| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is katE [H]
Identifier: 16764669
GI number: 16764669
Start: 1397114
End: 1399366
Strand: Reverse
Name: katE [H]
Synonym: STM1318
Alternate gene names: 16764669
Gene position: 1399366-1397114 (Counterclockwise)
Preceding gene: 16764671
Following gene: 16764661
Centisome position: 28.81
GC content: 54.06
Gene sequence:
>2253_bases ATGTCGCATAATGAGAAATCCCCCCATCAGTCCCCCGTGCATGATACCCGTGAATCACAGCCCGGCCTGGACTCCCTGGC GCCGTCAGACGGTTCACATCGCCCCACGCCAGAAACGACGCCGCCGGGCGCGCAACCGACGGCCCCCGGCAGCTTAAAAG CGCCCGAGACCGCGAATGATAAGCTCACTGCCCTCGACGCCTTTCGTAAAGGCAGCGAAAATTATGCGCTGACCACCAAT CAGGGCGTGCGCATCGCCGACGATCAAAATTCTCTTCGCGCCGGCAGCCGCGGCCCTACGCTGTTGGAAGATTTTATCCT GCGCGAGAAAATTACCCACTTTGACCATGAGCGCATCCCGGAGAGGATCGTTCACGCCCGCGGATCTGCAGCGCACGGCT ATTTCCAGCCATATAAAGACCTGAGCGACATCACGAAAGCCGCGTTTCTGTGCGATCCACAGAAAATTACCCCGGTCTTT GTTCGCTTTTCGACAGTACAGGGCGGCGCGGGGTCTGCTGATACCGTACGTGATATCCGCGGTTTTGCGACCAAATTTTA TACCGAAGAGGGAATTTTCGATCTCGTCGGTAATAACACGCCGATCTTTTTTATCCAGGATGCGCATAAGTTTCCGGATT TTGTGCACGCCGTTAAGCCCGAACCACATTGGGCTATTCCGCAAGGGCAGAGTGCGCACGACACCTTCTGGGACTATGTT TCCTTACAGCCTGAGACGCTGCACAACGTCATGTGGGCAATGTCGGATCGCGGTATTCCACGCAGTTATCGGACGATGGA AGGGTTCGGCATTCACACCTTCCGTCTGATCAATGCACAAGGGAAAGCGACCTTTGTCCGTTTCCACTGGAAACCGTTGG CAGGTAAAGCCTCGCTGGTATGGGATGAGTCACAAAAACTGACCGGTCGCGATCCGGATTTTCACCGCCGGGATCTGTGG GAGGCCATCGAAGCGGGCGATTTCCCGGAATACGAGCTGGGCCTACAACTCATTGCCGAAGAGGATGAATTTAAATTCGA TTTTGATCTGCTCGATCCGACCAAACTGATTCCGGAAGAGTTGGTGCCAGTACAACGCGTCGGCAAAATGGTGTTAAACC GTAATCCGGATAACTTTTTCGCTGAAAACGAACAGGCGGCATTTCATCCAGGACATATTGTTCCCGGCATTGATTTTACC AACGATCCGCTGTTACAGGGGCGTCTGTTCTCTTATACCGACACGCAAATCAGTCGTCTGGGCGGGCCAAACTTCCACGA AATTCCGATTAACCGCCCTACCTGCCCCTACCATAACTTCCAGCGTGACGGTATGCACCGGATGGATATCGACACCAATC CGGCGAACTATGAACCAAACTCCATTAATGACAACTGGCCACGCGAAACGCCGCCAGCGCCAAAACGCGGCGGCTTCGAA TCATACCAGGAACGCGTGGATGGCAATAAAATCCGCGAACGCAGCCCCTCTTTCGGTGAATATTACTCGCATCCTCGCCT GTTCTGGCTCAGTCAGACGCCGATAGAACAGCAGCATATTATTGACGCGTTCAGCTTTGAACTGGGTAAAGTCGCCCGCG CGTATATTCGGGAGCGGGTGGTCGATCAGTTAGCGCATATTGATGTCACGCTGGCTCAGGGCGTCGCGCATAATCTCGGT TTTGCACTCACCCATGAGCAAACGCAAATTGCCCCGCCTCCTGATGTCAACGGTCTGAAAAAAGATCCGGCGCTCAGCCT GTATGCGGTGCCGGACGGCGATGTTAAAGGCCGAGTGGTCGCTATTCTGCTGAACGACAAAGTTAACGCCGCCGAACTGT TGACCATTTTGCAGGCTTTAAAAGCCAAAGGCGTCCACGCAAAACTGCTCTATTCACGGATGGGTGAAGTAACGGCTGAT GATGGTTCAACATTAACGATTGCGGCAACCTTTGCCGGCGCGCCGTCGCTAACGGTCGATGCGGTAATAGTACCGTGCGG CAATATTGCCGATATCGAGAGTTGCGGCGATGCCCGTTACTACCTTCTGGAAGCCTACAAACATCTGAAGCCCATCGCAC TGGCAGGCGACGCCCGACGGTTTAAGGCGCTTTTAAACATTGATAGCCAGGGGGAAGAAGGACTTGTTGAGGCAGATAAC GTTGACCACCACTTTATGGACACTCTGCTGACGCTGATGGCGGCACACCGTGTCTGGTCGCGTGCGGGGAAAATTAACGC GATTCCTGCATAA
Upstream 100 bases:
>100_bases TTCCGCTCTCCCCCAGCATAATTGCTGAAATGTTCTATAGTTAGAGTGATTTTGACTACTACCACGCCCATTTCAGTGAT GAAAGCAGGAGACGAGTTCA
Downstream 100 bases:
>100_bases ACAGCAAAAAATGCGGCGCATTCTTGCGCCGCAAACTCAGGAGCTAAATATCAAGAAAACTGCCAGGACGATATCCACGT TCCGCAATCGCTGCCTTGAG
Product: hydroperoxidase II
Products: NA
Alternate protein names: Hydroxyperoxidase II [H]
Number of amino acids: Translated: 750; Mature: 749
Protein sequence:
>750_residues MSHNEKSPHQSPVHDTRESQPGLDSLAPSDGSHRPTPETTPPGAQPTAPGSLKAPETANDKLTALDAFRKGSENYALTTN QGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQPYKDLSDITKAAFLCDPQKITPVF VRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYV SLQPETLHNVMWAMSDRGIPRSYRTMEGFGIHTFRLINAQGKATFVRFHWKPLAGKASLVWDESQKLTGRDPDFHRRDLW EAIEAGDFPEYELGLQLIAEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGIDFT NDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYHNFQRDGMHRMDIDTNPANYEPNSINDNWPRETPPAPKRGGFE SYQERVDGNKIRERSPSFGEYYSHPRLFWLSQTPIEQQHIIDAFSFELGKVARAYIRERVVDQLAHIDVTLAQGVAHNLG FALTHEQTQIAPPPDVNGLKKDPALSLYAVPDGDVKGRVVAILLNDKVNAAELLTILQALKAKGVHAKLLYSRMGEVTAD DGSTLTIAATFAGAPSLTVDAVIVPCGNIADIESCGDARYYLLEAYKHLKPIALAGDARRFKALLNIDSQGEEGLVEADN VDHHFMDTLLTLMAAHRVWSRAGKINAIPA
Sequences:
>Translated_750_residues MSHNEKSPHQSPVHDTRESQPGLDSLAPSDGSHRPTPETTPPGAQPTAPGSLKAPETANDKLTALDAFRKGSENYALTTN QGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQPYKDLSDITKAAFLCDPQKITPVF VRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYV SLQPETLHNVMWAMSDRGIPRSYRTMEGFGIHTFRLINAQGKATFVRFHWKPLAGKASLVWDESQKLTGRDPDFHRRDLW EAIEAGDFPEYELGLQLIAEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGIDFT NDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYHNFQRDGMHRMDIDTNPANYEPNSINDNWPRETPPAPKRGGFE SYQERVDGNKIRERSPSFGEYYSHPRLFWLSQTPIEQQHIIDAFSFELGKVARAYIRERVVDQLAHIDVTLAQGVAHNLG FALTHEQTQIAPPPDVNGLKKDPALSLYAVPDGDVKGRVVAILLNDKVNAAELLTILQALKAKGVHAKLLYSRMGEVTAD DGSTLTIAATFAGAPSLTVDAVIVPCGNIADIESCGDARYYLLEAYKHLKPIALAGDARRFKALLNIDSQGEEGLVEADN VDHHFMDTLLTLMAAHRVWSRAGKINAIPA >Mature_749_residues SHNEKSPHQSPVHDTRESQPGLDSLAPSDGSHRPTPETTPPGAQPTAPGSLKAPETANDKLTALDAFRKGSENYALTTNQ GVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQPYKDLSDITKAAFLCDPQKITPVFV RFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVS LQPETLHNVMWAMSDRGIPRSYRTMEGFGIHTFRLINAQGKATFVRFHWKPLAGKASLVWDESQKLTGRDPDFHRRDLWE AIEAGDFPEYELGLQLIAEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGIDFTN DPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYHNFQRDGMHRMDIDTNPANYEPNSINDNWPRETPPAPKRGGFES YQERVDGNKIRERSPSFGEYYSHPRLFWLSQTPIEQQHIIDAFSFELGKVARAYIRERVVDQLAHIDVTLAQGVAHNLGF ALTHEQTQIAPPPDVNGLKKDPALSLYAVPDGDVKGRVVAILLNDKVNAAELLTILQALKAKGVHAKLLYSRMGEVTADD GSTLTIAATFAGAPSLTVDAVIVPCGNIADIESCGDARYYLLEAYKHLKPIALAGDARRFKALLNIDSQGEEGLVEADNV DHHFMDTLLTLMAAHRVWSRAGKINAIPA
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family. HPII subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=423, Percent_Identity=45.6264775413712, Blast_Score=355, Evalue=6e-98, Organism=Escherichia coli, GI48994891, Length=750, Percent_Identity=88.8, Blast_Score=1389, Evalue=0.0, Organism=Caenorhabditis elegans, GI71998444, Length=443, Percent_Identity=46.5011286681716, Blast_Score=384, Evalue=1e-107, Organism=Caenorhabditis elegans, GI25151141, Length=506, Percent_Identity=42.0948616600791, Blast_Score=378, Evalue=1e-105, Organism=Caenorhabditis elegans, GI25147792, Length=494, Percent_Identity=42.1052631578947, Blast_Score=374, Evalue=1e-104, Organism=Saccharomyces cerevisiae, GI6320462, Length=368, Percent_Identity=45.6521739130435, Blast_Score=315, Evalue=1e-86, Organism=Saccharomyces cerevisiae, GI6321525, Length=367, Percent_Identity=41.6893732970027, Blast_Score=287, Evalue=5e-78, Organism=Drosophila melanogaster, GI17981717, Length=495, Percent_Identity=41.010101010101, Blast_Score=357, Evalue=1e-98, Organism=Drosophila melanogaster, GI19920968, Length=404, Percent_Identity=44.3069306930693, Blast_Score=341, Evalue=1e-93,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 83627; Mature: 83496
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHNEKSPHQSPVHDTRESQPGLDSLAPSDGSHRPTPETTPPGAQPTAPGSLKAPETAND CCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KLTALDAFRKGSENYALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIP CHHHHHHHHCCCCCEEEECCCCEEEECCCCHHCCCCCCCHHHHHHHHHHHHHHCCHHHHH ERIVHARGSAAHGYFQPYKDLSDITKAAFLCDPQKITPVFVRFSTVQGGAGSADTVRDIR HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHHHH GFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYV HHHHHHHCCCCCCEECCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHH SLQPETLHNVMWAMSDRGIPRSYRTMEGFGIHTFRLINAQGKATFVRFHWKPLAGKASLV CCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEEEECCCCEEEEEEEEEECCCCEEEE WDESQKLTGRDPDFHRRDLWEAIEAGDFPEYELGLQLIAEEDEFKFDFDLLDPTKLIPEE ECCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHCEEEEECCCCCEEEEECCCCHHHCHHH LVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGIDFTNDPLLQGRLFSYTDTQISRL CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHC GGPNFHEIPINRPTCPYHNFQRDGMHRMDIDTNPANYEPNSINDNWPRETPPAPKRGGFE CCCCCEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH SYQERVDGNKIRERSPSFGEYYSHPRLFWLSQTPIEQQHIIDAFSFELGKVARAYIRERV HHHHHCCCCHHHHCCCCHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH VDQLAHIDVTLAQGVAHNLGFALTHEQTQIAPPPDVNGLKKDPALSLYAVPDGDVKGRVV HHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEE AILLNDKVNAAELLTILQALKAKGVHAKLLYSRMGEVTADDGSTLTIAATFAGAPSLTVD EEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCEECCCCCEEEEEEEECCCCCCEEE AVIVPCGNIADIESCGDARYYLLEAYKHLKPIALAGDARRFKALLNIDSQGEEGLVEADN EEEECCCCCCCHHHCCCHHHHHHHHHHHCCCEEECCCHHHHHHHHCCCCCCCCCCEECCC VDHHFMDTLLTLMAAHRVWSRAGKINAIPA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SHNEKSPHQSPVHDTRESQPGLDSLAPSDGSHRPTPETTPPGAQPTAPGSLKAPETAND CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KLTALDAFRKGSENYALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIP CHHHHHHHHCCCCCEEEECCCCEEEECCCCHHCCCCCCCHHHHHHHHHHHHHHCCHHHHH ERIVHARGSAAHGYFQPYKDLSDITKAAFLCDPQKITPVFVRFSTVQGGAGSADTVRDIR HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHHHH GFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYV HHHHHHHCCCCCCEECCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHH SLQPETLHNVMWAMSDRGIPRSYRTMEGFGIHTFRLINAQGKATFVRFHWKPLAGKASLV CCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEEEECCCCEEEEEEEEEECCCCEEEE WDESQKLTGRDPDFHRRDLWEAIEAGDFPEYELGLQLIAEEDEFKFDFDLLDPTKLIPEE ECCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHCEEEEECCCCCEEEEECCCCHHHCHHH LVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGIDFTNDPLLQGRLFSYTDTQISRL CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHC GGPNFHEIPINRPTCPYHNFQRDGMHRMDIDTNPANYEPNSINDNWPRETPPAPKRGGFE CCCCCEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH SYQERVDGNKIRERSPSFGEYYSHPRLFWLSQTPIEQQHIIDAFSFELGKVARAYIRERV HHHHHCCCCHHHHCCCCHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH VDQLAHIDVTLAQGVAHNLGFALTHEQTQIAPPPDVNGLKKDPALSLYAVPDGDVKGRVV HHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEE AILLNDKVNAAELLTILQALKAKGVHAKLLYSRMGEVTADDGSTLTIAATFAGAPSLTVD EEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCEECCCCCEEEEEEEECCCCCCEEE AVIVPCGNIADIESCGDARYYLLEAYKHLKPIALAGDARRFKALLNIDSQGEEGLVEADN EEEECCCCCCCHHHCCCHHHHHHHHHHHCCCEEECCCHHHHHHHHCCCCCCCCCCEECCC VDHHFMDTLLTLMAAHRVWSRAGKINAIPA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1987146; 9097039; 9278503; 9144772; 7663946; 10091651; 11455600 [H]