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The map label for this gene is ydgK [H]

Identifier: 16764808

GI number: 16764808

Start: 1535006

End: 1535446

Strand: Reverse

Name: ydgK [H]

Synonym: STM1460

Alternate gene names: 16764808

Gene position: 1535446-1535006 (Counterclockwise)

Preceding gene: 308065940

Following gene: 16764807

Centisome position: 31.61

GC content: 51.25

Gene sequence:

>441_bases
ATGACTACAACACCGCCACAACGAATTGGAGGCTGGCTTCTTGGCCCGTTAGCCTGGCTGTTAGTCGCGTTGTTGAGCGC
CTCGCTGGCGTTATTACTCTACGTTATGGCGCTTGCCACACCGCAAACGTTCAAGACGCTTAGCGGACAGGAAACCGGTA
ATTTACTGCTATGGGGCATTTCATTTATTACCGCTATCGCCATGTGGTACTATACCCTGTGGTTGACGATCGCATTCTTC
AAGCGCAGACGCTGCGTGCCGAAGCATTACATTATCTGGCTGCTGGTGTCGGTGTTACTGGCGGTTAAAGCATTTGCCTT
TTCGCCCGTCTCAGATGCCTTTGCCGTGCGTCAGTTACTCTTCCCACTGTTGGCAACGGCGCTCATTGTGCCTTATCTCA
AACGTTCAGCGCGCGTTAAAACAACGTTTGTTAATCCGTAA

Upstream 100 bases:

>100_bases
TATGTGCAATAAAGAAAGTAGCGTTTAACATCAAAAACCTTATAATATTTGCCCCAAAATGAGCGGCATGACCGTTAATG
CGCGTAACCCCGGAGAAGAT

Downstream 100 bases:

>100_bases
TAACCCTACAGTTAACCTGTTGTCGCCTGTGGTAGTTTGACAGATAATAGGCGGCTTTTTTATTTCAGGCCGAAACATGA
CTGATTACCTGCTGCTCTTT

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MTTTPPQRIGGWLLGPLAWLLVALLSASLALLLYVMALATPQTFKTLSGQETGNLLLWGISFITAIAMWYYTLWLTIAFF
KRRRCVPKHYIIWLLVSVLLAVKAFAFSPVSDAFAVRQLLFPLLATALIVPYLKRSARVKTTFVNP

Sequences:

>Translated_146_residues
MTTTPPQRIGGWLLGPLAWLLVALLSASLALLLYVMALATPQTFKTLSGQETGNLLLWGISFITAIAMWYYTLWLTIAFF
KRRRCVPKHYIIWLLVSVLLAVKAFAFSPVSDAFAVRQLLFPLLATALIVPYLKRSARVKTTFVNP
>Mature_145_residues
TTTPPQRIGGWLLGPLAWLLVALLSASLALLLYVMALATPQTFKTLSGQETGNLLLWGISFITAIAMWYYTLWLTIAFFK
RRRCVPKHYIIWLLVSVLLAVKAFAFSPVSDAFAVRQLLFPLLATALIVPYLKRSARVKTTFVNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To Synechocystis PCC 6803 sll0481 [H]

Homologues:

Organism=Escherichia coli, GI87081948, Length=146, Percent_Identity=82.8767123287671, Blast_Score=201, Evalue=1e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019690 [H]

Pfam domain/function: PF10754 DUF2569 [H]

EC number: NA

Molecular weight: Translated: 16357; Mature: 16226

Theoretical pI: Translated: 11.14; Mature: 11.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTPPQRIGGWLLGPLAWLLVALLSASLALLLYVMALATPQTFKTLSGQETGNLLLWGI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHH
SFITAIAMWYYTLWLTIAFFKRRRCVPKHYIIWLLVSVLLAVKAFAFSPVSDAFAVRQLL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
FPLLATALIVPYLKRSARVKTTFVNP
HHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TTTPPQRIGGWLLGPLAWLLVALLSASLALLLYVMALATPQTFKTLSGQETGNLLLWGI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHH
SFITAIAMWYYTLWLTIAFFKRRRCVPKHYIIWLLVSVLLAVKAFAFSPVSDAFAVRQLL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
FPLLATALIVPYLKRSARVKTTFVNP
HHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]