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The map label for this gene is hupF [H]

Identifier: 16764880

GI number: 16764880

Start: 1610389

End: 1610688

Strand: Reverse

Name: hupF [H]

Synonym: STM1535

Alternate gene names: 16764880

Gene position: 1610688-1610389 (Counterclockwise)

Preceding gene: 16764881

Following gene: 16764879

Centisome position: 33.16

GC content: 56.0

Gene sequence:

>300_bases
ATGTGTATTGGCGTTCCTGTGCAGGTTATTTCACCCGGTCAGTGGTTCGCCAAATGCCGCGACCGACACGGCGAGCTTAT
CGACGTTGATATTCGGCTTGTGGCTCCCCCCTTAGCAGGCGCATGGCTGCTGACATTTGGCGGCGCAGCACGACGAGAAA
TGGACGAAGCGGAAGCCGCTGAGGTACTGGCGGCGCTGGACTCACTGGAACAGGCCATGCTCACGCAAAGCGATCCGCTG
ACCGGTTTTGCCGATTTATTGTCTCGCACGCCTGAATTACCGGAGCATTTAAAAAAATGA

Upstream 100 bases:

>100_bases
ATTACAGCCTGTGTATGGAACGCTACGAAGATGAACGCCCAGATGCGCAAAGCGCTTGCCGGGTCGGCGATATTCGGGTG
CTACAGAGAGAGAAATCATA

Downstream 100 bases:

>100_bases
CTATCTCACCCCAAAATCCTGTTTGTCCACTGGCGGATAAAGGCTTTCTGGTTACCGATGCGCAAACGCTCCCGTCGTTG
ATTAATGCGCATCCGACTCT

Product: hydrogenase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MCIGVPVQVISPGQWFAKCRDRHGELIDVDIRLVAPPLAGAWLLTFGGAARREMDEAEAAEVLAALDSLEQAMLTQSDPL
TGFADLLSRTPELPEHLKK

Sequences:

>Translated_99_residues
MCIGVPVQVISPGQWFAKCRDRHGELIDVDIRLVAPPLAGAWLLTFGGAARREMDEAEAAEVLAALDSLEQAMLTQSDPL
TGFADLLSRTPELPEHLKK
>Mature_99_residues
MCIGVPVQVISPGQWFAKCRDRHGELIDVDIRLVAPPLAGAWLLTFGGAARREMDEAEAAEVLAALDSLEQAMLTQSDPL
TGFADLLSRTPELPEHLKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 10767; Mature: 10767

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS01097 HUPF_HYPC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCIGVPVQVISPGQWFAKCRDRHGELIDVDIRLVAPPLAGAWLLTFGGAARREMDEAEAA
CCCCCCCEEECCCHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHH
EVLAALDSLEQAMLTQSDPLTGFADLLSRTPELPEHLKK
HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHCC
>Mature Secondary Structure
MCIGVPVQVISPGQWFAKCRDRHGELIDVDIRLVAPPLAGAWLLTFGGAARREMDEAEAA
CCCCCCCEEECCCHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHH
EVLAALDSLEQAMLTQSDPLTGFADLLSRTPELPEHLKK
HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1597428 [H]