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The map label for this gene is sseA

Identifier: 16764747

GI number: 16764747

Start: 1483601

End: 1483927

Strand: Direct

Name: sseA

Synonym: STM1397

Alternate gene names: 16764747

Gene position: 1483601-1483927 (Clockwise)

Preceding gene: 16764746

Following gene: 16764748

Centisome position: 30.54

GC content: 40.67

Gene sequence:

>327_bases
ATGATGATAAAGAAAAAGGCTGCGTTTAGTGAATATCGTGATTTAGAGCAAAGTTACATGCAGCTAAATCACTGTCTTAA
AAAATTTCACCAAATCCGGGCTAAGGTGAGTCAACAGCTTGCTGAAAGGGCAGAGAGCCCCAAAAATAGCAGAGAGACAG
AGAGTATTCTTCATAACCTATTTCCACAAGGCGTTGCCGGGGTTAACCAGGAGGCCGAGAAGGATTTAAAGAAAATAGTA
AGTTTGTTTAAACAACTTGAAGTACGACTGAAACAACTTAATGCTCAAGCCCCGGTGGAGATACCGTCAGGAAAAACAAA
AAGGTAA

Upstream 100 bases:

>100_bases
TTGGCGAGCACTGCCCAGGTTCAAAATGGCAAGTAAAATAGCCCTAATGGGATAGGCTCTTAGTTAGCACGTTAATTATC
TATCGTGTATATGGAGGGGA

Downstream 100 bases:

>100_bases
AGCATAATGTCTTCAGGAAACATCTTATGGGGAAGTCAAAACCCTATTGTGTTTAAAAATAGCTTCGGCGTCAGCAACGC
TGATACCGGGAGCCAGGATG

Product: secretion system chaperone protein

Products: NA

Alternate protein names: TTSS chaperone sseA; Secretion system effector A

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MMIKKKAAFSEYRDLEQSYMQLNHCLKKFHQIRAKVSQQLAERAESPKNSRETESILHNLFPQGVAGVNQEAEKDLKKIV
SLFKQLEVRLKQLNAQAPVEIPSGKTKR

Sequences:

>Translated_108_residues
MMIKKKAAFSEYRDLEQSYMQLNHCLKKFHQIRAKVSQQLAERAESPKNSRETESILHNLFPQGVAGVNQEAEKDLKKIV
SLFKQLEVRLKQLNAQAPVEIPSGKTKR
>Mature_108_residues
MMIKKKAAFSEYRDLEQSYMQLNHCLKKFHQIRAKVSQQLAERAESPKNSRETESILHNLFPQGVAGVNQEAEKDLKKIV
SLFKQLEVRLKQLNAQAPVEIPSGKTKR

Specific function: Functions as a type III secretion system (TTSS) chaperone, which is required for sseB and sseD accumulation and secretion. May have a direct role in secretion of sseB and sseD, or may facilitate their correct folding, for efficient secretion and function.

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Probable). Note=May associate with the inner membrane

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SSEA_SALTY (O84944)

Other databases:

- EMBL:   AJ224892
- EMBL:   AF020808
- EMBL:   AE006468
- RefSeq:   NP_460362.1
- IntAct:   O84944
- PRIDE:   O84944
- GeneID:   1252915
- GenomeReviews:   AE006468_GR
- KEGG:   stm:STM1397
- NMPDR:   fig|99287.1.peg.1353
- HOGENOM:   HBG673236
- OMA:   ISERAQC
- ProtClustDB:   PRK15365
- BioCyc:   STYP99287:STM1397-MONOMER
- GO:   GO:0005737
- GO:   GO:0009405

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12450; Mature: 12450

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIKKKAAFSEYRDLEQSYMQLNHCLKKFHQIRAKVSQQLAERAESPKNSRETESILHNL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
FPQGVAGVNQEAEKDLKKIVSLFKQLEVRLKQLNAQAPVEIPSGKTKR
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMIKKKAAFSEYRDLEQSYMQLNHCLKKFHQIRAKVSQQLAERAESPKNSRETESILHNL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
FPQGVAGVNQEAEKDLKKIVSLFKQLEVRLKQLNAQAPVEIPSGKTKR
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9786193; 9786194; 11677609