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The map label for this gene is ssaK

Identifier: 16764761

GI number: 16764761

Start: 1491589

End: 1492263

Strand: Direct

Name: ssaK

Synonym: STM1411

Alternate gene names: 16764761

Gene position: 1491589-1492263 (Clockwise)

Preceding gene: 16764760

Following gene: 16764762

Centisome position: 30.71

GC content: 42.67

Gene sequence:

>675_bases
ATGAGTTTTACTTCACTTCCTCTGACGGAAATTAACCATAAGCTACCCGCTCGAAATATTATTGAGTCACAGTGGATAAC
ATTACAATTAACTTTATTTGCGCAAGAGCAACAAGCTAAGAGAGTTTCACATGCTATTGTGAGCTCCGCTTACCGTAAGG
CTGAAAAAATCATCCGAGACGCCTATCGTTATCAGCGTGAACAGAAAGTTGAGCAGCAACAAGAACTAGCGTGCTTGCGT
AAAAATACGCTGGAAAAAATGGAAGTGGAATGGCTGGAACAGCATGTAAAACATTTACAAGACGATGAAAATCAATTTCG
TTCATTGGTCGATCACGCAGCGCATCATATTAAAAATAGTATAGAACAGGTTCTGTTGGCCTGGTTCGACCAACAGTCGG
TAGACAGTGTTATGTGCCATCGTCTGGCACGCCAGGCCACGGCTATGGCGGAAGAGGGAGCGCTTTATTTGCGTATTCAT
CCTGAAAAAGAGGCATTGATGCGAGAAACTTTTGGCAAGCGGTTTACGTTGATTATCGAGCCTGGTTTCTCTCCCGATCA
GGCTGAACTTTCCTCAACACGATATGCCGTTGAATTTTCACTTTCTCGTCATTTCAACGCGTTACTGAAATGGTTACGTA
ATGGTGAAGATAAAAGAGGTAGCGATGAATATTAA

Upstream 100 bases:

>100_bases
ATGCGGTTTTACATGCGCTATTAGTATTATTACCCCCTCCGCAGCGTATACTTTGGCCGAAGACTTCTCTTACCGAGATT
ATCTTCATGGAGCATTTGCT

Downstream 100 bases:

>100_bases
AATTAATGAGATAAAAATGACGCCCCCTACAGCATTTACCCCTGGCCAGGTTATAGAGGAACAAGAGGTTATTTCGCCTT
CAATGTTAGCTCTCCAGGAG

Product: type III secretion system apparatus protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MSFTSLPLTEINHKLPARNIIESQWITLQLTLFAQEQQAKRVSHAIVSSAYRKAEKIIRDAYRYQREQKVEQQQELACLR
KNTLEKMEVEWLEQHVKHLQDDENQFRSLVDHAAHHIKNSIEQVLLAWFDQQSVDSVMCHRLARQATAMAEEGALYLRIH
PEKEALMRETFGKRFTLIIEPGFSPDQAELSSTRYAVEFSLSRHFNALLKWLRNGEDKRGSDEY

Sequences:

>Translated_224_residues
MSFTSLPLTEINHKLPARNIIESQWITLQLTLFAQEQQAKRVSHAIVSSAYRKAEKIIRDAYRYQREQKVEQQQELACLR
KNTLEKMEVEWLEQHVKHLQDDENQFRSLVDHAAHHIKNSIEQVLLAWFDQQSVDSVMCHRLARQATAMAEEGALYLRIH
PEKEALMRETFGKRFTLIIEPGFSPDQAELSSTRYAVEFSLSRHFNALLKWLRNGEDKRGSDEY
>Mature_223_residues
SFTSLPLTEINHKLPARNIIESQWITLQLTLFAQEQQAKRVSHAIVSSAYRKAEKIIRDAYRYQREQKVEQQQELACLRK
NTLEKMEVEWLEQHVKHLQDDENQFRSLVDHAAHHIKNSIEQVLLAWFDQQSVDSVMCHRLARQATAMAEEGALYLRIHP
EKEALMRETFGKRFTLIIEPGFSPDQAELSSTRYAVEFSLSRHFNALLKWLRNGEDKRGSDEY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SSAK_SALTY (P74853)

Other databases:

- EMBL:   Y09357
- EMBL:   AE006468
- RefSeq:   NP_460376.1
- PRIDE:   P74853
- GeneID:   1252929
- GenomeReviews:   AE006468_GR
- KEGG:   stm:STM1411
- NMPDR:   fig|99287.1.peg.1367
- HOGENOM:   HBG671303
- OMA:   HANIAEQ
- ProtClustDB:   PRK15354
- BioCyc:   STYP99287:STM1411-MONOMER
- InterPro:   IPR012842
- TIGRFAMs:   TIGR02499

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26293; Mature: 26162

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFTSLPLTEINHKLPARNIIESQWITLQLTLFAQEQQAKRVSHAIVSSAYRKAEKIIRD
CCCCCCCHHHHHCCCCHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYRYQREQKVEQQQELACLRKNTLEKMEVEWLEQHVKHLQDDENQFRSLVDHAAHHIKNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
IEQVLLAWFDQQSVDSVMCHRLARQATAMAEEGALYLRIHPEKEALMRETFGKRFTLIIE
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCEEEEEEC
PGFSPDQAELSSTRYAVEFSLSRHFNALLKWLRNGEDKRGSDEY
CCCCCCHHHHHHHHHHEEHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SFTSLPLTEINHKLPARNIIESQWITLQLTLFAQEQQAKRVSHAIVSSAYRKAEKIIRD
CCCCCCHHHHHCCCCHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYRYQREQKVEQQQELACLRKNTLEKMEVEWLEQHVKHLQDDENQFRSLVDHAAHHIKNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
IEQVLLAWFDQQSVDSVMCHRLARQATAMAEEGALYLRIHPEKEALMRETFGKRFTLIIE
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCEEEEEEC
PGFSPDQAELSSTRYAVEFSLSRHFNALLKWLRNGEDKRGSDEY
CCCCCCHHHHHHHHHHEEHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9140973; 11677609