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The map label for this gene is yaoF [H]

Identifier: 16764626

GI number: 16764626

Start: 1353820

End: 1354071

Strand: Direct

Name: yaoF [H]

Synonym: STM1275

Alternate gene names: 16764626

Gene position: 1353820-1354071 (Clockwise)

Preceding gene: 16764625

Following gene: 16764627

Centisome position: 27.87

GC content: 55.56

Gene sequence:

>252_bases
ATGAAATTTACGTGGATTGCGTTGCCAGGCGTATTGCTGCTGAGCGCTTGTTCATCGTCGCAACCCAACGCCCCCAGGCC
GCCGCGTATTGGGATGCCTAATCCGGCAGCCGTCTACTGTGAGCAACAGGGCGGTACGCTGATGCCGGTGCAGACCCCAC
AAGGCGTGCGTTCCGATTGCAAATTGCCCAATGGCGAAATCATTGATGAGTGGACATTATGGCGCAGAGAGCACCCTGAT
ACGAAAAAGTGA

Upstream 100 bases:

>100_bases
CTTAACCCGGGATAAACACCCACTAAAGCGCTGACAGAAAGTATGGAAATAGCGTACCCGCCAGGTTATCCTGGACAAAA
TATCGCTTTAAGGAGTCGTT

Downstream 100 bases:

>100_bases
CAACCTGCGGTCCGACGGGATATGATTAAGAACAATCTGATAATGAGTTTCATGCGGCGCAAGAAAATATGTTTCAGTTA
AAGCCGGGCGCGTTGGCAAT

Product: hemolysin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MKFTWIALPGVLLLSACSSSQPNAPRPPRIGMPNPAAVYCEQQGGTLMPVQTPQGVRSDCKLPNGEIIDEWTLWRREHPD
TKK

Sequences:

>Translated_83_residues
MKFTWIALPGVLLLSACSSSQPNAPRPPRIGMPNPAAVYCEQQGGTLMPVQTPQGVRSDCKLPNGEIIDEWTLWRREHPD
TKK
>Mature_83_residues
MKFTWIALPGVLLLSACSSSQPNAPRPPRIGMPNPAAVYCEQQGGTLMPVQTPQGVRSDCKLPNGEIIDEWTLWRREHPD
TKK

Specific function: Unknown

COG id: COG3042

COG function: function code R; Putative hemolysin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788094, Length=84, Percent_Identity=63.0952380952381, Blast_Score=115, Evalue=8e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005590 [H]

Pfam domain/function: PF03891 DUF333 [H]

EC number: NA

Molecular weight: Translated: 9214; Mature: 9214

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFTWIALPGVLLLSACSSSQPNAPRPPRIGMPNPAAVYCEQQGGTLMPVQTPQGVRSDC
CCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCC
KLPNGEIIDEWTLWRREHPDTKK
CCCCCCEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MKFTWIALPGVLLLSACSSSQPNAPRPPRIGMPNPAAVYCEQQGGTLMPVQTPQGVRSDC
CCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCC
KLPNGEIIDEWTLWRREHPDTKK
CCCCCCEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]