream 100 bases:

>100_bases
CAGGAATAGGGTATTGGCCGGATGGCAGCGCCATCCGGCAGGACGCAAGAGGGATTAATCGTCCTCGTCGTCCAGTTCAA
CCGGTGTTTGATACTCATCA

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MIMMKLKSAKGKKFLLCLLAVFIVAASVVTRATIGGVIEQYHIPLSEWTSSMYAIQSAMIFVYSLVFTILLAIPLGIYFL
GGDE

Sequences:

>Translated_84_residues
MIMMKLKSAKGKKFLLCLLAVFIVAASVVTRATIGGVIEQYHIPLSEWTSSMYAIQSAMIFVYSLVFTILLAIPLGIYFL
GGDE
>Mature_84_residues
MIMMKLKSAKGKKFLLCLLAVFIVAASVVTRATIGGVIEQYHIPLSEWTSSMYAIQSAMIFVYSLVFTILLAIPLGIYFL
GGDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787593, Length=84, Percent_Identity=88.0952380952381, Blast_Score=150, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019685 [H]

Pfam domain/function: PF10749 DUF2534 [H]

EC number: NA

Molecular weight: Translated: 9234; Mature: 9234

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMMKLKSAKGKKFLLCLLAVFIVAASVVTRATIGGVIEQYHIPLSEWTSSMYAIQSAMI
CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FVYSLVFTILLAIPLGIYFLGGDE
HHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIMMKLKSAKGKKFLLCLLAVFIVAASVVTRATIGGVIEQYHIPLSEWTSSMYAIQSAMI
CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FVYSLVFTILLAIPLGIYFLGGDE
HHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]