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The map label for this gene is ynhG [H]

Identifier: 16764725

GI number: 16764725

Start: 1457989

End: 1458990

Strand: Direct

Name: ynhG [H]

Synonym: STM1375

Alternate gene names: 16764725

Gene position: 1457989-1458990 (Clockwise)

Preceding gene: 16764724

Following gene: 16764736

Centisome position: 30.02

GC content: 56.99

Gene sequence:

>1002_bases
ATGAAACGTGCGTCTTTCATTACGCTAACTATTATCGGCGCGTATAGCGCGTTACAGGCAGCCTGGGCGGTTGATTATCC
ATTACCGCCCGAAGGCAGCCGTCTTATTGGTCAGAATCAAACCTATACCGTACAGGAAGGTGATAAAAACCTGCAGGCTA
TAGCCCGGCGTTTTGATACGGCGGCGATGCTCATTCTTGAAGCGAACAATACGATTGCGCCGGTGCCTAAGCCCGGTACG
CTAATTACCATTCCCTCGCAGATGCTATTGCCGGATGCGCCCAGGGAAGGCGTTATCGTCAATCTCGCGGAGCTACGGCT
GTATTATTACCCGCCGGGAGAAAACCGCGTACAGGTGTATCCCATCGGCATCGGTTTGCAGGGACTGGAAACTCCCGTCA
TGGACACCCGGATAGGGCAAAAGATCCCCAACCCGACGTGGACGCCGACGGCAGGCATACGCCAACGTTCGCTTGAGCGG
GGGATCACGCTGCCGCCGGTGATCCCTGCCGGGCCAAATAACCCGCTGGGACGCTATGCGCTGCGTCTGGCGCACGGTAA
TGGGGAATATCTCATTCATGGCACCAGCGCGCCGGATAGCGTAGGTCTGCGTGTGAGTTCCGGTTGCATTCGCATGAACG
CGCCGGACATCAAGGCGTTATTTGCGCAGGTCAGAACGGGGACGCCGGTAAAAGTGATTAACCAGCCAGTGAAATTCTCT
GTCGAGCCGAATGGCATTCGTTATGTAGAGGTACACAGGCCGCTATCGCCGGAAGAAGAGCAAAACGTGCAGACAATGCC
CTATGTGTTGCCTGCGGAATTTACCGCGTTCAGAAACGCGCAAGGGGTGGATAGTCGCTTGGTCGATAAGGCGCTATACC
GGCGAGCCGGGTATCCTGTCAGCGTGAGCGCCGGGCAGACGCCGGCGGTAAATACGACCGCAGTCGAATCCGCTCAGAAC
GGTTTTGTCGGGGAAGAGGGGCAAACGCGCGCGACGCAGTAG

Upstream 100 bases:

>100_bases
GCTTTATCCAGAGTGGATAGAGCGTGTATTTTGTTATTCTGATAAGCGAAGCGCTACCAGTCGTCGCAGAGGGCATCACC
AGGAATACAGGAGGTTTGGT

Downstream 100 bases:

>100_bases
CCTTTGCAGCAAACGACGGACAAAAAAATGGCGCACGATGTGCGCCATTTTATATTGTGCGTCAAATTATTTACAGATGC
GGAATACTTTGTTGTCCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MKRASFITLTIIGAYSALQAAWAVDYPLPPEGSRLIGQNQTYTVQEGDKNLQAIARRFDTAAMLILEANNTIAPVPKPGT
LITIPSQMLLPDAPREGVIVNLAELRLYYYPPGENRVQVYPIGIGLQGLETPVMDTRIGQKIPNPTWTPTAGIRQRSLER
GITLPPVIPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFAQVRTGTPVKVINQPVKFS
VEPNGIRYVEVHRPLSPEEEQNVQTMPYVLPAEFTAFRNAQGVDSRLVDKALYRRAGYPVSVSAGQTPAVNTTAVESAQN
GFVGEEGQTRATQ

Sequences:

>Translated_333_residues
MKRASFITLTIIGAYSALQAAWAVDYPLPPEGSRLIGQNQTYTVQEGDKNLQAIARRFDTAAMLILEANNTIAPVPKPGT
LITIPSQMLLPDAPREGVIVNLAELRLYYYPPGENRVQVYPIGIGLQGLETPVMDTRIGQKIPNPTWTPTAGIRQRSLER
GITLPPVIPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFAQVRTGTPVKVINQPVKFS
VEPNGIRYVEVHRPLSPEEEQNVQTMPYVLPAEFTAFRNAQGVDSRLVDKALYRRAGYPVSVSAGQTPAVNTTAVESAQN
GFVGEEGQTRATQ
>Mature_333_residues
MKRASFITLTIIGAYSALQAAWAVDYPLPPEGSRLIGQNQTYTVQEGDKNLQAIARRFDTAAMLILEANNTIAPVPKPGT
LITIPSQMLLPDAPREGVIVNLAELRLYYYPPGENRVQVYPIGIGLQGLETPVMDTRIGQKIPNPTWTPTAGIRQRSLER
GITLPPVIPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFAQVRTGTPVKVINQPVKFS
VEPNGIRYVEVHRPLSPEEEQNVQTMPYVLPAEFTAFRNAQGVDSRLVDKALYRRAGYPVSVSAGQTPAVNTTAVESAQN
GFVGEEGQTRATQ

Specific function: Responsible, at least in part, for generating a meso- diaminopimelyl-3-a meso-diaminopimelyl-3 cross-link [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI1787968, Length=334, Percent_Identity=85.3293413173653, Blast_Score=584, Evalue=1e-168,
Organism=Escherichia coli, GI1787356, Length=284, Percent_Identity=50.3521126760563, Blast_Score=290, Evalue=1e-79,
Organism=Escherichia coli, GI1788299, Length=310, Percent_Identity=44.8387096774194, Blast_Score=244, Evalue=7e-66,
Organism=Escherichia coli, GI1787040, Length=288, Percent_Identity=44.7916666666667, Blast_Score=233, Evalue=1e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR005490 [H]

Pfam domain/function: PF01476 LysM; PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 36130; Mature: 36130

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRASFITLTIIGAYSALQAAWAVDYPLPPEGSRLIGQNQTYTVQEGDKNLQAIARRFDT
CCCCEEEEEEEEEHHHHHHHHEEECCCCCCCCCEEECCCCEEEEECCCCHHHHHHHHHCC
AAMLILEANNTIAPVPKPGTLITIPSQMLLPDAPREGVIVNLAELRLYYYPPGENRVQVY
EEEEEEECCCEECCCCCCCEEEEECHHHHCCCCCCCCEEEEEEEEEEEEECCCCCEEEEE
PIGIGLQGLETPVMDTRIGQKIPNPTWTPTAGIRQRSLERGITLPPVIPAGPNNPLGRYA
EEEECCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
LRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFAQVRTGTPVKVINQPVKFS
EEEEECCCCEEEECCCCCCCCCEEEECCEEEECCCHHHHHHHHHCCCCCHHHCCCCEEEE
VEPNGIRYVEVHRPLSPEEEQNVQTMPYVLPAEFTAFRNAQGVDSRLVDKALYRRAGYPV
ECCCCEEEEEEECCCCCCHHCCCEECCEECCCHHHHHCCCCCCHHHHHHHHHHHHCCCCE
SVSAGQTPAVNTTAVESAQNGFVGEEGQTRATQ
EECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRASFITLTIIGAYSALQAAWAVDYPLPPEGSRLIGQNQTYTVQEGDKNLQAIARRFDT
CCCCEEEEEEEEEHHHHHHHHEEECCCCCCCCCEEECCCCEEEEECCCCHHHHHHHHHCC
AAMLILEANNTIAPVPKPGTLITIPSQMLLPDAPREGVIVNLAELRLYYYPPGENRVQVY
EEEEEEECCCEECCCCCCCEEEEECHHHHCCCCCCCCEEEEEEEEEEEEECCCCCEEEEE
PIGIGLQGLETPVMDTRIGQKIPNPTWTPTAGIRQRSLERGITLPPVIPAGPNNPLGRYA
EEEECCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
LRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFAQVRTGTPVKVINQPVKFS
EEEEECCCCEEEECCCCCCCCCEEEECCEEEECCCHHHHHHHHHCCCCCHHHCCCCEEEE
VEPNGIRYVEVHRPLSPEEEQNVQTMPYVLPAEFTAFRNAQGVDSRLVDKALYRRAGYPV
ECCCCEEEEEEECCCCCCHHCCCEECCEECCCHHHHHCCCCCCHHHHHHHHHHHHCCCCE
SVSAGQTPAVNTTAVESAQNGFVGEEGQTRATQ
EECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097039 [H]