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The map label for this gene is hdeB [H]

Identifier: 16764906

GI number: 16764906

Start: 1643558

End: 1643887

Strand: Reverse

Name: hdeB [H]

Synonym: STM1562

Alternate gene names: 16764906

Gene position: 1643887-1643558 (Counterclockwise)

Preceding gene: 16764907

Following gene: 16764905

Centisome position: 33.84

GC content: 44.85

Gene sequence:

>330_bases
ATGAATAAATTCTCCCTTGCTACAGCAGGTATTATCGTGGCAGCGCTGGTAACCAGTGTTAGCGTGAATGCGGCAACAGA
TACTACTAAAACAAACGTTACGCCTAAAGGTATGAGCTGCCAGGAGTTTGTTGACCTCAATCCGCAGACGATGGCGCCAG
TCGCTTTCTGGGTGCTGAATGAAGATGAAGATTTTAAAGGCGGGGACTACGTAGATTTCCAGGAAACTGAGACGACAGCA
GTGCCGCTAGCCGTTGAGCTTTGTAAGAAAAACCCGCAGAGTGAATTAAGCAAAATAAAAGACGAAATCAAGAAAGAACT
CTCAAAATAA

Upstream 100 bases:

>100_bases
TTTATTCCTGAGAGAGGAGGGGTATTATTTTCTGTGTTCTACATTAACGGGTTAACGCGCAGATGTAGAGGTTATTTATA
TAATTATTGGAGCAACAACA

Downstream 100 bases:

>100_bases
GAGTAAACTGATATCAAAACCCGGCCTGTGTGTCGGGTTTTACTATTTGTGACACCGTCACAAATAACATCTTCCATTTC
TTCTACCAATCACGTGGTAT

Product: acid-resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MNKFSLATAGIIVAALVTSVSVNAATDTTKTNVTPKGMSCQEFVDLNPQTMAPVAFWVLNEDEDFKGGDYVDFQETETTA
VPLAVELCKKNPQSELSKIKDEIKKELSK

Sequences:

>Translated_109_residues
MNKFSLATAGIIVAALVTSVSVNAATDTTKTNVTPKGMSCQEFVDLNPQTMAPVAFWVLNEDEDFKGGDYVDFQETETTA
VPLAVELCKKNPQSELSKIKDEIKKELSK
>Mature_109_residues
MNKFSLATAGIIVAALVTSVSVNAATDTTKTNVTPKGMSCQEFVDLNPQTMAPVAFWVLNEDEDFKGGDYVDFQETETTA
VPLAVELCKKNPQSELSKIKDEIKKELSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082279, Length=107, Percent_Identity=43.9252336448598, Blast_Score=95, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010486 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11873; Mature: 11873

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKFSLATAGIIVAALVTSVSVNAATDTTKTNVTPKGMSCQEFVDLNPQTMAPVAFWVLN
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEC
EDEDFKGGDYVDFQETETTAVPLAVELCKKNPQSELSKIKDEIKKELSK
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNKFSLATAGIIVAALVTSVSVNAATDTTKTNVTPKGMSCQEFVDLNPQTMAPVAFWVLN
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEC
EDEDFKGGDYVDFQETETTAVPLAVELCKKNPQSELSKIKDEIKKELSK
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]