| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is tus [H]
Identifier: 16764816
GI number: 16764816
Start: 1545400
End: 1546329
Strand: Reverse
Name: tus [H]
Synonym: STM1470
Alternate gene names: 16764816
Gene position: 1546329-1545400 (Counterclockwise)
Preceding gene: 16764817
Following gene: 16764813
Centisome position: 31.83
GC content: 53.23
Gene sequence:
>930_bases ATGTCCCGCTACGATCTCGTTGAACGCCTGAATGGCACTTTTCGCCAGATAGAACAACACCTGGCGGCGCTGACGGATAA TCTACAGCAGCATTCGCTACTTATCGCCCGTGTCTTTTCACTGCCGCAGGTGACCAAAGAGGCGGAACATGCGCCGCTGG ATACTATCGAGGTAACGCAACATCTGGGGAAAGAGGCCGAAGCGCTGGCGCTACGTCACTATCGCCATTTGTTTATTCAA CAGCAGTCCGAAAACCGCAGCAGTAAAGCCGCCGTCCGCCTGCCTGGCGTCTTATGCTATCAAGTGGATAATGCGACACA GTTAGATCTGGAAAATCAGATACAGCGCATTAACCAGTTGAAAACCACCTTCGAGCAGATGGTTACGGTAGAGTCCGGTC TTCCCTCAGCGGCACGTTTTGAGTGGGTGCATCGGCATCTACCCGGCTTAATTACGCTGAACGCTTACCGCACGCTGACG CTTATCAATAACCCCGCCACCATACGTTTCGGCTGGGCAAATAAACATATTATTAAAAATTTAAGCCGGGATGAGGTTCT GAGCCAGTTGAAAAAAAGCCTCGCGTCGCCGCGCAGCGTCCCGCCGTGGACGCGCGAACAATGGCAATTCAAGCTGGAAC GGGAATATCAGGATATCGCTGCCTTACCGCAGCAGGCCCGACTCAAGATTAAGCGTCCGGTTAAAGTACAGCCGATCTCC CGCATCTGGTATAAAGGCCAGCAGAAACAGGTGCAACACGCCTGCCCCACGCCGATTATCGCATTAATCAACACGGACAA CGGCGCTGGCGTGCCGGATATTGGCGGGCTGGAAAACTATGACGCCGACAATATTCAGCACCGTTTTAAACCACAGGCGC AGCCGCTGCGACTGATTATTCCGCGACTGCACCTGTATGTGGCGGATTAA
Upstream 100 bases:
>100_bases GATGCCCGACATGACCGCTGCCTGACGCATTTTGCACGCTGGTTGAGCGGCGGGAACTGTGCTATACATATAGTATGTTG TAACTAAAGTGAGTGATACC
Downstream 100 bases:
>100_bases CGTCCCGGCGTCATACTGCCAACCATCAACTCCGGACGTACCCAGGCGTCGAACTCCTCGTCGCTAAGGTATCCTAATGC CACGGCTGAGGCTTTGAGCG
Product: DNA replication terminus site-binding protein
Products: NA
Alternate protein names: Ter-binding protein [H]
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MSRYDLVERLNGTFRQIEQHLAALTDNLQQHSLLIARVFSLPQVTKEAEHAPLDTIEVTQHLGKEAEALALRHYRHLFIQ QQSENRSSKAAVRLPGVLCYQVDNATQLDLENQIQRINQLKTTFEQMVTVESGLPSAARFEWVHRHLPGLITLNAYRTLT LINNPATIRFGWANKHIIKNLSRDEVLSQLKKSLASPRSVPPWTREQWQFKLEREYQDIAALPQQARLKIKRPVKVQPIS RIWYKGQQKQVQHACPTPIIALINTDNGAGVPDIGGLENYDADNIQHRFKPQAQPLRLIIPRLHLYVAD
Sequences:
>Translated_309_residues MSRYDLVERLNGTFRQIEQHLAALTDNLQQHSLLIARVFSLPQVTKEAEHAPLDTIEVTQHLGKEAEALALRHYRHLFIQ QQSENRSSKAAVRLPGVLCYQVDNATQLDLENQIQRINQLKTTFEQMVTVESGLPSAARFEWVHRHLPGLITLNAYRTLT LINNPATIRFGWANKHIIKNLSRDEVLSQLKKSLASPRSVPPWTREQWQFKLEREYQDIAALPQQARLKIKRPVKVQPIS RIWYKGQQKQVQHACPTPIIALINTDNGAGVPDIGGLENYDADNIQHRFKPQAQPLRLIIPRLHLYVAD >Mature_308_residues SRYDLVERLNGTFRQIEQHLAALTDNLQQHSLLIARVFSLPQVTKEAEHAPLDTIEVTQHLGKEAEALALRHYRHLFIQQ QSENRSSKAAVRLPGVLCYQVDNATQLDLENQIQRINQLKTTFEQMVTVESGLPSAARFEWVHRHLPGLITLNAYRTLTL INNPATIRFGWANKHIIKNLSRDEVLSQLKKSLASPRSVPPWTREQWQFKLEREYQDIAALPQQARLKIKRPVKVQPISR IWYKGQQKQVQHACPTPIIALINTDNGAGVPDIGGLENYDADNIQHRFKPQAQPLRLIIPRLHLYVAD
Specific function: Trans-acting protein required for termination of DNA replication. Binds to DNA replication terminator sequences (terA to terF) to prevent the passage of replication forks. The termination efficiency will be affected by the affinity of this protein for the
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tus family [H]
Homologues:
Organism=Escherichia coli, GI1787895, Length=309, Percent_Identity=79.9352750809062, Blast_Score=522, Evalue=1e-149,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008865 [H]
Pfam domain/function: PF05472 Ter [H]
EC number: NA
Molecular weight: Translated: 35487; Mature: 35356
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRYDLVERLNGTFRQIEQHLAALTDNLQQHSLLIARVFSLPQVTKEAEHAPLDTIEVTQ CCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHH HLGKEAEALALRHYRHLFIQQQSENRSSKAAVRLPGVLCYQVDNATQLDLENQIQRINQL HCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEEECCCCCCCHHHHHHHHHHH KTTFEQMVTVESGLPSAARFEWVHRHLPGLITLNAYRTLTLINNPATIRFGWANKHIIKN HHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECEEEEEEECCCCEEEECCCCHHHHHC LSRDEVLSQLKKSLASPRSVPPWTREQWQFKLEREYQDIAALPQQARLKIKRPVKVQPIS CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCEEECCCCCCCHHH RIWYKGQQKQVQHACPTPIIALINTDNGAGVPDIGGLENYDADNIQHRFKPQAQPLRLII HHHHCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHC PRLHLYVAD CHHEEEECC >Mature Secondary Structure SRYDLVERLNGTFRQIEQHLAALTDNLQQHSLLIARVFSLPQVTKEAEHAPLDTIEVTQ CHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHH HLGKEAEALALRHYRHLFIQQQSENRSSKAAVRLPGVLCYQVDNATQLDLENQIQRINQL HCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEEECCCCCCCHHHHHHHHHHH KTTFEQMVTVESGLPSAARFEWVHRHLPGLITLNAYRTLTLINNPATIRFGWANKHIIKN HHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECEEEEEEECCCCEEEECCCCHHHHHC LSRDEVLSQLKKSLASPRSVPPWTREQWQFKLEREYQDIAALPQQARLKIKRPVKVQPIS CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCEEECCCCCCCHHH RIWYKGQQKQVQHACPTPIIALINTDNGAGVPDIGGLENYDADNIQHRFKPQAQPLRLII HHHHCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHC PRLHLYVAD CHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA