| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is astB [H]
Identifier: 16764657
GI number: 16764657
Start: 1385917
End: 1387260
Strand: Direct
Name: astB [H]
Synonym: STM1306
Alternate gene names: 16764657
Gene position: 1385917-1387260 (Clockwise)
Preceding gene: 16764656
Following gene: 16764658
Centisome position: 28.53
GC content: 56.1
Gene sequence:
>1344_bases ATGACGGCGCATGAAGTTAATTTTGACGGGCTGGTGGGGCTTACGCACCATTATGCCGGGCTATCCTTCGGCAATGAGGC ATCGACCCGCCACCGTTTTCAGGTGTCGAATCCTCGTCTGGCGGTAAAACAGGGGCTGCTAAAGATGAAAGCTCTGGCGG ATGCCGGCTTTCCCCAGGCGGTGATCCCGCCGCATGAGCGACCTTTTATTCCGGCGTTGCGTCAGCTCGGCTTCACGGGT AGCGATGAGCAGATTCTGGATAAGGTTGCGCGTCAGGCGCCACGCTGGCTTTCCAGCGTGAGTTCCGCGTCGCCAATGTG GGTTGCGAATGCGGCGACGGTTTGCCCATCGGCAGACGCGCTGGACGGGAAAGTTCACCTGACGGTGGCGAATTTAAACA ATAAATTTCATCGCGCTCTTGAGGCGCCTGTTACCGAAGCGCTGCTACGCGCCATATTTCGCGATGAAAGCCAGTTTTCA GTGCATAGCGCGTTACCGCAGGTCGCATTATTGGGAGATGAAGGCGCGGCGAATCATAACCGTCTTGGCGGCGAGTATGG TTCGGCAGGCGTGCAGCTTTTTGTCTATGGGCGCGAAGAGGAGAATGAAATACGACCCGCTCGTTATCCGGCGCGCCAGA GCCGCGAAGCCAGCGAGGCCGTGGCGCGTCTTAATCAGGTGAATCCGCAACAGGTTATCTTCGCTCAGCAGAACCCGGAG GTCATCGATCAAGGCGTATTCCATAATGATGTCATCGCCGTTTCGAATCGACAGGTATTGTTTTGTCACGAAGCGGCGTT TGCCCGGCAGAAAGTGCTCATTAATCAGTTGCGTACGCGCGTTGACGGTTTTATGGCGATAGAGGTGCCCGCCGGCGAGG TTTCTGTATCAGATGCTGTGGCGACCTACCTGTTTAATAGTCAGTTGCTAAGCCGTAACGACGGCTTAATGCTGTTAGTG TTGCCGCGGGAATGTCAGGACCATGTCGGCGTCTGGCGCTATCTGAATAAGCTGGTGGCGGAGGATAACCCCATCAGCGC GATGCAGGTGTTTGATTTGCGAGAAAGTATGGCCAACGGCGGCGGCCCGGCCTGTCTGCGATTACGCGTGGTGTTAACAG AAGAAGAACGAAGGGCGGTGAATCCAGCGGTAATGATGAATGACGCTCTGTTTACGGCCCTTAACGCGTGGGCGGATCGT TATTATCGCGATCGCCTGACCGCTGCCGATCTGGCCGATCCGTTATTATTGCGAGAAGGCCGGGAGGCGCTGGATGTGTT AACGCGTCTGCTGGATTTGGGGTCGGTTTATCCTTTCCAGCAAACGGGGGCGGCTGATGGATAA
Upstream 100 bases:
>100_bases CCGATTATTGCGCCTGGCCGATGGCCAGTCTGGAATCTCCCGAACTAACGTTGCCTGCGACATTAAGCCCCGGCCTCGAC TTTTCTCGCAGGGAGGCGGT
Downstream 100 bases:
>100_bases CTTTCTGGCGTTGACGCTAAGCGGCACGACACCGCGGGTGACGCAGGGGAAGGGCGCGGGTTTTCGCTGGCGCTGGTTAG GCCATGGTCTGCTTGAACTC
Product: succinylarginine dihydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MTAHEVNFDGLVGLTHHYAGLSFGNEASTRHRFQVSNPRLAVKQGLLKMKALADAGFPQAVIPPHERPFIPALRQLGFTG SDEQILDKVARQAPRWLSSVSSASPMWVANAATVCPSADALDGKVHLTVANLNNKFHRALEAPVTEALLRAIFRDESQFS VHSALPQVALLGDEGAANHNRLGGEYGSAGVQLFVYGREEENEIRPARYPARQSREASEAVARLNQVNPQQVIFAQQNPE VIDQGVFHNDVIAVSNRQVLFCHEAAFARQKVLINQLRTRVDGFMAIEVPAGEVSVSDAVATYLFNSQLLSRNDGLMLLV LPRECQDHVGVWRYLNKLVAEDNPISAMQVFDLRESMANGGGPACLRLRVVLTEEERRAVNPAVMMNDALFTALNAWADR YYRDRLTAADLADPLLLREGREALDVLTRLLDLGSVYPFQQTGAADG
Sequences:
>Translated_447_residues MTAHEVNFDGLVGLTHHYAGLSFGNEASTRHRFQVSNPRLAVKQGLLKMKALADAGFPQAVIPPHERPFIPALRQLGFTG SDEQILDKVARQAPRWLSSVSSASPMWVANAATVCPSADALDGKVHLTVANLNNKFHRALEAPVTEALLRAIFRDESQFS VHSALPQVALLGDEGAANHNRLGGEYGSAGVQLFVYGREEENEIRPARYPARQSREASEAVARLNQVNPQQVIFAQQNPE VIDQGVFHNDVIAVSNRQVLFCHEAAFARQKVLINQLRTRVDGFMAIEVPAGEVSVSDAVATYLFNSQLLSRNDGLMLLV LPRECQDHVGVWRYLNKLVAEDNPISAMQVFDLRESMANGGGPACLRLRVVLTEEERRAVNPAVMMNDALFTALNAWADR YYRDRLTAADLADPLLLREGREALDVLTRLLDLGSVYPFQQTGAADG >Mature_446_residues TAHEVNFDGLVGLTHHYAGLSFGNEASTRHRFQVSNPRLAVKQGLLKMKALADAGFPQAVIPPHERPFIPALRQLGFTGS DEQILDKVARQAPRWLSSVSSASPMWVANAATVCPSADALDGKVHLTVANLNNKFHRALEAPVTEALLRAIFRDESQFSV HSALPQVALLGDEGAANHNRLGGEYGSAGVQLFVYGREEENEIRPARYPARQSREASEAVARLNQVNPQQVIFAQQNPEV IDQGVFHNDVIAVSNRQVLFCHEAAFARQKVLINQLRTRVDGFMAIEVPAGEVSVSDAVATYLFNSQLLSRNDGLMLLVL PRECQDHVGVWRYLNKLVAEDNPISAMQVFDLRESMANGGGPACLRLRVVLTEEERRAVNPAVMMNDALFTALNAWADRY YRDRLTAADLADPLLLREGREALDVLTRLLDLGSVYPFQQTGAADG
Specific function: Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)-succinylornithine, ammonia and CO(2) [H]
COG id: COG3724
COG function: function code E; Succinylarginine dihydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the succinylarginine dihydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1788041, Length=447, Percent_Identity=85.0111856823266, Blast_Score=794, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007079 [H]
Pfam domain/function: PF04996 AstB [H]
EC number: =3.5.3.23 [H]
Molecular weight: Translated: 49192; Mature: 49061
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAHEVNFDGLVGLTHHYAGLSFGNEASTRHRFQVSNPRLAVKQGLLKMKALADAGFPQA CCCCCCCCCCEEEHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCC VIPPHERPFIPALRQLGFTGSDEQILDKVARQAPRWLSSVSSASPMWVANAATVCPSADA CCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHCCCCCCC LDGKVHLTVANLNNKFHRALEAPVTEALLRAIFRDESQFSVHSALPQVALLGDEGAANHN CCCEEEEEEECCCHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCCCC RLGGEYGSAGVQLFVYGREEENEIRPARYPARQSREASEAVARLNQVNPQQVIFAQQNPE CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHEEEECCCCH VIDQGVFHNDVIAVSNRQVLFCHEAAFARQKVLINQLRTRVDGFMAIEVPAGEVSVSDAV HHHCCCCCCCEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHH ATYLFNSQLLSRNDGLMLLVLPRECQDHVGVWRYLNKLVAEDNPISAMQVFDLRESMANG HHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC GGPACLRLRVVLTEEERRAVNPAVMMNDALFTALNAWADRYYRDRLTAADLADPLLLREG CCCEEEEEEEEEECCHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHCC REALDVLTRLLDLGSVYPFQQTGAADG HHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TAHEVNFDGLVGLTHHYAGLSFGNEASTRHRFQVSNPRLAVKQGLLKMKALADAGFPQA CCCCCCCCCEEEHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCC VIPPHERPFIPALRQLGFTGSDEQILDKVARQAPRWLSSVSSASPMWVANAATVCPSADA CCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHCCCCCCC LDGKVHLTVANLNNKFHRALEAPVTEALLRAIFRDESQFSVHSALPQVALLGDEGAANHN CCCEEEEEEECCCHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCCCC RLGGEYGSAGVQLFVYGREEENEIRPARYPARQSREASEAVARLNQVNPQQVIFAQQNPE CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHEEEECCCCH VIDQGVFHNDVIAVSNRQVLFCHEAAFARQKVLINQLRTRVDGFMAIEVPAGEVSVSDAV HHHCCCCCCCEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHH ATYLFNSQLLSRNDGLMLLVLPRECQDHVGVWRYLNKLVAEDNPISAMQVFDLRESMANG HHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC GGPACLRLRVVLTEEERRAVNPAVMMNDALFTALNAWADRYYRDRLTAADLADPLLLREG CCCEEEEEEEEEECCHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHCC REALDVLTRLLDLGSVYPFQQTGAADG HHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA