| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
Click here to switch to the map view.
The map label for this gene is yeaR [H]
Identifier: 16764622
GI number: 16764622
Start: 1351406
End: 1351768
Strand: Direct
Name: yeaR [H]
Synonym: STM1271
Alternate gene names: 16764622
Gene position: 1351406-1351768 (Clockwise)
Preceding gene: 16764621
Following gene: 16764623
Centisome position: 27.82
GC content: 49.86
Gene sequence:
>363_bases ATGCGGCAAATTCCACAAAATCATATTCATACACGTTCCACGCCATTCTGGAACAAAGAGACGGCGCCTGCCGGAATTTT CGAACGCCACCTTGATAAGGGAACGCGACCCGACGTTTATCCTCGTCTCTCGGTGATGCAGGGGGCGGTCAAATATCTCG GATACGCTGATGAACATTGCTCTGAGCCGGAAGAGATCATGGTGATCAATGCCGGCGAGTTTGGCGTGTTTCCTCCGGAA AAGTGGCACAATATTGAGGTCATGACGGATGATACCTATTTTAACATCGACTTTTTTGTCGCGCCGGAAGTACTGATGGA AGGGGCGACCTCACGAAAAGTCATTCATGCCGGGAGAGAATAA
Upstream 100 bases:
>100_bases GTAACCAATAAATGGTATTTAAAATACTGTTTTTGGAGCGTAACCTTTTTACGACAGCGATGAGATTATCGCTGAGTAAC CTGCGTGAAGAGGGAAGCAA
Downstream 100 bases:
>100_bases TAATGGGAAAAGCTACTTATACCGTCACGGTCACGAATAATAGCAACGGCGTCTCTGTGGACTATGAAACGGAAGCACCG ATGACGTTGCTGGTACCTGA
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MRQIPQNHIHTRSTPFWNKETAPAGIFERHLDKGTRPDVYPRLSVMQGAVKYLGYADEHCSEPEEIMVINAGEFGVFPPE KWHNIEVMTDDTYFNIDFFVAPEVLMEGATSRKVIHAGRE
Sequences:
>Translated_120_residues MRQIPQNHIHTRSTPFWNKETAPAGIFERHLDKGTRPDVYPRLSVMQGAVKYLGYADEHCSEPEEIMVINAGEFGVFPPE KWHNIEVMTDDTYFNIDFFVAPEVLMEGATSRKVIHAGRE >Mature_120_residues MRQIPQNHIHTRSTPFWNKETAPAGIFERHLDKGTRPDVYPRLSVMQGAVKYLGYADEHCSEPEEIMVINAGEFGVFPPE KWHNIEVMTDDTYFNIDFFVAPEVLMEGATSRKVIHAGRE
Specific function: Unknown
COG id: COG3615
COG function: function code P; Uncharacterized protein/domain, possibly involved in tellurite resistance
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788098, Length=119, Percent_Identity=83.1932773109244, Blast_Score=218, Evalue=8e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015392 - InterPro: IPR014710 - InterPro: IPR014510 [H]
Pfam domain/function: PF09313 DUF1971 [H]
EC number: NA
Molecular weight: Translated: 13790; Mature: 13790
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQIPQNHIHTRSTPFWNKETAPAGIFERHLDKGTRPDVYPRLSVMQGAVKYLGYADEHC CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHC SEPEEIMVINAGEFGVFPPEKWHNIEVMTDDTYFNIDFFVAPEVLMEGATSRKVIHAGRE CCCCEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEEEEECHHHHHCCCCCCEEEECCCC >Mature Secondary Structure MRQIPQNHIHTRSTPFWNKETAPAGIFERHLDKGTRPDVYPRLSVMQGAVKYLGYADEHC CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHC SEPEEIMVINAGEFGVFPPEKWHNIEVMTDDTYFNIDFFVAPEVLMEGATSRKVIHAGRE CCCCEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEEEEECHHHHHCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]