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The map label for this gene is ybcY [H]

Identifier: 16764982

GI number: 16764982

Start: 1729115

End: 1729552

Strand: Direct

Name: ybcY [H]

Synonym: STM1638

Alternate gene names: 16764982

Gene position: 1729115-1729552 (Clockwise)

Preceding gene: 16764981

Following gene: 16764986

Centisome position: 35.6

GC content: 48.4

Gene sequence:

>438_bases
ATGGATTTAAATCCGGATAGCCTGAAAATAGCCGCCAGCCGAGTGGGTAATACGAAAATCCGCGCCACACTACAACACGA
TGTTTTCGACACGTTCCCGGCGGACTGGCACGGGCGCTTCGATTCCGTTTCGATGTACTATCTTCTGCACTGCTTACCTG
GTGAGATGACAACAAAAGCGAAGGCAATTAAAAATGCCGGTATGGCGCTTAAACCCGGCGGCACACTTTTTGGCGCCACG
ATTCTGGGCAAAGAGGTTCCTCACAATGCTTTTGGTAAGAAATTAATGGCTGTTTATAACAAGAAAGGAATATTCAGTAA
TACCAATGATTCAGCCGATACGTTACGCAGCGTGTTGGACGAACATTTCGCTAAGGTGACTTTGGAGCAACATGGCGCCG
TTGCGCTATTTTCCGCCACTACGCCACGCTCATCGTAA

Upstream 100 bases:

>100_bases
TCCTTTCTTCCTGCATCACATGGGCGAGACTCACCTGGATATTGGCGTAGGTACAGGTTATTACCTGAAACATGCACCTG
CGACTCATGCCATTTCGCTG

Downstream 100 bases:

>100_bases
GTACAGGCACTTCCGAGCGGTCGGCAGCGCGATCATGTGGGTTTAACCCGTTGATTAAACATTGGATTACGGAATAGTAA
TTGCTTATTTTATTTGTCAT

Product: SAM-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MDLNPDSLKIAASRVGNTKIRATLQHDVFDTFPADWHGRFDSVSMYYLLHCLPGEMTTKAKAIKNAGMALKPGGTLFGAT
ILGKEVPHNAFGKKLMAVYNKKGIFSNTNDSADTLRSVLDEHFAKVTLEQHGAVALFSATTPRSS

Sequences:

>Translated_145_residues
MDLNPDSLKIAASRVGNTKIRATLQHDVFDTFPADWHGRFDSVSMYYLLHCLPGEMTTKAKAIKNAGMALKPGGTLFGAT
ILGKEVPHNAFGKKLMAVYNKKGIFSNTNDSADTLRSVLDEHFAKVTLEQHGAVALFSATTPRSS
>Mature_145_residues
MDLNPDSLKIAASRVGNTKIRATLQHDVFDTFPADWHGRFDSVSMYYLLHCLPGEMTTKAKAIKNAGMALKPGGTLFGAT
ILGKEVPHNAFGKKLMAVYNKKGIFSNTNDSADTLRSVLDEHFAKVTLEQHGAVALFSATTPRSS

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216
- InterPro:   IPR016584 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 15754; Mature: 15754

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLNPDSLKIAASRVGNTKIRATLQHDVFDTFPADWHGRFDSVSMYYLLHCLPGEMTTKA
CCCCCCHHHHHHHHCCCEEEEEEEHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHH
KAIKNAGMALKPGGTLFGATILGKEVPHNAFGKKLMAVYNKKGIFSNTNDSADTLRSVLD
HHHHHCCCEECCCCCEEHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
EHFAKVTLEQHGAVALFSATTPRSS
HHHHHHHHCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MDLNPDSLKIAASRVGNTKIRATLQHDVFDTFPADWHGRFDSVSMYYLLHCLPGEMTTKA
CCCCCCHHHHHHHHCCCEEEEEEEHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHH
KAIKNAGMALKPGGTLFGATILGKEVPHNAFGKKLMAVYNKKGIFSNTNDSADTLRSVLD
HHHHHCCCEECCCCCEEHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
EHFAKVTLEQHGAVALFSATTPRSS
HHHHHHHHCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]