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The map label for this gene is ydgP [H]

Identifier: 16764803

GI number: 16764803

Start: 1529887

End: 1530507

Strand: Reverse

Name: ydgP [H]

Synonym: STM1455

Alternate gene names: 16764803

Gene position: 1530507-1529887 (Counterclockwise)

Preceding gene: 16764804

Following gene: 16764802

Centisome position: 31.51

GC content: 52.01

Gene sequence:

>621_bases
ATGCTGAAAACGATTCGTAAACACGGTATTACGCTGGCGCTTTTTGCCGCAGGCTCTACGGGATTGACCGCGGTGATTAA
TCAGATGACAAAATCAACCATCCACGAACAAGCGCTGCAACAACAACATGCCCTGTTCGATCAGGTATTGCCGCCAGATC
GTTACAATAATAATCTGCAAGAGAGTTGTTATCTGGTCGATGCGCCCGCCCTCGGCAAAGGCACACACCGTGTTTTTATC
GCTCGCAAGGATGATAAACCCGTAGCGGCCATCATTGAGGCTACCGCGCCAGATGGCTATTCCGGCGCTATCCAGCTTAT
TGTTGGCGCAGATTTCAACGGTACCGTCCTGGGGACGCGTGTGACGGAACATCATGAGACGCCAGGGTTAGGTGATAAAA
TTGAGCGCCGTTTGTCTGACTGGATTACCCACTTTAGCGGTAAAACCATCAGTGGTGAAAATGATACGCACTGGGCGGTG
AAAAAAGATGGCGGTGATTTTGATCAATTTACCGGGGCGACAATAACGCCGCGCGCCGTAGTGAATGCGGTTAAACGCGC
GGGGCTGTACGCCGAATCACTGCCCGCTCAGCTCCCCCATTTAACCGCCTGTGGAGAATAG

Upstream 100 bases:

>100_bases
GGACGGCGTTGCTTTTGCTGTCCTGTTGGCGAATATCACGGTTCCTCTGATCGACTACTACACGCGCCCCCGCGTCTATG
GACATCGCAAAGGATAAACC

Downstream 100 bases:

>100_bases
CCATGAGCGAAATAAAAGACATTGTTGTTCAGGGGTTATGGAAAAATAACTCTGCTCTGGTGCAGCTACTTGGCCTGTGC
CCTCTACTGGCGGTGACGTC

Product: electron transport complex protein RnfG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MLKTIRKHGITLALFAAGSTGLTAVINQMTKSTIHEQALQQQHALFDQVLPPDRYNNNLQESCYLVDAPALGKGTHRVFI
ARKDDKPVAAIIEATAPDGYSGAIQLIVGADFNGTVLGTRVTEHHETPGLGDKIERRLSDWITHFSGKTISGENDTHWAV
KKDGGDFDQFTGATITPRAVVNAVKRAGLYAESLPAQLPHLTACGE

Sequences:

>Translated_206_residues
MLKTIRKHGITLALFAAGSTGLTAVINQMTKSTIHEQALQQQHALFDQVLPPDRYNNNLQESCYLVDAPALGKGTHRVFI
ARKDDKPVAAIIEATAPDGYSGAIQLIVGADFNGTVLGTRVTEHHETPGLGDKIERRLSDWITHFSGKTISGENDTHWAV
KKDGGDFDQFTGATITPRAVVNAVKRAGLYAESLPAQLPHLTACGE
>Mature_206_residues
MLKTIRKHGITLALFAAGSTGLTAVINQMTKSTIHEQALQQQHALFDQVLPPDRYNNNLQESCYLVDAPALGKGTHRVFI
ARKDDKPVAAIIEATAPDGYSGAIQLIVGADFNGTVLGTRVTEHHETPGLGDKIERRLSDWITHFSGKTISGENDTHWAV
KKDGGDFDQFTGATITPRAVVNAVKRAGLYAESLPAQLPHLTACGE

Specific function: May be part of a membrane complex involved in electron transport [H]

COG id: COG4659

COG function: function code C; Predicted NADH:ubiquinone oxidoreductase, subunit RnfG

Gene ontology:

Cell location: Cell inner membrane (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rnfG family [H]

Homologues:

Organism=Escherichia coli, GI1787918, Length=206, Percent_Identity=84.9514563106796, Blast_Score=367, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022989
- InterPro:   IPR010209
- InterPro:   IPR007329 [H]

Pfam domain/function: PF04205 FMN_bind [H]

EC number: NA

Molecular weight: Translated: 22238; Mature: 22238

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTIRKHGITLALFAAGSTGLTAVINQMTKSTIHEQALQQQHALFDQVLPPDRYNNNLQ
CCCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
ESCYLVDAPALGKGTHRVFIARKDDKPVAAIIEATAPDGYSGAIQLIVGADFNGTVLGTR
CCEEEEECCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEECE
VTEHHETPGLGDKIERRLSDWITHFSGKTISGENDTHWAVKKDGGDFDQFTGATITPRAV
ECCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCEEEEECCCCCHHHCCCCCCCHHHH
VNAVKRAGLYAESLPAQLPHLTACGE
HHHHHHHCCCHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLKTIRKHGITLALFAAGSTGLTAVINQMTKSTIHEQALQQQHALFDQVLPPDRYNNNLQ
CCCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
ESCYLVDAPALGKGTHRVFIARKDDKPVAAIIEATAPDGYSGAIQLIVGADFNGTVLGTR
CCEEEEECCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEECE
VTEHHETPGLGDKIERRLSDWITHFSGKTISGENDTHWAVKKDGGDFDQFTGATITPRAV
ECCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCEEEEECCCCCHHHCCCCCCCHHHH
VNAVKRAGLYAESLPAQLPHLTACGE
HHHHHHHCCCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]