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The map label for this gene is sufD [H]

Identifier: 16764722

GI number: 16764722

Start: 1454917

End: 1456188

Strand: Direct

Name: sufD [H]

Synonym: STM1372

Alternate gene names: 16764722

Gene position: 1454917-1456188 (Clockwise)

Preceding gene: 16764721

Following gene: 16764723

Centisome position: 29.95

GC content: 53.77

Gene sequence:

>1272_bases
ATGGCTGGCTTACCGAACAGCAGTAAAGCGCTACAGCAATGGCAACATCTCTTTGAAGAAAAAGGAGAAAGTCGAACTGA
GCAGGCAAGACAACATTTACAACAGATGTTACGTCTGGGATTGCCGACGCGTAAACATGAAGACTGGAAATACACGCCGC
TGGAGGGCTTAACCCATAGCCAGTTTATCCAGCAGTGTGCGACTATCAGCGCCGCACAGCGTGATGCGTTGGCGCTGCAA
ATCGATGCCGTGCGACTGGTGTTTGTCGATGGTCGGTTTATGCCAGAGCTCAGTGATAGCACGCAAAACAGCGGATTTGA
CGTTAGCGTCAGGGATGAGCGCCAGGCGCTTGCCGCGCCGGTGCAGCCTGAGGTTTTTCTGCATCTGACGGAAAGCCTGG
CGCAATGTGTCACGTATATACAGGTACGGCGAAATCAGCGTCCGACGAGGCCGCTACTGTTAATGCATATCACGCAGGGT
GTGGATGGCGACGAGCTGAATACCGCGCATTATCGCCACCATCTGGCGCTGGCGGAAGGCGCGGAAGCGACGGTTATTGA
GCATTATGTCAGCCTTACAGCGGCAAAACATTTTACCGGCGCGCGTCTGACGATGAACGTTGCAGACAATGCGCAACTGC
GCCATTTCAAACTGGCGTTTGAAAATGCGTCCAGCTATCACTTTGCGCATAACGATCTTCTGCTGGCGACAGACGCCTCG
GCGTTTAGCCACAGTTTTCTGCTGGGCGCCGCAGTACTACGTCACCACAGCAGCTCACAACTGAATGGTGAAAACGCGAC
GCTTCGACTGAATAGTCTGGCGATGCCGGTGAAAAATGAAGTCTGCGATACGCGGACATGGCTGGAACATAACAAAGGCT
ACTGTAACAGCCGCCAGTTGCACAAGACCATCGTCAGCGACAAAGGACGCGCGGTCTTTAATGGCCTGATTAACGTGGCG
CAACACGCCATTAAAACCGACGGTCAGATGACCAATAATAACCTGTTGTTGGGGAAACTGGCCGAAGTCGATACCAAACC
GCAATTAGAGATCTATGCCGATGACGTGAAGTGCAGCCACGGCGCGACGATCGGGCGTATTGACGATGAGCAGATGTTTT
ATCTGCAATCACGCGGCATCAGGCAGCAGGAGGCGCGGCACATGATTCTTTACGCGTTTGCCGCAGAGTTAACGGAAGCT
ATCCATGATAGCGCCCTTAAACAGCAGGTGCTGGCGCGAATCGGCCAGCGACTGCCCGGAGGCCTGGTATGA

Upstream 100 bases:

>100_bases
CTGGACTACATCAAGCCCGATTACGTCCACGTCCTCTATCAGGGGCGAATTGTCCGTTCCGGCGATTTTACTCTGGTCAA
ACAACTGGAGGAGCAGGGTT

Downstream 100 bases:

>100_bases
CATTTCCTGTAGAAAAAGTACGGGCGGATTTTCCCATACTGCAGCGTGAAGTTAACGGCCTGCCGCTGGCTTACCTGGAC
AGCGCAGCCAGCGCTCAAAA

Product: cysteine desulfurase activator complex subunit SufD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MAGLPNSSKALQQWQHLFEEKGESRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFIQQCATISAAQRDALALQ
IDAVRLVFVDGRFMPELSDSTQNSGFDVSVRDERQALAAPVQPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQG
VDGDELNTAHYRHHLALAEGAEATVIEHYVSLTAAKHFTGARLTMNVADNAQLRHFKLAFENASSYHFAHNDLLLATDAS
AFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYCNSRQLHKTIVSDKGRAVFNGLINVA
QHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEA
IHDSALKQQVLARIGQRLPGGLV

Sequences:

>Translated_423_residues
MAGLPNSSKALQQWQHLFEEKGESRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFIQQCATISAAQRDALALQ
IDAVRLVFVDGRFMPELSDSTQNSGFDVSVRDERQALAAPVQPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQG
VDGDELNTAHYRHHLALAEGAEATVIEHYVSLTAAKHFTGARLTMNVADNAQLRHFKLAFENASSYHFAHNDLLLATDAS
AFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYCNSRQLHKTIVSDKGRAVFNGLINVA
QHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEA
IHDSALKQQVLARIGQRLPGGLV
>Mature_422_residues
AGLPNSSKALQQWQHLFEEKGESRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFIQQCATISAAQRDALALQI
DAVRLVFVDGRFMPELSDSTQNSGFDVSVRDERQALAAPVQPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGV
DGDELNTAHYRHHLALAEGAEATVIEHYVSLTAAKHFTGARLTMNVADNAQLRHFKLAFENASSYHFAHNDLLLATDASA
FSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQ
HAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAI
HDSALKQQVLARIGQRLPGGLV

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=421, Percent_Identity=79.0973871733967, Blast_Score=688, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 47357; Mature: 47226

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGLPNSSKALQQWQHLFEEKGESRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHS
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
QFIQQCATISAAQRDALALQIDAVRLVFVDGRFMPELSDSTQNSGFDVSVRDERQALAAP
HHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCHHHHHCCC
VQPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHLALAEG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCC
AEATVIEHYVSLTAAKHFTGARLTMNVADNAQLRHFKLAFENASSYHFAHNDLLLATDAS
CCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEECCCCCEEEECCCEEEEECCH
AFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYCNSRQL
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHH
HKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSH
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHCCCCCCCEEEEECCEECCC
GATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARIGQRLPG
CCEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GLV
CCC
>Mature Secondary Structure 
AGLPNSSKALQQWQHLFEEKGESRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHS
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
QFIQQCATISAAQRDALALQIDAVRLVFVDGRFMPELSDSTQNSGFDVSVRDERQALAAP
HHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCHHHHHCCC
VQPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHLALAEG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCC
AEATVIEHYVSLTAAKHFTGARLTMNVADNAQLRHFKLAFENASSYHFAHNDLLLATDAS
CCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEECCCCCEEEECCCEEEEECCH
AFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYCNSRQL
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHH
HKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSH
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHCCCCCCCEEEEECCEECCC
GATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARIGQRLPG
CCEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GLV
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 10322040 [H]